Wallemia ichthyophaga: J056_001109
Help
Entry
J056_001109 CDS
T03457
Name
(RefSeq) SWI/SNF chromatin-remodeling complex subunit snf5
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
wic
Wallemia ichthyophaga
Pathway
wic03082
ATP-dependent chromatin remodeling
wic03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
J056_001109
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
J056_001109
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
wic01009
]
J056_001109
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wic03021
]
J056_001109
03036 Chromosome and associated proteins [BR:
wic03036
]
J056_001109
Protein phosphatases and associated proteins [BR:
wic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
J056_001109
Transcription machinery [BR:
wic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
J056_001109
SWI/SNF complex
J056_001109
Chromosome and associated proteins [BR:
wic03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
J056_001109
PBAF complex
J056_001109
SWI/SNF complex
J056_001109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
GATA
Motif
Other DBs
NCBI-GeneID:
20374061
NCBI-ProteinID:
XP_009269012
UniProt:
R9ADI5
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MQRHNIDENNRQSVISWDIKDDSYVQHLGRDTQRYSNIAKSSVKQHSIDNYNELKPSYQW
FERPDKDNPLEFDSKVKLLYPKDSNDLVDQLRSKMSISSPIRLHKFHYKDAAQVNEELVP
IRLDFDLDYLKLKEVFCYNLKEPHLSPKLLAVSLCHDFGLNEVTAAHLIEKSINDQLDEW
KSFVHEYSSIHSPSTSTNTQGTLNNSDCEWWQAFKDNNIPEKYDDQVKSVKDEKFIHEDI
RILIKLDIIHTPHHLIDQFEWPLFTTLQPNAPELFAVNFAAEMGLPGEFVTSISHNIREQ
SSFYLKSLSRLNYPILNGNSVEGIPDDELRKSFLPHLSEHSIERSTKDSIDHTPKLDLLS
HEDIINYEKELEKESKRRKRAQRNRRSNLTLLPQDREPIKTYRTPPKFPETFISVPHSFL
KEQPIAINQQTQQNQQLSTNYPRRAAAAKASLNISSSAQAELAEIDNNAEDEDYGADDSQ
FDNFTSTMEFDEHENKYVKKPMQLQPFDQSKMAITKRPRFIENIPTKLEYTPTSRLRPDA
KIFVSNQEKPNNLMKFGHGKAFRGELSPGTEVKKLSAATLSIYSYFSTENQHENMINGVW
HCSNCGVPEMFAIGRRKGPMGDKSLCGDCGKYLHKIRKNKPVIYNNDIEYHRNLRLQVEK
EAEERLNNQKTNAQRYRKELKASRQAQKVAKEAEHLDYYSQNKRKQIIDDSDEDDSFDFG
KRNKHKSYDDDDDDESYNEDDDSAPSRPQRVRKVPSHQARSPSSSQSEANGDTTRLSVDR
PTRQSASTPQWLTDAARLLRHRYPNDRFVIIDKPPQSADGSPEWRIKCLDCPGKMYTPGP
GLNVENFEKHLKNRQHKQKVGIRLGFPMGNNGISPIGQPSVLSPSQPVISPISHPLQLQS
QPASRPPSSQQQHPQHVQHQQHLKASPMYPTMGMPMSQSPAQQTDVLAAAMYQSHSQNLN
HGHHSIPHSQSITPQPQPPPIHHQPQSSIHAMQEAPTQSQHHHLYNHQQFVNIPHETARP
AESIPSSLDISSMDMNLIGMPSFDFESGIGGNEHAGSGTY
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagacataatattgatgaaaataatagacaaagtgtgattagctgggatattaag
gacgattcctacgttcagcacttgggtcgtgatacgcaacgatactcaaatatcgcaaaa
agctcagtcaaacaacattctatcgataactacaatgagcttaagccaagctatcaatgg
tttgaaagaccagataaggataatccacttgaatttgatagcaaagttaaactactctat
ccgaaggattcaaatgacttggtcgatcagttaaggtccaaaatgtctatctcctcacca
attagacttcacaaatttcattacaaagacgcagctcaagttaatgaagaattagttcct
ataagacttgatttcgacttggattacttgaaattgaaggaagtcttttgttacaacctc
aaagaacctcatctctcaccaaaattattggctgtttcattatgtcacgatttcggttta
aatgaggttaccgctgctcatctgattgaaaaatccataaatgatcaactcgatgaatgg
aaatctttcgtacatgaatactcatcgatacacagtccatcaacctccaccaatactcaa
ggtacgctcaataactccgactgtgaatggtggcaagctttcaaggacaacaatataccc
gagaaatacgatgatcaagtcaaatccgtaaaggatgagaaattcatccacgaagatatc
agaattctaatcaagttggacattattcacacccctcatcacttgatcgatcaatttgaa
tggccacttttcacaacccttcaaccaaacgcgccagagttattcgcagtgaattttgct
gcagagatgggcttgccgggtgaattcgtcacttcaatatctcataatatacgagaacaa
tcctcattctacttgaaatctctctcaaggttgaattacccaatacttaacggaaattca
gttgaaggaataccagatgacgagttgcgcaagtcattcttaccacatttgtcagagcat
tcaatcgaacgttcgaccaaagatagtatagatcatacgccgaagttggacttgctttca
cacgaggacataatcaattacgaaaaagagttagaaaaggagagtaaaaggagaaaaaga
gcacagagaaataggagatcaaatctgacacttcttccccaagacagagagcctatcaaa
acttacagaactccgccaaagttcccagagactttcatatctgttcctcactcattcctt
aaagagcaaccaatcgctatcaaccagcaaacccaacagaatcaacaattgtctaccaac
tatccacgaagagcagctgcagctaaagcaagcttgaacatttcttcatcagctcaagcc
gagttggcggaaatagataacaacgcagaagatgaagattatggtgcagacgatagtcaa
ttcgataactttacgtcaactatggaatttgatgagcatgaaaataaatatgttaagaaa
cctatgcagttacaacccttcgatcaatcaaagatggctatcacgaaaagacccagattc
attgaaaatattccaaccaagcttgaatacacacctacatctaggttgagaccagatgca
aagattttcgtttcaaaccaagaaaaaccaaacaatttaatgaagtttgggcacggtaaa
gcttttagaggagaattgtcgccgggaactgaagttaagaagctatcagcggctactttg
agcatatattcttatttctccactgagaatcaacacgagaacatgatcaatggagtatgg
cactgttcgaattgtggtgtacctgaaatgttcgccattggtcgtaggaaaggacctatg
ggtgataagagtttgtgtggggattgtggaaagtatttgcataaaatacgcaagaacaag
cctgtcatttacaataatgatattgaatatcatcgtaatctacgcttgcaagtggaaaaa
gaggctgaagagagacttaataaccaaaaaactaatgctcaacgctatagaaaagaactc
aaagcttcaagacaagcccagaaagttgcgaaagaagctgagcacctagattattacagt
caaaacaaacgcaagcaaatcatcgatgatagtgatgaagatgatagcttcgattttggc
aagcgcaataaacataaatcttatgatgacgacgacgatgatgagtcgtataacgaagat
gatgacagcgcaccatcacgtccacaacgggttagaaaagtaccatcacaccaagcaagg
tcaccatcaagtagtcaatctgaagctaatggtgatacaacgaggctgtcggtagatagg
ccaacacgtcaatcggcatcaactccacaatggttaacagatgcagcgcgcttacttagg
catcggtatcccaacgatcgattcgttataatcgacaagccaccacaaagcgctgacgga
tctccagaatggcgtataaaatgtcttgattgtccaggaaagatgtacactccaggccca
ggtttgaatgttgagaatttcgaaaagcacttaaaaaatcgtcaacataagcagaaggtt
ggaatacgattaggctttccgatgggcaataacggtatcagtccaattggacagccaagt
gtactcagtccaagtcaacctgtgataagtccaatttctcatccattacagttgcaatca
cagcctgcatctagaccaccatctagtcaacagcagcatcctcaacacgtgcaacaccag
cagcacttgaaagcgtcaccaatgtacccaacaatgggtatgcctatgtctcaatcacct
gcacagcaaactgatgtattggctgctgctatgtatcaatctcattcgcagaacctcaac
catggacatcattcaattccacattcacaatcaattacaccgcaaccccaaccgccacca
atccatcatcaaccacagtcatctattcatgcaatgcaagaagcacctacacagtctcaa
catcatcacctatacaaccatcaacaatttgttaatatccctcacgaaacggcaagacct
gcagagtcaataccaagcagtctagacatatccagtatggatatgaatttgattggaatg
ccttccttcgattttgaaagtggtattggtggtaatgagcatgctggttcaggcacttac
taa
DBGET
integrated database retrieval system
