KEGG   Wallemia ichthyophaga: J056_001240
Entry
J056_001240       CDS       T03457                                 
Name
(RefSeq) Splicing factor U2AF 50 kDa subunit
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
wic  Wallemia ichthyophaga
Pathway
wic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:wic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    J056_001240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:wic03041]
    J056_001240
Spliceosome [BR:wic03041]
 Complex A
  U2 snRNP components
   U2 related factors
    J056_001240
 Complex B
    J056_001240
SSDB
Motif
Pfam: Mito_carr RRM_1 Lactamase_B_2 Lactamase_B RRM_7 Anti-Pycsar_Apyc1
Other DBs
NCBI-GeneID: 20374192
NCBI-ProteinID: XP_009269075
UniProt: R9AIY4
LinkDB
Position
Unknown
AA seq 1134 aa
MSNYAQEKTVSGSAPAPVSAPVSAPAPAPAKRSYPFWLGGVAASMAACLTHPLDLTKVRM
QTMAAKDRQNMLRTMISTVKEQGIRGLYVGLSASVFRQMTYSITRFGAYEKLKAFTAKPG
QQASAANMVLCASGAGALGGIAGNPADIVLVRMTSDATKPAAERKGYRNALHGTFRMTKD
EGVKTLFRGLGPNTVRAILMNASQLASYDYFKRSLMTFVEMEEGLPLHFSASFLAGTLAT
TVCSPADVIKSRVMSQSSAGGSITQMFKDRDRDYDRRRYSDRPRRDRDDDRYDRSRRRDD
YDRRARREDRERDFERYDRRDRDRSDRDRYDDRRPRRSDRDRDDRRRIDRDRGDRADRDR
GREDMDRSYGTPKRRSPTPDNIVPLSQRKKQRSYWDIKPPGFEGITALQAKYSGIFAMAG
VQRAVAFPGQSSFSNLPPTLEDFTGSRASRRVFIGDIKPNHNEENLTKLFNDKMSTIDQV
AKIPGDATVNVTVKHDRGYAYVEFRNPEEATLALQFDGTIFQGESIQVKRPDVVLEELQS
KQGNNVSGTVPDSDQKIFVGSLPSFLTDEQVMELLSSFGELRSFNLVKEGTTEVSKGFAF
CEYKDPSLTDIAIQGLNGMEVGDRKLVVQRSSTGPMGKVGAGGTSTIAQILPMASETQAF
RTNVLLLLNMVTAEELRDDLDYQEIREDIQEECSQYGEVVKIKIPRPPRPDDPVFRTPGV
VTASGEDFRFEAVAEELGVGKIYILYKTEEQASKALKALAGRVFGGRTIVGAYGKLQDVE
DAPLPPEMPADDAPLPPDEGIPPPPPPTRLMLPEMLPDSNQSDVRETQFEFMFLGTGTSS
AVPILPCVTDPEQRCKTCLSSAEEDTRGNTSAVVQAKGGDGNIKTILIDCGKTFYRDSLR
QFPKRGLRKIDGLLLTHGHADAMYGLDDLRAWTMRSIQDCIDVYTNLDTFNTVKNVFPYM
VDSSKASGGGDVPAFRWHIITPGEQFDVAGVPVISAEVEHGLASPKSVSGDSSPFICLSF
IFPVGLIYMADVSRIPERAYEIIERTFWDRKPAVLALDCLKTDPHLSHFGLEQSLNATYR
IGAQKTLYIGFGHERTHASWIEYIKQKQAVDMDIGPGFDGQTVQVESDGRVYLK
NT seq 3405 nt   +upstreamnt  +downstreamnt
atgtcaaactacgcacaagaaaagacagtttctggttctgcgcctgcgcctgtatctgcg
cctgtatctgcgcccgcacccgcacctgcaaaacgttcatatccattctggctgggaggt
gtcgctgcgtctatggctgcatgcctcacgcacccgctcgatctcaccaaggtgcgtatg
caaacgatggctgcaaaggataggcagaatatgctgcggacgatgatctccacggtgaaa
gagcaaggtatcagaggtctctatgttggtttgagcgcttcggtgtttaggcagatgacc
tactcgattacccgttttggcgcttatgagaaacttaaagcgtttactgccaaacctggt
caacaggccagcgctgctaatatggtgctctgtgcttcaggtgccggggctttgggcggt
attgcggggaatccagcagatattgttctagttagaatgacttcggatgctactaaacct
gctgctgaaagaaagggatatagaaatgcgctgcatggtaccttcagaatgacaaaggat
gaaggagtcaaaacgctgtttagaggattgggcccgaataccgtcagagctatccttatg
aatgcgtcgcagttggctagctacgattacttcaagagaagtttgatgacttttgttgaa
atggaggaaggccttccgcttcatttctctgcgtcattcttggcaggcacactcgctact
accgtgtgctcaccagcagatgtaatcaagtcgagagttatgagtcaatctagcgcgggt
ggatctatcactcagatgttcaaggacagagatagagattacgaccgcagacgttactct
gatagacctcgccgcgacagagacgacgacagatacgatagatctcgccgtcgcgatgat
tacgatagacgcgcacgccgtgaagaccgcgaaagagactttgagcgctacgatcgcagg
gatagagacaggagcgacagagaccgctacgacgacaggcgtccgaggagatccgacaga
gacagagacgataggaggagaattgatagagaccgtggtgatcgcgctgaccgcgaccgt
ggcagagaagacatggatcgtagttacggcactccaaaaagacgcagcccaactccagac
aatattgtgccactatcacaacgcaaaaaacagagaagctattgggatatcaaaccacct
ggcttcgaaggtattacagctttgcaggctaagtattctggtatcttcgccatggcaggc
gttcaacgcgctgttgctttccctggccaatcttccttctctaatcttcctcctacttta
gaggatttcactggatcaagggcttctagaagagtctttattggcgacatcaaaccaaat
cacaatgaagagaacttgacaaagttgtttaatgataaaatgtcgactattgatcaagtc
gcaaaaattcctggcgatgctaccgttaatgtcacagttaagcacgacagaggttacgct
tacgttgagtttagaaacccagaagaggctactctggctctacaatttgatggcaccatc
ttccaaggtgaatccatccaggttaagcgtccagatgttgtgcttgaggagctacagagc
aaacaaggcaacaacgtcagtggaacggtgccagattctgaccagaaaatctttgtcggt
agcttgccttctttcctcacggacgagcaggtgatggagttgctcagtagttttggtgag
ctacgctctttcaatttggttaaagaaggaacgacggaggtttcaaaaggatttgcattt
tgcgagtacaaggatccctcactcaccgacattgctatacaaggtctgaacgggatggaa
gtaggcgacagaaagcttgtcgttcagcgctcatcaactggtccaatgggtaaagttggc
gcaggtggtacatcaacaattgctcagattcttccaatggcgtcagaaacacaagctttc
cgcacaaacgtcttacttttattgaatatggtgaccgcggaggagctcagagatgatctc
gactaccaagaaatcagagaggatattcaagaggagtgttcacagtatggtgaggtggta
aaaatcaagatacctcgaccacctagaccagatgatccagtattcagaacacccggagtt
gttacagcatctggggaagacttccgatttgaagcagttgcagaggagttaggcgttggg
aagatatatattctgtataaaacagaagagcaggcgagtaaggcgttgaaagcgctagct
ggtagagtattcggtggacgtaccattgttggggcgtatggaaaactccaagacgttgaa
gatgctccacttccacctgaaatgcctgctgatgatgcaccattaccaccagacgaaggt
atcccaccaccaccgccaccaacacgcttgatgctaccagaaatgctgccagatagcaat
cagagcgatgtacgagaaacgcaatttgaattcatgtttctgggtacaggtactagctct
gcggtgcccatattgccatgcgtcacggatcccgaacaacgatgcaagacgtgcttatcg
tccgcggaggaggatacgaggggcaatacatcggcagtcgtgcaggcaaaagggggcgat
ggaaatattaagaccatattgattgattgtggcaagacgttttatagggattcgttgagg
caatttcctaagcgagggctgagaaagattgacggactactgcttacacacggccatgct
gatgctatgtatggattagatgatttgagggcgtggactatgcgttcgatacaggactgc
atagacgtttataccaacctggatacattcaacaccgttaagaatgtgtttccttacatg
gtcgatagctcgaaagccagcggcggtggtgatgttccagcattcagatggcacataata
acaccaggagagcagtttgatgtcgcaggtgtgcctgttatctccgcggaggtggaacat
ggattagcttcacctaagagtgtatcgggagatagctcgccgtttatttgtctcagtttc
atattccccgttggtttgatttatatggcagatgtaagtagaattccagagagagcatac
gaaattatagagcggacattctgggatagaaaacccgcagttctcgcactagattgcctg
aaaacagacccccacttatcacatttcggattggaacagagtttgaatgcaacgtatcgg
atcggtgcacagaaaacactttatattggatttggacatgagcgtacacatgctagttgg
atagagtacataaagcagaagcaagcagttgatatggacattggacctgggtttgatgga
caaacagtacaagttgaaagcgatggacgcgtgtatctcaaataa

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