Wallemia ichthyophaga: J056_001459
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Entry
J056_001459 CDS
T03457
Name
(RefSeq) Transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
wic
Wallemia ichthyophaga
Pathway
wic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J056_001459
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
wic01002
]
J056_001459
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wic03021
]
J056_001459
03036 Chromosome and associated proteins [BR:
wic03036
]
J056_001459
Peptidases and inhibitors [BR:
wic01002
]
Metallo peptidases
Family M1
J056_001459
Transcription machinery [BR:
wic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
J056_001459
Coactivators
SAGA/TFTC/STAGA complex
J056_001459
Chromosome and associated proteins [BR:
wic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
J056_001459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
Peptidase_M1
Nop14
2HCT
Motif
Other DBs
NCBI-GeneID:
20374411
NCBI-ProteinID:
XP_009269362
UniProt:
R9ACQ0
LinkDB
All DBs
Position
Unknown
AA seq
1859 aa
AA seq
DB search
MARVCLEVDFSGVFRGFTELTITPTTDALKTVNIHSRQANIHRVLVTPPHAHAAPAHADF
THFDPQSNIALSERHGKDGKIDVHRHPELKRKVYSALSEGDEGELSIVLPPRCISRGVGD
QVSLLPDEPSAQDKEKRIDETDVEKDNNDKEQAEKDAGHAENGTEQSVHKDEQAEHMDDK
EKDKENHNQEKHDENEKEKQKQSEKEKEKEKEKESKEAANNSQDFAPLTIFVEFSITHPF
EGLQVVKPTETSPYRIPHIYTSPTCPDAARCWVPCIDSLWERCTWELEYITPRFLSAVGE
DGVEGEQDEPVVVVSSGDLVEQVAHPSISSKTIFHFAQSLPTSVQHIAFAAGPFNVLPIP
HTSSTTQSTSLHAFGPPGSAKELAASVAIVPRALHFYSSEHGMYPFSSFKVVFVHDPPVD
VTVYSTVVIMSLDLLHPASAIEQTLDTRHKISHALATQWSGINIMPRSWSDMWLVQGLAS
YIANLFLKKSMGNNEYFFRMKKDMDRLAMNDTGQLPPLSVPNALEPPNDNDAPFLLLKAP
LVLHILDRKLSKSGTAHGLSRVLPKIFLGALSGDVIISTNGFLRTCRKVAGVDLRTFADQ
WIFGSGTPRFMIGANFNRKKMCVEMTVKQESPAYDAHTPDTPEIHFNRPTQVFEGQMTVR
IHEADGTPYEHVLDIKEPNKRFDVPFNTKYKRVRRNTKRYQARQAAAAAAAQGDEEAAEA
IGMIDLGFQLNDWEQESERDRWKVEDWTEDDEAAMSQATYEWIRVDADFEWISMITFEQP
DFMWVSQLQRDRDVVAQLEAVHALKSIPSKLVSTQLTRTVLVTNYFFRIRMEAAMVLHTC
ATPELDYVGMFHLFKIFQSRFCYPPPQEIMDPFGFKCIPLANNFDDLSEYFVRKAVIVSL
TSIRDQTSRSMLNIREFLVDQLKYNDNSTNRYSDSYYLSGIINCLAIALVPTVQHEASVL
QQDEDPDADDHPFGPLIRRAAVEEVERYRTMDRLVPSYQNVISVATLEFNVKLMIAGILP
YNAPLFIPYTREGNYPPLRIVAFDCLMLLGSLRHRPIIQYFSTILGYDESRVVRRSLAQS
MIESLIVLMATGELAAIQKKEPQFIEEDAKLSEAKEKDSSKSELDRQLKGLRKDVGKIAS
LRMGIMAVLLSPQVDYHVRWTLLQLCDVLYKGNAEPLPKVKFKLPAPAPHQPAEPASAMP
MKIKLKAPTSQPAQPVPVSMDPVVPVRMEDETPEPEVPEMNGTANGHVTEPVGGGGLNVS
LRKKKDKAVPQAQRNGMASQDVTACRALHKRLQSHKLAGWFLYPVDPVRDGAPDYFSVIK
TPMDIGTMGAKLDGGHYANRFEYEADFKLIVQNATTYNGPSSPVHKTALELDAVFDKQWQ
RMTNTLNAATGRKPTVQVNDKMTSPPTGPEPAPALEPEPEPEPAAAISSPSKPSPPPAQP
AKPRLSLKLKPPKPVDSNGDKEKQPEANGVVDTAAAPQTAQSDAPEPESTAEKIQTDATP
ADTQPVAAPSMQESQSQPIPEAPVTVSEAPEEPMEKAQSVPAQQSLPEENEPTSTPAPVP
APTSAPVQNGNEDALDDELLALSDNKPVQKMPPPPKASSSTPSKLPDGHLDNRKAKILIR
KLMSMPEAAIFLQPVDPILHGCPTYLDEIKHPMDFSTINRKLDEKKYENGDQFIGDIEQI
FKNCRQFNGPGETSMLTAQTCDPVERALRKEWKILMTPKIPHNEKRSLLSMMKVWYKNEH
AFWFLQPVDPIALGIPNYNEVIPKENMRDLSLIQTKLEKDQYPSVDAFEGDIKLMTHNAI
LYNGADAPVSLSAKALEKMAVSNLNDFRNRYNTMSPQPSHKRASSSISDTRSNKKSRNN
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atggcccgagtctgtctcgaggtcgatttcagcggtgttttcaggggattcaccgaactc
actatcactcccactacagacgctctcaagacggtcaacatccattcgaggcaggcgaat
atccacagagtcctcgtcaccccacctcacgctcacgctgcccccgctcacgctgatttc
acccacttcgaccctcagtcgaatatcgcccttagcgaacgccatggcaaagacggcaag
atcgacgtacaccgccatcccgaactcaagcgtaaagtctattctgccctttctgaaggc
gatgaaggcgagctgagtattgtcctcccgcctcgttgtatctcgcgtggcgtaggcgat
caggtttccctacttcctgatgagccttctgctcaagataaggagaagcggattgacgag
acagacgttgagaaagataataacgataaagagcaagcagagaaagatgcaggccacgca
gagaatggtacagagcaatcagtgcataaagacgagcaagcagagcacatggatgacaaa
gagaaggataaagagaaccacaaccaagaaaagcacgacgagaatgagaaagagaagcaa
aagcaaagcgagaaagaaaaagagaaagaaaaggagaaggaaagcaaggaggctgctaac
aactctcaagacttcgcccctctcaccatcttcgttgagttttctatcactcatccattc
gaaggcctacaagtcgtcaagccaacagaaacttccccttatcgcatccctcacatttac
acctctcctacatgccccgatgctgcccgctgttgggtcccctgtattgacagtctttgg
gagagatgtacgtgggaattggaatatatcactccacgctttttaagtgctgttggcgag
gatggcgttgaaggtgaacaagatgagcctgtcgttgtcgtctcttcaggtgatttagtc
gaacaagtcgctcatccatcgatatcctccaagactatcttccactttgctcaatctcta
cccacttccgtacagcatattgcttttgcagctggtcctttcaacgtcctaccaataccg
catacttctagcaccacccaatccacttccctacacgcttttggtccacctggttctgct
aaagagttggccgcctccgtagctatagttccacgtgctcttcatttctacagctcagag
catggtatgtacccattttcttccttcaaagtcgttttcgtgcatgatcctccggtagac
gtcactgtgtattctactgtcgttatcatgtctctagatcttctgcaccctgcatctgct
atcgaacagacgttggatactcgccataaaatatcacacgctcttgccactcaatggtct
ggtattaatatcatgccaagatcttggtctgatatgtggctagttcaaggcttagctagc
tatattgcaaatctttttttgaagaaatctatgggtaacaatgagtatttctttagaatg
aagaaggatatggatcgtttagcaatgaatgatacgggccaactaccaccacttagcgta
ccaaatgcgcttgaaccaccaaatgataacgacgcaccatttttactcttgaaagcacca
cttgtcttgcacattctcgatagaaagctatctaaatctggtacagctcatggattgtct
agagttctgccaaaaatcttcctgggcgcgctttctggtgacgttattatatcaacaaat
ggattcttgaggacttgcagaaaagttgccggagttgatttaagaacgtttgctgatcaa
tggatttttggatctggtacacctagattcatgattggagccaattttaacagaaagaaa
atgtgcgttgaaatgacagtaaagcaagaatcaccagcatatgacgcacatacacccgat
acacctgaaattcattttaacaggccaacccaagtttttgaaggtcagatgactgttaga
attcacgaagctgatggtacaccatatgagcatgttttggatataaaggaacccaacaag
agattcgatgtgcctttcaacacgaaatataagcgtgttagaaggaacacaaagcgttat
caagctagacaagctgctgctgctgctgctgcccaaggtgatgaagaggctgctgaggct
attggtatgatagatttgggtttccagctcaacgattgggaacaggaatcggagagagac
agatggaaggtagaagattggaccgaggatgatgaagctgctatgtcacaagcaacgtac
gagtggatcagagttgatgcagactttgaatggatctccatgattacttttgagcaacct
gatttcatgtgggtgtcccaactacagcgtgatagagatgttgttgctcagttggaagct
gtccacgcgctcaagtctattccttccaaactggtttccactcaactaaccaggactgtt
ctggtcaccaattacttctttagaattagaatggaagctgctatggtgctgcatacctgt
gcaactcctgaattggattatgttggaatgttccacctctttaagatattccagtcaaga
ttctgctatccacctccgcaagaaattatggatccttttggtttcaagtgtataccgctg
gctaacaactttgacgacctcagcgaatatttcgttcgtaaggctgtcatcgtttcttta
acttctatcagagatcaaacgagtagatctatgctgaacattagagagttcctcgtcgat
cagctcaaatacaatgacaattcgacaaatagatactcagacagctattacctatctggt
atcatcaactgcttggctatcgcactagtgccgacggttcagcatgaggccagcgtactt
caacaggacgaggatccggatgcagatgaccatccatttggtcccctcattcgacgtgct
gctgtcgaagaggttgagaggtatagaaccatggatagactcgtaccatcttatcagaac
gttatatccgtagctacccttgaattcaacgtcaaactaatgattgccggtatactacca
tacaacgcacctttgtttattccttatacaagagagggtaactatcctcctttaaggata
gtcgctttcgattgcttgatgctgctcggttctctccgccatcgaccaattattcaatat
ttctcaacaatacttggatacgatgaatcaagagtagtcagaaggtcgcttgcccaatcg
atgatcgaatcgctgattgttctcatggccactggggaattggctgctattcagaagaag
gaaccgcaattcattgaagaagatgctaagctgagcgaagcgaaagagaaagattctagt
aagagcgaattggatcggcagttgaaggggcttcgaaaggatgtcggaaaaattgctagt
ttgagaatgggtatcatggctgtgttgctatcccctcaagtcgattaccacgttagatgg
acgctgctacagctctgtgatgttctatacaaaggcaatgctgagccgttacctaaagtt
aaattcaagttacctgccccagcacctcatcagccagcagagccagcatctgcaatgccg
atgaagatcaagctcaaggcgccgacgtcacaaccagcgcagcctgtaccagtcagtatg
gatcccgttgtgccggttcgtatggaagatgagacacctgagcctgaagtaccagagatg
aatggtacagcaaacggacacgttactgaacctgttggtggaggtggattgaatgtttcg
cttagaaagaagaaagacaaagctgttcctcaagctcaaaggaatggtatggctagtcaa
gacgtcactgcttgtagagctcttcacaagcgcttacaatcacacaagttggcagggtgg
ttcttatatccagttgacccagtcagagacggtgcgcctgattacttttcggtgattaaa
acgccaatggacattggaaccatgggagctaagttggatggtggacactacgccaacagg
ttcgaatatgaagctgattttaagttgatcgttcaaaatgcaacgacttacaatggtcca
tcgtcaccagtgcacaagaccgcgctggagctagatgcagtcttcgataagcaatggcag
cgaatgacgaacacgctcaatgccgctacaggacgtaagcctactgtgcaagtcaatgat
aagatgacaagtcctccgacggggccagaaccagcaccagcactagaaccagaaccagaa
ccagaaccggctgcggcaatttcttcgccatctaaaccaagtccacctccagcacaacca
gccaagcctaggctttctcttaagctgaaaccgcctaagcctgttgatagtaatggcgat
aaggaaaagcaacctgaagctaatggggtggtggatacagcggcagcaccgcaaactgct
caatcagatgcgcctgaaccagaatcaaccgcagaaaaaatccagactgacgctacacca
gctgacacacagcctgttgcagcaccaagtatgcaagaatctcaatctcaacctattcct
gaagctccggtcacggtatcagaggcaccagaagaacctatggaaaaagcacagtcagtt
ccagctcaacagagtctaccagaagaaaatgaacctacgtctacgcctgcgcctgttcca
gctcctacttctgctccagtgcagaatggcaacgaagacgcactcgatgatgagcttctg
gctctgtcagataacaaaccagtgcaaaaaatgcctccacctcccaaagcatcttcaagc
actccttcaaagctaccggacggtcatcttgataacagaaaagccaagattttgattaga
aaactgatgagcatgcctgaggccgcaatattcttacagccagtcgaccccatattgcat
ggttgtccaacgtatctggatgagatcaagcatccgatggacttctctacaataaacagg
aagttggacgagaaaaagtacgagaatggcgatcaattcatcggagatatagaacaaata
tttaagaattgcagacaattcaatggtcctggtgagacaagtatgttgactgcgcagact
tgcgacccagtggagagagctttgaggaaagagtggaagatactaatgacgccgaagatc
ccgcacaatgaaaagaggagcttgctatcgatgatgaaagtatggtacaagaatgagcat
gctttctggttcttacagccggttgatccaattgcattgggtattccaaattataacgaa
gtaatacctaaagagaacatgagagatctgtctttgatacagacgaaactggaaaaagat
caatatccgtcggtggatgcgtttgagggtgatataaagttaatgacgcacaacgcaata
ctttacaatggagcagatgcgcctgtttcattatcagccaaggcattggagaagatggca
gtgagcaatctgaatgactttaggaatagatacaacacgatgagtcctcagccttcgcat
aagcgagcttcatcgagtatttcagatacacgcagcaacaaaaagagtagaaacaattaa
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integrated database retrieval system
