Wallemia ichthyophaga: J056_001663
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Entry
J056_001663 CDS
T03457
Name
(RefSeq) Squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
wic
Wallemia ichthyophaga
Pathway
wic00100
Steroid biosynthesis
wic00909
Sesquiterpenoid and triterpenoid biosynthesis
wic01100
Metabolic pathways
wic01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
J056_001663
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
J056_001663
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
wic01006
]
J056_001663
Enzymes [BR:
wic01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
J056_001663
Prenyltransferases [BR:
wic01006
]
Terpene biosynthesis
Squalene/phytoene synthase
J056_001663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
20374615
NCBI-ProteinID:
XP_009269566
UniProt:
R9ABI4
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MSDLLKLALTHPLEFRTLCRYKIWYEPKRDITHPEEHDTTGFDRQSMRTCWDFLDATSRS
FAPVIKELDSVLARVICIFYLVLRALDTIEDDMTIPLSIKEPLLRSFHQKIREPGWNFAG
SGPEEKDRNLLVKFHSVIDEFMLLDNDCKSVISDITMKMGNGMADYCAAAENPQHPGVET
IQDFDLYCHFVAGLVGEGLSGLFAATKLEKPFIADQLELSNSMGLFLQKTNILRDYREDV
DLGREFWPMSLVKQHGFNSRAELKEPANQQRALWVISSMVLDALRHAPDVLDYLTLIKNQ
SIFNFAAIPQVHAIATLETCFMNPDLLHKNVKIRKAAAVEILMTVRNPRDVAEQFVAFSR
KMHAKLSPADPNFIKLSIAMSRVEQWAERRFPSLLDFEQGQVHFKKWDKRYITFAEFDKR
VTDRETEEKRAHLIPGRTSFDDDPNEKIPWRFVFLIMGCCLTLFLVVAVFVWFFVLWLSN
IGKRFE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttacttaaactcgctttgacccatccactagaatttagaaccctatgtaga
tacaaaatctggtatgaaccaaagagagatattactcacccagaagagcacgatacaact
ggttttgataggcaatcaatgagaacttgctgggatttcttagatgcaacttcaagatca
ttcgcaccagttattaaagagttagatagcgttttagccagagttatttgcatcttttac
ttggttttaagagctttagatactatagaagatgatatgactataccactctccattaag
gaacctctccttagatccttccaccaaaagatacgcgaacctggttggaatttcgccggt
tccggcccggaagagaaagacagaaatttattagtcaaattccactcagtcattgatgag
ttcatgctactcgataatgactgcaaatccgttatctctgatatcactatgaaaatgggt
aacggcatggctgattattgcgctgccgctgaaaacccacaacaccctggtgttgagact
attcaagatttcgacctttactgtcacttcgttgctggtttagtcggtgaaggtttatct
ggcttatttgctgcaactaaattagaaaaacctttcatcgctgatcaactcgagctatcc
aatagcatgggcttgttcttacaaaaaacaaacattctcagagactaccgcgaagatgtt
gatctcggtagagaattctggccaatgtctttggttaagcaacatggtttcaactcccgc
gctgaattaaaagaacctgcaaatcaacaaagagctctctgggtcatctcttcaatggtt
cttgacgccctaagacacgctccagacgtacttgattacctcactctcatcaagaaccaa
tccatcttcaactttgctgctatacctcaagtacacgcaattgcaaccctcgaaacttgc
ttcatgaaccctgatcttttacataaaaacgttaaaatacgcaaggctgctgctgttgaa
attcttatgaccgttcgtaacccaagagatgttgctgaacaattcgttgctttctcaaga
aaaatgcacgctaaattatccccagctgatccaaactttattaaactctccatagccatg
tctagagttgaacaatgggctgaacgtcgcttcccaagtttacttgattttgaacaaggt
caagttcactttaagaaatgggacaagagatatattacttttgctgaatttgataagcgc
gtcactgatcgtgagactgaggagaagagggcccatctcattccaggaaggacttcattt
gatgatgatcctaacgaaaagataccatggaggttcgtttttctcattatgggctgctgt
ctcacccttttcctcgttgtcgccgtatttgtttggttctttgttctctggctctcaaac
atcggaaaacgcttcgaataa
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