KEGG   Wallemia ichthyophaga: J056_001160
Entry
J056_001160       CDS       T03457                                 
Name
(RefSeq) Chromodomain helicase hrp3
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
wic  Wallemia ichthyophaga
Brite
KEGG Orthology (KO) [BR:wic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:wic03021]
    J056_001160
   03036 Chromosome and associated proteins [BR:wic03036]
    J056_001160
Transcription machinery [BR:wic03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     J056_001160
Chromosome and associated proteins [BR:wic03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     J056_001160
    SLIK complex
     J056_001160
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C CHD1-like_C HTH_Hrp3 Chromo ResIII HDA2-3 Cdh1_DBD_1 CDH1_2_SANT_HL1
Other DBs
NCBI-GeneID: 20374112
NCBI-ProteinID: XP_009269063
UniProt: R9ADL6
LinkDB
Position
Unknown
AA seq 1405 aa
MADHTDMKMDMGDNSSSSGDAEGESDAPLNQQGAVPAPIEDEPLDAADKIDLNYVDPDLY
GLRRSGRSAKNQSMDPTYLDEFLDDDEDDYDESPKRKSRKGGGGSKRRAANREAPPPRFD
ESSEDEYFTSVTSKKRQRTKQRAQSSDEDDSLDDDDEAGAFRASSRGNNGVRNYNEEAIA
GFETDESERFEADTVPVEEPKVGDKPSEYEIETVFGHSRDATNSPDEDDDPYENIRFHIK
WRGFSHHHNTDETYEFLKRCKGIKRVDNYIKNIYNYQHEIYRHREQNKEDFEIVEMEKER
LRDLVDMYRKVERILDQRDSGTTTEYFCKWTGLQYSECTWEKHDDVVQYAPEQIDAYLLR
TASTTLPNRSANYNRSRPAFRTLMESPNYIQSTGGELLDYQMTGLNWLAYLWSRMESGIL
ADEMGLGKTVQSIAWISWLFHERQQYGPFLVVVPLSTIPAWQAQFQKWAPDLNVVCYNGS
GKSREVIREYEFGEIKKLKFNVLLTTYEFCLKDRTELGQMRWQALLVDEAHRLKNSESQL
YETLFSFVTNSKLLITGTPLQNNVKELSALMHFLMPERYQITGDFELTDEDREDKIGQLH
DQLKNIMLRRLKRDVIKSLPTKSERILRVELSSLQTHYYRNILTKNFTALKGSEGSGPAM
SMMNIANDLRKASNHPYLFDGAEGSASMKEEILKGLVMNSGKMVLLDKLLARLKADGHRV
LIFSQMVRMLDIISDYLSLRGYMHQRLDGTIPSEQRRKAINHFNADNSPDFAFLLSTRAG
GLGIDLQTANTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSIYRFVSKDTMEEDILERAK
RKMVLEYAIINQVDTSGKNIGQPKSAKQQPDNFSKEELSAILKFGAQNMFKTDDKEQNKK
LAELNLDDLLARAEDLESDKAVGGSSLGGQDFLQQFQVQDIKNDTSWEDIIPAEERDKLD
EEQKEELRKQTEEEMQEQYGKRAASKVQPGTYKTGDAPSPPKKAPQKEAPLIPKKTTAQR
AIELKERDLRNLIRGITRFGDIRIRMDDIVKDSKLEGKNRTVLIQTSDDLLNRCKEAVDE
HNMELKSRAQAGESITQNDRQKAILISFKSIQGVNSLTTYVRYKELSFLHDVLSSVGNHL
SWRIPVDKLKSVVGWACEWTAKDDAMLLVGCWRHGLGNWEIIANDKELGLQGKLFLEEGR
GKTKKEDKKIPNAVHLVRRSDYLLSELKKALEKDFIAKEQMEAAGPPQGVAAQGSRAAQS
KPSHSSPVVKKESVESDEECESMDEDAMKEDMRPVRKQLKSLKNQVDTLKGAEKLQLLKD
CLRSIGTRIDELMTASTNKERTRKHGWHFVTLFWPKEVKYTQLIEIYKKLVGQSSTSASS
TPTQGGTKRQQSQDLSEQETKKPKM
NT seq 4218 nt   +upstreamnt  +downstreamnt
atggcagatcatacagatatgaaaatggacatgggagataacagctccagttctggtgat
gcagaaggagaatcagacgcgcctcttaatcaacaaggtgccgtgcctgcgccgatagag
gacgagccactagacgcagccgacaagatcgacttgaattacgttgatccagatttatac
ggtctgcggagatcgggaagatcagcaaaaaatcaatcgatggatccgacatacttggat
gagtttttagacgatgacgaggatgattacgatgaatcacccaagcgcaaatcgaggaaa
ggcggtggaggtagcaagaggagagcggctaatagggaagcgcctccacctcgtttcgac
gaaagctctgaagacgagtacttcacttcagtcacctcaaagaaacgccaaagaactaaa
cagcgcgctcaatcaagcgatgaggatgatagcctggatgatgatgacgaagctggtgct
tttagagcatcctctagaggtaataacggcgtgagaaattacaacgaagaagccatcgcc
ggttttgaaacagatgaaagtgaacgcttcgaagctgatacggttcccgttgaagaacct
aaagttggtgataaaccgtcggaatacgagattgaaactgtattcggtcactcgagggat
gcaactaattcccccgatgaggatgacgatccttacgagaacattagattccacatcaag
tggagaggcttctctcaccatcacaacacagacgagacttatgagttccttaaacgctgc
aaaggtatcaagagagtcgataattacatcaaaaacatctacaattaccagcatgaaatt
tatcgccaccgcgaacagaacaaggaagactttgaaattgttgagatggaaaaagagaga
cttagagatctcgttgatatgtacaggaaggtggagcgcattctcgaccagcgagacagt
ggtacgactacagaatacttttgcaaatggactggtctgcagtactcagagtgtacctgg
gagaagcatgatgatgttgtccaatacgctcctgagcagatcgacgcttatcttctcaga
actgcttcaacaactcttccaaacagatctgccaattacaacagatccagacctgctttt
agaactttaatggagtcccctaactacattcaatctactggtggtgaattactcgattat
cagatgactggtttgaattggctcgcttatctctggtctagaatggaatcaggtattttg
gcagacgagatgggtctcggtaagactgttcaatctatcgcttggatttcttggcttttc
cacgaaagacagcaatatggtcccttcttggtcgtagtccctctatcgaccataccggcc
tggcaagctcaatttcaaaagtgggcaccagacttgaacgtcgtttgctacaatggttct
ggaaagtctcgtgaggttatcagagagtatgagtttggtgaaataaaaaaactcaaattt
aatgtcttgctcactacatacgagttttgcctgaaggaccgtactgagttgggtcaaatg
agatggcaggcactgctcgtcgatgaggctcatcgtctcaaaaattctgagtctcagtta
tatgagacgctcttcagttttgtcacaaattccaagctgctcatcactggtacaccgctt
cagaataacgttaaggaattatccgcactgatgcacttcttgatgcctgaaaggtaccaa
atcacaggtgattttgagttgacagatgaggatcgtgaggataagattggacagctgcac
gatcaattgaagaatattatgttgagaagattaaagagagatgtgatcaagtcacttcca
acaaagtctgaacgtattctacgtgtagagttatccagcttgcaaactcactactaccgt
aatatactcactaaaaactttactgcattgaagggctcagaaggtagtggtcctgctatg
tcgatgatgaacattgccaacgacttgaggaaggcttctaaccacccatacttattcgat
ggcgctgaaggatcagctagcatgaaagaagagatcctcaagggtctcgttatgaactct
ggtaaaatggtactgctcgataagttacttgcacgtcttaaggccgatggtcatcgagtt
cttatcttctcacagatggtccgtatgctcgatatcatctctgactatctatcgttgcgt
gggtatatgcatcaaagattagacggtacaattccatcagagcaacgcagaaaagctatt
aatcactttaatgcggataattctcctgactttgcattccttctgtctacaagagctggt
ggactaggtatcgacttacagacagcaaacacggttatcatttttgacagtgattggaat
ccacaaaatgacttacaagcaatggcaagagctcacagaattggacagaaatcccacgtc
agtatttacagattcgttagcaaagatactatggaggaggatattcttgagcgtgcaaag
agaaaaatggttctagagtatgctattattaatcaagttgatacttctggtaaaaacatc
ggtcaacctaaatcagcaaagcaacaaccagacaatttctcgaaagaagaattgtctgct
atcttgaaattcggtgcacagaacatgttcaagactgatgacaaggagcaaaacaaaaaa
cttgctgaacttaatcttgacgacttgctcgctcgtgctgaagatttggagagtgacaaa
gctgttggtggatcatctcttggtggacaagatttcttgcagcaattccaggtacaagat
ataaagaatgatactagctgggaggatattattccggctgaagagcgtgacaagctcgat
gaggaacagaaggaggagcttcggaaacagactgaagaagagatgcaggagcagtatggt
aaaagagctgcatcaaaggttcaaccaggaacatataagactggggatgcaccatcacct
ccaaagaaggcaccgcaaaaggaagcaccactaataccgaagaagacaacagctcagcgt
gctatcgagttgaaggaaagagatctgcgaaatttgattcgtggtataaccagattcggt
gatattagaattcgcatggatgatatcgtcaaagacagtaaacttgaaggaaagaatagg
acagttcttatccaaacatccgatgacttgctaaacagatgcaaggaagctgttgatgaa
cacaacatggagttgaagagccgtgctcaagctggtgaaagcataactcaaaacgatcgt
cagaaagcaattctaatttctttcaagagcatacaaggcgttaactcactgacaacttac
gtgcggtacaaagagctaagcttccttcatgatgtgttgagtagtgtcggtaatcatttg
agctggcgtataccggtagataagttgaaatcagttgttggatgggcatgcgaatggact
gctaaagatgatgcaatgcttttggttggatgttggcgccatggactgggcaattgggaa
attatcgccaacgataaagaacttgggttacagggcaaactcttcttagaggagggcaga
ggaaagaccaagaaagaagacaaaaagatacctaatgcagtacaccttgttcgcagaagt
gactacctactgagtgagttgaagaaggcactcgaaaaggactttattgcaaaggagcaa
atggaagcagccggtccacctcagggagtagcagcacaaggaagcagagcagctcaatca
aagccatcgcactcgtctccagtggtaaagaaagagagcgtggaaagcgacgaagagtgt
gagtcaatggacgaggatgcgatgaaggaggatatgagaccggtgagaaagcagctcaag
tcactaaaaaatcaagtggatactttgaagggagcagaaaagctacagctgttgaaagac
tgtcttcgctcaattggtacgcgtatagatgagctaatgacagcatcgacgaataaagaa
agaacgcggaaacacggttggcactttgtgacgctgttttggccaaaggaagtcaagtat
acgcaattaatagaaatctacaagaagcttgtaggccaatcaagcacctcagcctcctca
acaccaacacaaggaggaacaaaaaggcagcagtcgcaagacctgagtgaacaagaaaca
aaaaagccaaagatgtaa

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