KEGG   Wallemia ichthyophaga: J056_000391
Entry
J056_000391       CDS       T03457                                 
Name
(RefSeq) WD repeat-containing protein 82-B
  KO
K14962  COMPASS component SWD2
Organism
wic  Wallemia ichthyophaga
Pathway
wic03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:wic00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    J056_000391
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wic03019]
    J056_000391
   03036 Chromosome and associated proteins [BR:wic03036]
    J056_000391
Messenger RNA biogenesis [BR:wic03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     J056_000391
Chromosome and associated proteins [BR:wic03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     J056_000391
    COMPASS/SET1 complex (yeast)
     J056_000391
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 ANAPC4_WD40 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st WDR90_beta-prop_4th KNTC1_N Ly-6_related
Other DBs
NCBI-GeneID: 20373343
NCBI-ProteinID: XP_009266064
UniProt: R9AQY0
LinkDB
Position
Unknown
AA seq 346 aa
MSTLTLSSDLMKSFKPCKAFTGYCQEDKDITALSFDDTGSTCVTASSDDTIHLFDTKLGK
HQKYFRSGKYGVDLPCFTHSSSTIIYASTKQDNSIKYHSLHDNSYLQYYRGHQGKVNSLE
MSPTDDMFLSASSDDTVRLWDLRTPQCQGLLHIKGNSIAAWDPSGLCFAVSLYSESMILL
YDKGRYDQAPFATFALRDRDHRGRDIRPHPTCIKFSSNGNYILVGTNSPYHYILDSFSGQ
IYYRLTGHETFTSVNIQRDMLSWSPDGKFVVGGSKNGKIHVWEVPPTEPRDAAIKTLSPI
HTTDNHKNTPSKIVAFNPRVVMLATAASSELAFWLPMQDSRRSSHN
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgtccacattgacgctcagttcagatttgatgaaatcattcaagccttgcaaggctttc
accgggtattgccaggaagacaaggacattactgctctgtctttcgatgacactggcagc
acctgcgttacggcttcctcagacgataccatacatctctttgacacaaagctgggaaaa
caccagaagtacttcagaagcggtaaatatggcgtggatttgccttgcttcacccattca
agctcaacgattatatatgcatccaccaagcaagacaactctataaaataccacagcttg
catgataatagctacctacaatactacagaggccaccaaggtaaagttaactccctcgaa
atgagtccgacagacgatatgttcttatcggcatcgagtgatgatactgtgaggctttgg
gacttacgcacccctcaatgtcaagggttgcttcacattaagggcaactctatagccgcg
tgggatcctagtggtctttgttttgctgtctccctttactcagaatccatgatcctcctc
tacgataagggtaggtatgaccaggctcctttcgccacttttgctctcagggacagagac
cacagaggcagggatatccgtcctcaccctacttgcatcaaattttcatcaaacggcaat
tacatcctcgtcggtacaaactccccctatcattacattttggattctttttctggccag
atttattacagactaaccggacacgaaacctttacgagcgtaaatatccagcgagacatg
ctgagttggtcgcctgatggaaaattcgtcgtcggcggttctaaaaatggtaagattcac
gtttgggaggtaccaccgactgaaccgagagatgctgccatcaagacactctccccaata
cacaccactgataatcataaaaacactccaagtaaaattgtcgctttcaatcctcgcgtt
gttatgctcgcgactgctgcttcatctgagttagccttttggctgccaatgcaggacagt
cgccgtagcagccataattag

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