Wallemia ichthyophaga: J056_000906
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Entry
J056_000906 CDS
T03457
Name
(RefSeq) General negative regulator of transcription subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
wic
Wallemia ichthyophaga
Pathway
wic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J056_000906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wic03019
]
J056_000906
Messenger RNA biogenesis [BR:
wic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
J056_000906
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
J056_000906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
20373858
NCBI-ProteinID:
XP_009268809
UniProt:
R9ADX4
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MNPPNLPFRPPYAPYLAAPHVLRGFAPIQQQQQQRQSFNQPSLTPNSNPRQNSFPYAGPS
PVTAAQAHPINNNSSNQSQLLNVGVIPSQSEPRLDPNDFPALGAPTQQSQQQQNHYSQPT
APSALNQDEFPALSSDQSSLNGVQPKSSESIRQPYFPSNTSRTPAPASASNAASQRDKRN
FMFEMTAAQNPNAQQPNLPMAQTPAQQVLVSPADRFGLLGLLNIIRMSSSDMGMLALGSD
LTNLGLDLSSPTMLNSTFVSPFSDNNARDAATLEPEFTLPACYNVQPPPPAFTKVAEFHD
ETLFYIFYTHAKDVMQQVAAIELFNRNWRYHKDLGLWLTKESGSEPVQKTPMLERGSYIF
FDPKSWEKIKPGGKVSSNLSNESASAAPVAPSTVQPPSIAAN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctccaaatcttccttttagacctccttatgcgccgtatttagcagcgccacac
gtattgcgaggtttcgcgcctatccagcagcagcaacaacagaggcaaagctttaatcag
ccaagcttgacgcctaattctaatccgaggcaaaattcgttcccctacgcaggtccttct
cccgtgacagctgcacaagctcatccaatcaataacaacagcagtaatcaatcgcagttg
ctcaatgtcggcgtgatacctagccagtcagaacctaggctcgatccaaatgatttcccc
gctttaggtgctcctactcaacaaagtcagcagcagcaaaatcattattcccagcctaca
gctccctcggctctaaatcaggatgaatttcctgctctttcttctgatcagagtagtcta
aacggtgtacagcctaaatccagtgaatctatacgacagccatacttcccttccaacact
tcgaggacacccgcacctgcatctgcttcaaacgcagcttcacagagggacaaaagaaat
ttcatgttcgaaatgaccgctgcacaaaatccaaacgcccaacaacccaatctacctatg
gctcagaccccggctcagcaagtgctagtatcgcctgctgacaggtttggattgttagga
ttgttgaacataataagaatgtcgtcgtctgatatgggaatgctggctttgggatctgat
ttgacaaatcttggactggatttgagctctccgacaatgcttaactcgacgttcgtgtca
ccattttccgacaacaatgccagagatgcagctacactagaaccagagttcacactacct
gcttgttacaacgtccaaccaccaccaccagcattcaccaaggtcgcagaattccacgac
gaaaccctcttctacatattctacactcacgcaaaggatgtaatgcagcaagtagcagca
attgaattattcaacagaaactggagatatcacaaggatttaggactttggttgactaaa
gaatccggatctgagccagtgcagaagacaccaatgcttgaacgtggtagctatatcttc
ttcgatccaaagagctgggagaagataaagcctggtggtaaagtgagcagtaacctctcc
aacgaatctgcttcagcggctccggtagcgcctagcacagtgcaacctccatcgatcgca
gcaaactaa
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