Wallemia ichthyophaga: J056_001891
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Entry
J056_001891 CDS
T03457
Name
(RefSeq) RNA polymerase II transcription factor B subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
wic
Wallemia ichthyophaga
Pathway
wic03022
Basal transcription factors
wic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J056_001891
09124 Replication and repair
03420 Nucleotide excision repair
J056_001891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wic03021
]
J056_001891
03400 DNA repair and recombination proteins [BR:
wic03400
]
J056_001891
Transcription machinery [BR:
wic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
J056_001891
DNA repair and recombination proteins [BR:
wic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
J056_001891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
SHOCT
DUF7341
Motif
Other DBs
NCBI-GeneID:
20374843
NCBI-ProteinID:
XP_009269794
UniProt:
R9AH26
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MEIKVLYKKQEGVLKIIESGFEFKSLNSFHVGFDRLNTLFASKAGSTPVRLKVDLLDPQQ
SLTFTFIHPTNALSEREAAKEQLTQAIAGNRARASSQIDRQVSGSAGTSATTSPHPGLGL
SKVDLEIRKKVLVKDPQLAKLHRDLVIGGVITEDEFWQGRQQLLLLEHLSASQKPGKPST
LVDPRPTSSQAGEFTITITPQLVQDIFQEYPVVRKAFIENVPNPLAESDFWIRYFHSHLF
ARHRASSRVDANDARNDPVFDQYLEEADDGLEPRHAQRRVYDRLLDLGSTQADHDASGNA
LDITMQAGKVKAALPLMRRFNEHSQRLLSATVGDAPSVQGESGAQDNYTQQIRIDDLEHH
QEAQPVRLNMKDREQYYTNMILDGEAGGASALQSDTPHMLDTAQLAHSIREGLEEWDVLV
RADDIHDTTPATREIEDGLRSTAQIAAHDTGAAHVATSNAMKAAISCHTACTEFLRLYWS
SKLSQPRDTGKVDRMVDFIRKTPSKVDAVVKKAQTVHEADVLRQALQPVLNGVKKVLANE
QQV
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaagttttgtacaagaagcaagaaggtgttcttaagataattgagtctggt
tttgaattcaaatccctcaattccttccatgtgggtttcgacaggttgaatacgctcttt
gctagcaaagctggctctacgcctgttagactcaaagttgacctgctcgatccacagcag
tcgctgacgttcacctttatccaccccaccaacgccttgtctgagcgagaggcggccaaa
gaacagttaacccaggctatagcgggcaatagagcgcgtgccagtagccagattgatcgt
caggttagtggttctgccggtacctcagctaccacttcaccccaccctggcctcggtctc
tccaaagttgacttggaaattcgcaagaaagttcttgtaaaggatcctcaattggctaaa
ctacacagagatctcgtcataggtggtgtgataacagaggacgagttctggcagggcaga
cagcaactgctactactcgagcacctctcagcatcccaaaagcccggcaaaccatccacg
ctagttgaccctcgcccgacatcctcccaagccggtgaattcacaataacgataactccc
caactagtccaagacatattccaagaataccccgttgtgcgcaaagcctttatagagaat
gtgcctaatcctctcgccgaatcagatttctggataaggtactttcactcacatctattc
gcgcgtcatcgggcgagctcacgggtggatgcgaatgacgcgcgcaacgaccccgtcttc
gaccagtatttggaggaggcagatgacgggctggagccgcgccacgcacagcgccgcgtc
tatgaccgtctgctcgaccttggcagcacgcaagcggaccacgacgcgagcggcaacgca
ctcgacataaccatgcaagcgggaaaagtaaaggcagcgctgccactcatgcgtcgcttc
aacgagcattcgcagcgtcttctcagcgcgacggtgggcgatgcgccaagtgtacagggt
gagtcgggcgcgcaagacaactacacccagcaaattcgcatcgatgatctcgagcaccac
caggaggctcagccagttcgcctcaatatgaaggaccgcgagcagtactacacaaatatg
atactcgatggagaggcgggcggcgcgtctgctttgcagtctgacacgcctcacatgctg
gacaccgcccaacttgctcatagcatcagagagggcttggaggagtgggatgtgctggtg
cgcgctgatgatattcacgatactacacccgccacgcgcgaaatagaggacggattgcgc
tcgactgctcagatcgccgcgcatgatactggcgctgctcatgtagccacctctaacgct
atgaaagctgccattagctgccatacggcgtgcactgagttcctccggctctactggtcc
agtaagttgtcgcagccgcgtgatacggggaaagtggatcgtatggtggatttcatcagg
aaaacaccgtcgaaagtcgacgcagttgtcaagaaggcgcagactgtgcatgaggctgat
gtactcagacaggctctccagcctgttttgaatggcgttaagaaggtgctggctaatgag
cagcaggtgtga
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integrated database retrieval system
