Wallemia ichthyophaga: J056_000717
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Entry
J056_000717 CDS
T03457
Name
(RefSeq) Clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
wic
Wallemia ichthyophaga
Pathway
wic04142
Lysosome
wic04144
Endocytosis
wic05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
J056_000717
04142 Lysosome
J056_000717
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
J056_000717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
wic04131
]
J056_000717
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
wic04147
]
J056_000717
Membrane trafficking [BR:
wic04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
J056_000717
Exosome [BR:
wic04147
]
Exosomal proteins
Proteins found in most exosomes
J056_000717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
DFF40
DUF1720
Motif
Other DBs
NCBI-GeneID:
20373669
NCBI-ProteinID:
XP_009268620
UniProt:
R9AE90
LinkDB
All DBs
Position
Unknown
AA seq
1700 aa
AA seq
DB search
MAERPIQFSEHLQLTALGINPASISFQTLTMSSDKFICVREGDGGATPKQVVIVDLNDIN
NVIRRPISADSAIMHPDRKLIALKAGKQLQLFNLELKQKVKSHLSNDDVVYWSWLNQSTL
GLVTDSSVFHWDIDAIGENAPVKVFDRHPNLAGSQIINYRSTEDGKWMALIGIASNSNPD
GFRIKGAMQLYSRDRGVSQPIEGHAAAFSELKLDGNANPSKLFAFAVRTGSGAKLHIVEI
DYQSGQTPYTKKAIDVFFPAEAATDFPVAMQISKKYGIIYLITKFGFVHLYDIENGACIY
MNRISGDTVFVTAEHEATDGLIGVNRKGQVLSVSIDENTVIPYILSTLNNVELAFKLASR
GNLPGADDLYLAQYQNLMANQQYNDAAKIAANSPRGILRTPTTIEQFKSLPAVPGQLSPI
LQYFGILLEKGELNKFESLELSRPVLQQGRKQLLEKWLKENKLECSEELGDIVRLHDMTL
ALSIYLRANIPNKVVASFAETGQFNKILVYSQKVNYTPDYALLMQHIVRVNPDQAAEFAS
QIVNDEAGPKIDIERVVDVFLGQNLIQQATSFLLDALKENKPEQGHLQTRLLEINLINAP
QVADAILGNAMFTHFDHPRIANLCEKAGLLQRALELYQDTNDLKRVVVHTPLLNQEWLVN
YFGQLTVDQTFACLNEMLKVNIRQTLPMVVQIATKYSELLGSHKLIELFENFKTFEGLYY
FLGSVVNLSEDSEVHFKYIQAATRTGQIREVERIVRESNFYNPEKVKNFLKEVKLPDQLP
LIIVCDRYDYVHDLVLYLFQNGLTQFISTYVQQVNSARLPQVVGGLLDVDCDEQTIKNLL
SSVYGLFDVNELVDEVEKRNRLKLILPWLEGRINAGQEDAAIYNALAKIYIDSNNNPEHF
LKENNIYEPLVVGKYCEKRDPYLAFIAFAKGFCDDELIAITNENGMYKHQARYLVKRRDL
DLWAQVLNDVNEHRRLLIDQISAVAIPESQNPDDVSVAVKAFMTAGLQQELVDILEKIIL
NPTSFSDNGSLQNLLLLTAIRSDQGRVMNYINKLHNYDFNEIAKIAIDNDLHEEAFTVYK
KHEAHLEALIVLVEHIVSIDRAFDYTKKINEPPLWARLAKAQLDGLRITDAIESYIKAND
PSNFVEVIEMSERAEKHEDLVRYLQMARNTAREPKIDSTLVYCLCKTDRLQDAEDFLHMT
NVADVLEVGEKCFNDGLYLAAKVLFTSISNYARLATTLIYLEDNQAAVECARKAGNTQVW
KQVCLACVDKEDFKLAKICGLNLIVHPEELQAIISLYESRGLFQEMLDLFEAGLGLERAH
MGLFTETAIAYAKYQPESMFEHLKLYGSRLNIPKVIKSAKEGHLWRELVYLYIAYAEWDN
AALNTIEHSADAWDHQQFRDVLSKVANAEIFYKALSFYQEQHPTLLTDLLTALISRIDHS
RVVSMFRQSDNLPLVRAYLIAVQNLDVAAVNEAVHDLLIEEEDYQTLLDVIDQYQSFDQL
GLAARLEQHELLAFRRIAAHLYKVNKKYEESINLSKSDKLYVDAIQTASTSEDVQVSEDL
LTYWVDIGNKELFTAHLYLCFKLVRPDIVEELAWFNGLEDFAKPYQFELRRQTQDRIKAL
EKKVQEQATKSAKKEEDEDSQPIMGPGFNQTLMIGGPSGWNGANGVTPQQTGLMPQGTGM
MPQGTGMMPQATGYQGGFGY
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcgccccatccaattctctgaacatttacaactcactgctctgggtatcaac
cccgccagcatcagcttccagacactaaccatgtcctctgacaagttcatctgtgtccgt
gaaggcgatggtggggcaactccaaagcaagtcgttatcgtcgatctcaacgacatcaac
aacgttatcagaaggcctatatctgctgattctgctattatgcatccagatagaaaactc
atcgcgttaaaagcaggtaaacagctacagcttttcaaccttgagcttaagcagaaagtc
aaatctcacctctcaaacgatgacgtcgtctactggtcctggttgaatcaatccactctg
ggtcttgtcactgattcatccgtttttcactgggatatcgatgctatcggtgaaaatgcc
cctgtcaaagtttttgatcgtcatccaaatctcgccggttcccaaattatcaactataga
tccactgaagatggtaaatggatggccctcattggtattgccagcaactccaacccagac
ggctttcgcatcaagggcgcaatgcagctttactcacgtgatagaggcgtttctcaacca
atagaaggtcacgctgctgccttctctgaactaaaactcgatggaaacgcaaacccttcg
aagctcttcgctttcgctgtccgtactggctcaggcgccaaacttcacattgtcgaaatt
gactaccaaagtggtcaaacgccatacacaaagaaagctatcgatgtctttttccccgcc
gaagctgcaacggatttccccgtcgcaatgcaaatatccaagaaatacggcatcatctat
ttgattacaaagtttggctttgttcatctctatgatatcgaaaacggtgcttgcatctac
atgaatagaatttctggtgataccgtctttgtcactgctgaacacgaagccacagatggt
ttgattggtgtaaatagaaagggccaagttttatccgtttcaattgacgagaataccgta
attccttacattcttagcactctcaataacgttgagttagcattcaagctcgcaagtcgt
ggaaaccttccaggtgctgatgacttgtatttggctcaataccagaatctcatggctaac
caacaatacaatgatgctgccaagatcgctgctaactctccacgtggcattcttcgtacc
ccaaccaccattgaacaattcaagtctcttccagctgtaccaggtcaattatcgcctata
cttcaatactttggtatccttttggaaaagggcgagctcaacaagtttgaatcacttgag
ctttctcgtcctgttcttcagcaaggtcgcaagcaactcctcgaaaagtggttgaaagag
aataaattggagtgttctgaggagcttggtgatattgtccgcttgcacgacatgactctt
gctctgtcaatttacttacgcgcaaacattccgaacaaagttgttgcaagctttgcagag
actggtcaattcaacaaaattctcgtctactctcaaaaagtcaactacacgccagattac
gctttgttgatgcagcacattgtccgcgtcaacccagaccaagctgccgaatttgccagt
caaattgtcaacgatgaggctggtccaaaaattgacattgagagggtggttgatgttttc
cttggtcaaaatctcatccagcaagctacttccttcttactggatgctcttaaggaaaac
aagccagagcagggtcacttacagactcgcttgttagagattaatctcatcaacgctcct
caagtagccgatgctattcttggaaatgccatgtttactcactttgatcacccacgcatc
gcaaacttgtgtgaaaaagctggtttacttcaacgtgcattggagttataccaagatacc
aatgacctcaagcgtgttgtcgtacatactccattgctcaatcaagaatggctcgtaaat
tacttcggtcaattgaccgttgatcagacctttgcttgtttgaatgaaatgctaaaggtg
aacatcagacaaacgcttccaatggttgttcaaattgctacaaagtacagcgaactgctt
ggatctcacaagctcatcgagttgtttgaaaatttcaagacatttgaaggtctttactac
ttcctcggatcagttgttaacttaagtgaagactctgaagttcacttcaagtatattcaa
gctgctactcgtaccggtcaaattcgtgaagttgagagaattgttcgtgaatccaacttt
tacaatccagaaaaagtcaaaaacttcctgaaagaagttaagcttcctgatcagcttcct
cttatcatcgtttgtgacagatatgactacgtccacgatctcgttctctatctcttccaa
aacggactcacacagttcatttctacatatgtacagcaagtcaactcagctcgtttacct
caagttgtaggtggattgttagatgttgattgtgatgagcaaaccatcaaaaacttgctc
tcatctgtctatgggttgttcgatgtcaacgagctcgttgatgaagttgaaaagcgtaac
cgccttaaattgatccttccttggcttgaaggacgcatcaacgctggtcaggaagatgct
gctatttacaatgctttggccaagatctacattgacagcaacaacaatccagagcatttc
ttgaaagagaacaacatttatgaaccactcgttgttggcaaatattgtgagaagcgtgat
ccatacctcgctttcattgccttcgctaagggattctgcgatgacgagttgattgctatc
actaatgaaaatggcatgtacaagcaccaagcacgctatctcgtcaagcgtcgtgatctc
gatctttgggctcaagttctgaacgatgtcaacgaacaccgtcgtttactcatcgaccaa
atatcggcagttgctattccagaatcgcaaaacccagatgatgtttctgttgcagtgaag
gcatttatgaccgctggtctgcagcaagagctcgttgatattctcgaaaaaatcattctc
aacccaacttcattcagcgacaacggtagcttgcagaacttgctcttgttaactgcaatc
agaagtgatcaaggtagagtgatgaactacatcaacaagcttcacaactacgactttaac
gagattgccaagattgcgattgacaatgacttgcacgaagaggctttcacagtatacaag
aagcacgaagctcatctcgaagcacttatcgttctcgtagagcatatcgtctctatcgac
cgtgcctttgactacacgaaaaagattaacgagccacctctctgggctcgtcttgccaaa
gctcaactcgacggtttaagaattacagatgcgattgagtcttacatcaaggcgaacgat
ccatccaactttgtggaagttattgagatgtcagagcgtgctgagaagcatgaggacttg
gtcagatatttacaaatggcacgtaacacagctcgcgagccaaagattgactctactctt
gtctactgtctttgcaagacggacagacttcaagacgccgaagacttcctccacatgacc
aatgttgctgacgtacttgaagtcggtgagaagtgtttcaacgacggtctttacttggca
gccaaggttctcttcacctctatctccaattacgctagattggcgacgacactcatttac
ctcgaagacaaccaagctgcagttgagtgcgctcgtaaggcgggcaatacacaagtgtgg
aagcaggtctgtcttgcttgtgttgataaggaagacttcaaattggctaagatttgtggt
cttaatttgattgttcacccagaagagctccaagctatcatttcactttacgagtctcgc
gggttattccaagaaatgctcgatctctttgaggctggtcttggtctcgagcgtgcccac
atgggtctcttcaccgagactgccattgcatacgctaaatatcaaccagagagcatgttt
gagcatctgaagctttacggctctcgtctcaatattcctaaggtcatcaagtccgctaaa
gaaggacacctctggagagagcttgtttatctttacattgcgtacgctgagtgggataac
gctgcactcaacactatcgagcacagcgctgatgcatgggaccaccaacagttccgtgat
gtactcagcaaggttgcaaatgctgagatattctacaaagcactttcattttatcaggag
cagcacccaacgcttctgacagaccttttaacagctctcatttcacgtatcgatcactcg
agagtagtgtcaatgtttagacaatcagacaacttgccattggtacgagcatacttgatt
gcagtgcagaacttggatgttgcagctgttaatgaggctgttcatgatttgttgattgaa
gaggaagactaccagacgctattggatgttattgatcaataccaaagcttcgatcagctt
ggtttagctgcaagattggaacagcatgagctgttagcttttagaagaatagcagcacat
ctttacaaagtcaacaaaaagtacgaagaatctatcaacctctctaagagcgataagctt
tacgtcgatgctatacagaccgcatctacaagtgaagatgttcaggtatcagaagattta
ttgacttattgggttgatattggcaacaaagaactcttcaccgctcacttatacctttgc
tttaagctggtgagaccggatatcgtcgaggagttggcgtggttcaatggactcgaagac
tttgctaaaccatatcaatttgagttgaggagacagactcaagatcgtatcaaagcactt
gagaaaaaggtccaagagcaggctactaagtctgccaagaaggaggaagatgaagattca
cagccaattatgggaccaggatttaatcaaacgctcatgattggtggtccatcaggatgg
aatggtgctaacggggtgactcctcaacaaacaggtctgatgcctcaaggtactggcatg
atgccacagggcaccggtatgatgcctcaagcgactggatatcaaggaggttttggatac
taa
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integrated database retrieval system
