Wallemia ichthyophaga: J056_001160
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Entry
J056_001160 CDS
T03457
Name
(RefSeq) Chromodomain helicase hrp3
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
wic
Wallemia ichthyophaga
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wic03021
]
J056_001160
03036 Chromosome and associated proteins [BR:
wic03036
]
J056_001160
Transcription machinery [BR:
wic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
J056_001160
Chromosome and associated proteins [BR:
wic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
J056_001160
SLIK complex
J056_001160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
CHD1-like_C
HTH_Hrp3
Chromo
ResIII
HDA2-3
Cdh1_DBD_1
CDH1_2_SANT_HL1
Motif
Other DBs
NCBI-GeneID:
20374112
NCBI-ProteinID:
XP_009269063
UniProt:
R9ADL6
LinkDB
All DBs
Position
Unknown
AA seq
1405 aa
AA seq
DB search
MADHTDMKMDMGDNSSSSGDAEGESDAPLNQQGAVPAPIEDEPLDAADKIDLNYVDPDLY
GLRRSGRSAKNQSMDPTYLDEFLDDDEDDYDESPKRKSRKGGGGSKRRAANREAPPPRFD
ESSEDEYFTSVTSKKRQRTKQRAQSSDEDDSLDDDDEAGAFRASSRGNNGVRNYNEEAIA
GFETDESERFEADTVPVEEPKVGDKPSEYEIETVFGHSRDATNSPDEDDDPYENIRFHIK
WRGFSHHHNTDETYEFLKRCKGIKRVDNYIKNIYNYQHEIYRHREQNKEDFEIVEMEKER
LRDLVDMYRKVERILDQRDSGTTTEYFCKWTGLQYSECTWEKHDDVVQYAPEQIDAYLLR
TASTTLPNRSANYNRSRPAFRTLMESPNYIQSTGGELLDYQMTGLNWLAYLWSRMESGIL
ADEMGLGKTVQSIAWISWLFHERQQYGPFLVVVPLSTIPAWQAQFQKWAPDLNVVCYNGS
GKSREVIREYEFGEIKKLKFNVLLTTYEFCLKDRTELGQMRWQALLVDEAHRLKNSESQL
YETLFSFVTNSKLLITGTPLQNNVKELSALMHFLMPERYQITGDFELTDEDREDKIGQLH
DQLKNIMLRRLKRDVIKSLPTKSERILRVELSSLQTHYYRNILTKNFTALKGSEGSGPAM
SMMNIANDLRKASNHPYLFDGAEGSASMKEEILKGLVMNSGKMVLLDKLLARLKADGHRV
LIFSQMVRMLDIISDYLSLRGYMHQRLDGTIPSEQRRKAINHFNADNSPDFAFLLSTRAG
GLGIDLQTANTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSIYRFVSKDTMEEDILERAK
RKMVLEYAIINQVDTSGKNIGQPKSAKQQPDNFSKEELSAILKFGAQNMFKTDDKEQNKK
LAELNLDDLLARAEDLESDKAVGGSSLGGQDFLQQFQVQDIKNDTSWEDIIPAEERDKLD
EEQKEELRKQTEEEMQEQYGKRAASKVQPGTYKTGDAPSPPKKAPQKEAPLIPKKTTAQR
AIELKERDLRNLIRGITRFGDIRIRMDDIVKDSKLEGKNRTVLIQTSDDLLNRCKEAVDE
HNMELKSRAQAGESITQNDRQKAILISFKSIQGVNSLTTYVRYKELSFLHDVLSSVGNHL
SWRIPVDKLKSVVGWACEWTAKDDAMLLVGCWRHGLGNWEIIANDKELGLQGKLFLEEGR
GKTKKEDKKIPNAVHLVRRSDYLLSELKKALEKDFIAKEQMEAAGPPQGVAAQGSRAAQS
KPSHSSPVVKKESVESDEECESMDEDAMKEDMRPVRKQLKSLKNQVDTLKGAEKLQLLKD
CLRSIGTRIDELMTASTNKERTRKHGWHFVTLFWPKEVKYTQLIEIYKKLVGQSSTSASS
TPTQGGTKRQQSQDLSEQETKKPKM
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcatacagatatgaaaatggacatgggagataacagctccagttctggtgat
gcagaaggagaatcagacgcgcctcttaatcaacaaggtgccgtgcctgcgccgatagag
gacgagccactagacgcagccgacaagatcgacttgaattacgttgatccagatttatac
ggtctgcggagatcgggaagatcagcaaaaaatcaatcgatggatccgacatacttggat
gagtttttagacgatgacgaggatgattacgatgaatcacccaagcgcaaatcgaggaaa
ggcggtggaggtagcaagaggagagcggctaatagggaagcgcctccacctcgtttcgac
gaaagctctgaagacgagtacttcacttcagtcacctcaaagaaacgccaaagaactaaa
cagcgcgctcaatcaagcgatgaggatgatagcctggatgatgatgacgaagctggtgct
tttagagcatcctctagaggtaataacggcgtgagaaattacaacgaagaagccatcgcc
ggttttgaaacagatgaaagtgaacgcttcgaagctgatacggttcccgttgaagaacct
aaagttggtgataaaccgtcggaatacgagattgaaactgtattcggtcactcgagggat
gcaactaattcccccgatgaggatgacgatccttacgagaacattagattccacatcaag
tggagaggcttctctcaccatcacaacacagacgagacttatgagttccttaaacgctgc
aaaggtatcaagagagtcgataattacatcaaaaacatctacaattaccagcatgaaatt
tatcgccaccgcgaacagaacaaggaagactttgaaattgttgagatggaaaaagagaga
cttagagatctcgttgatatgtacaggaaggtggagcgcattctcgaccagcgagacagt
ggtacgactacagaatacttttgcaaatggactggtctgcagtactcagagtgtacctgg
gagaagcatgatgatgttgtccaatacgctcctgagcagatcgacgcttatcttctcaga
actgcttcaacaactcttccaaacagatctgccaattacaacagatccagacctgctttt
agaactttaatggagtcccctaactacattcaatctactggtggtgaattactcgattat
cagatgactggtttgaattggctcgcttatctctggtctagaatggaatcaggtattttg
gcagacgagatgggtctcggtaagactgttcaatctatcgcttggatttcttggcttttc
cacgaaagacagcaatatggtcccttcttggtcgtagtccctctatcgaccataccggcc
tggcaagctcaatttcaaaagtgggcaccagacttgaacgtcgtttgctacaatggttct
ggaaagtctcgtgaggttatcagagagtatgagtttggtgaaataaaaaaactcaaattt
aatgtcttgctcactacatacgagttttgcctgaaggaccgtactgagttgggtcaaatg
agatggcaggcactgctcgtcgatgaggctcatcgtctcaaaaattctgagtctcagtta
tatgagacgctcttcagttttgtcacaaattccaagctgctcatcactggtacaccgctt
cagaataacgttaaggaattatccgcactgatgcacttcttgatgcctgaaaggtaccaa
atcacaggtgattttgagttgacagatgaggatcgtgaggataagattggacagctgcac
gatcaattgaagaatattatgttgagaagattaaagagagatgtgatcaagtcacttcca
acaaagtctgaacgtattctacgtgtagagttatccagcttgcaaactcactactaccgt
aatatactcactaaaaactttactgcattgaagggctcagaaggtagtggtcctgctatg
tcgatgatgaacattgccaacgacttgaggaaggcttctaaccacccatacttattcgat
ggcgctgaaggatcagctagcatgaaagaagagatcctcaagggtctcgttatgaactct
ggtaaaatggtactgctcgataagttacttgcacgtcttaaggccgatggtcatcgagtt
cttatcttctcacagatggtccgtatgctcgatatcatctctgactatctatcgttgcgt
gggtatatgcatcaaagattagacggtacaattccatcagagcaacgcagaaaagctatt
aatcactttaatgcggataattctcctgactttgcattccttctgtctacaagagctggt
ggactaggtatcgacttacagacagcaaacacggttatcatttttgacagtgattggaat
ccacaaaatgacttacaagcaatggcaagagctcacagaattggacagaaatcccacgtc
agtatttacagattcgttagcaaagatactatggaggaggatattcttgagcgtgcaaag
agaaaaatggttctagagtatgctattattaatcaagttgatacttctggtaaaaacatc
ggtcaacctaaatcagcaaagcaacaaccagacaatttctcgaaagaagaattgtctgct
atcttgaaattcggtgcacagaacatgttcaagactgatgacaaggagcaaaacaaaaaa
cttgctgaacttaatcttgacgacttgctcgctcgtgctgaagatttggagagtgacaaa
gctgttggtggatcatctcttggtggacaagatttcttgcagcaattccaggtacaagat
ataaagaatgatactagctgggaggatattattccggctgaagagcgtgacaagctcgat
gaggaacagaaggaggagcttcggaaacagactgaagaagagatgcaggagcagtatggt
aaaagagctgcatcaaaggttcaaccaggaacatataagactggggatgcaccatcacct
ccaaagaaggcaccgcaaaaggaagcaccactaataccgaagaagacaacagctcagcgt
gctatcgagttgaaggaaagagatctgcgaaatttgattcgtggtataaccagattcggt
gatattagaattcgcatggatgatatcgtcaaagacagtaaacttgaaggaaagaatagg
acagttcttatccaaacatccgatgacttgctaaacagatgcaaggaagctgttgatgaa
cacaacatggagttgaagagccgtgctcaagctggtgaaagcataactcaaaacgatcgt
cagaaagcaattctaatttctttcaagagcatacaaggcgttaactcactgacaacttac
gtgcggtacaaagagctaagcttccttcatgatgtgttgagtagtgtcggtaatcatttg
agctggcgtataccggtagataagttgaaatcagttgttggatgggcatgcgaatggact
gctaaagatgatgcaatgcttttggttggatgttggcgccatggactgggcaattgggaa
attatcgccaacgataaagaacttgggttacagggcaaactcttcttagaggagggcaga
ggaaagaccaagaaagaagacaaaaagatacctaatgcagtacaccttgttcgcagaagt
gactacctactgagtgagttgaagaaggcactcgaaaaggactttattgcaaaggagcaa
atggaagcagccggtccacctcagggagtagcagcacaaggaagcagagcagctcaatca
aagccatcgcactcgtctccagtggtaaagaaagagagcgtggaaagcgacgaagagtgt
gagtcaatggacgaggatgcgatgaaggaggatatgagaccggtgagaaagcagctcaag
tcactaaaaaatcaagtggatactttgaagggagcagaaaagctacagctgttgaaagac
tgtcttcgctcaattggtacgcgtatagatgagctaatgacagcatcgacgaataaagaa
agaacgcggaaacacggttggcactttgtgacgctgttttggccaaaggaagtcaagtat
acgcaattaatagaaatctacaagaagcttgtaggccaatcaagcacctcagcctcctca
acaccaacacaaggaggaacaaaaaggcagcagtcgcaagacctgagtgaacaagaaaca
aaaaagccaaagatgtaa
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integrated database retrieval system