Wallemia ichthyophaga: J056_000359
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Entry
J056_000359 CDS
T03457
Name
(RefSeq) putative small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
wic
Wallemia ichthyophaga
Pathway
wic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
J056_000359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wic03019
]
J056_000359
03041 Spliceosome [BR:
wic03041
]
J056_000359
03032 DNA replication proteins [BR:
wic03032
]
J056_000359
Messenger RNA biogenesis [BR:
wic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
J056_000359
Spliceosome [BR:
wic03041
]
Complex A
U1 snRNP components
Sm proteins
J056_000359
U2 snRNP components
J056_000359
Complex B
U1 snRNP components
J056_000359
U4/U6.U5 tri-snRNP components
J056_000359
Complex C
U2 snRNP components
J056_000359
DNA replication proteins [BR:
wic03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
J056_000359
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
20373311
NCBI-ProteinID:
XP_009266032
UniProt:
R9ARV3
LinkDB
All DBs
Position
Unknown
AA seq
90 aa
AA seq
DB search
MSVQPVNPRPFLNDLTGKAVQVRLKWGLDYKGYLVSVDNYMNLQLANTEEFQNEKSNGAL
GEVFIRCNNVLWLKEAEEASNAAKDEEMQQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtccagccagtaaatccacgtccattcctcaacgatctcaccggtaaagctgtt
caagtgaggctcaagtgggggttggattataagggatatttggtttcggtggacaattac
atgaacttgcagctcgcaaacactgaagaattccaaaatgaaaagtctaatggcgcactc
ggagaggtctttatacgttgcaacaacgtactctggttgaaagaagcagaggaagcttca
aacgcagcaaaggatgaagaaatgcaacagtag
DBGET
integrated database retrieval system
