Wallemia ichthyophaga: J056_002178
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Entry
J056_002178 CDS
T03457
Name
(RefSeq) Chromatin structure-remodeling complex subunit snf21
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
wic
Wallemia ichthyophaga
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wic03021
]
J056_002178
03036 Chromosome and associated proteins [BR:
wic03036
]
J056_002178
Transcription machinery [BR:
wic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
J056_002178
RSC complex
J056_002178
Chromosome and associated proteins [BR:
wic03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
J056_002178
SWI/SNF complex
J056_002178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
ResIII
SnAC
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
20375130
NCBI-ProteinID:
XP_009266317
UniProt:
R9APW1
LinkDB
All DBs
Position
Unknown
AA seq
1470 aa
AA seq
DB search
MPAQQQQQFPPNISQVMNRERVQAMIQRLNILRSQGQNERTSPEYAQLAHFLRMFGQFQQ
ARQQQLQQQQQQQQQQPGGAHKTPQAPQSLTPVQVNALKAQMATFQYASQNLPVPDHVQR
EAFEPAQYPVPPPPEDSLRDRTIGAVSEVNNTIESKDAAQKPHEYESYISPLVYLEAGPE
SSSSSTKNQRIIVPSVMPLGIDPYQLIEERNRFQQRRMYWRIQELEGMSSTTSDEPASVT
GNDVLDQKAPQEVDEKPQPNSLTSLNSSDKMKALIELKALKLVEKQRALRQDVISAQSHA
TLLTTDRTAFRRFKKQSLREARATEQLERKQRSERDRKSRQKHLDYIMSIHNHANNLRQA
NRDAVGKSHKMGRAVLKLHGDVEKEEQKRVERVSKERLAALRNDDEEAYLKLIDTAKDTR
ITHLLSQTDTYLDSLTQSVLAQQNEVGMEDNVNFEVEDGPATEATFGGRRQDDETEDQGK
TSVDYYAVAHRVSEKVTTQPSILIGGQLKEYQLKGLQWMTSLYNNRLNGILADEMGLGKT
IQTISLVTFLIERKRQNGPYLIIVPLSTLTNWAMEFEKWAPAVSVAVYKGPPQQRKATQN
RMRQGFQVLLTTFEYVIKDRPVLSKYNWVFMIMDEGHRLKNTESKLSQTLQTFYKTRYRL
ILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGTNEKMDLNEEESLLVI
KRLHKVLRPFLLRRLKKDVEKDLPDKVEKVVKCRMSPLQITLYEQMKKYGQMASIATTDK
NGAVGGSNKAGIKGLQNTIMQLRKIVNHPFVFDAIESAVNPASISDDKLYRVAGKFELLD
RILPKLKATGHRVLIFFQMTAIMTIMEDYLAWRGLKHLRLDGSTKTEERSSLLNKFNDLD
SDYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHADLQAQDRAHRIGQKKEVRILRLIT
ERSVEEQILARAQYKLEIDGKVIQAGKFDNKSTAEEREDFLRSILEQEAEEEEEAGDMND
DEINELLARGEGEIDVFNRMDRERAENDKLFNQMKGLPIDNVGRLITDGELPEIYRTTFK
WNPIIEADQEALEGGRRARAARACVVYDDGLTEEQWVNALENDGTTIEEASRQKRDMAQQ
QPQIPPPDESPELDAGSKRSRPSTKTSTPAPSLPMGKRKRNTTVGTPNVDIEETEPTNKK
KKAGVDGETKERLKKVLLPFFDVVWTLTDEDGRPRSDLFREVPSKKLYPDYALLIKNPVA
LNTIKRKIDRKSYQNARECLSDFHLMCANANTYNEPGSWVAEDADALQAGMDQAWNEKVY
NTGVPGSEMPAEALEPVQAAQVLGAAAQYAVPIQQQQAAQPPLQAQAQMQAQPQPQPQPQ
HMMGVPLGQNSGQMPNTDMPHATYRAPAGYGGVDAGAFIADPMYYQQQAFNQQQQQQQQQ
QQQQQAVYEQEEQEQMYQTYTADPYAPQTE
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgccagcccagcagcagcagcaattcccaccaaatatctctcaggtaatgaaccgtgag
cgtgtccaagccatgatacaaaggctcaacatcctgcgctcccaaggccagaatgagcgc
acgtcgcccgagtacgcccaattggcccacttcctcagaatgtttggtcaattccagcaa
gcacgccagcagcagcttcaacaacagcagcagcaacagcagcagcagccaggaggtgct
cataaaacacctcaagcacctcaatcactcactcctgtacaagtcaacgccttaaaagcc
caaatggctaccttccaatacgctagtcaaaatcttccagtgccagaccacgtccagaga
gaggcgtttgagccagctcagtatcccgttccacctccaccagaagactcgttgcgcgac
aggacaattggcgctgtttctgaagtaaacaatacaatcgaaagcaaggatgccgctcaa
aaaccgcacgaatacgaatcgtacatcagcccactcgtctatcttgaagcaggtccagag
tcttcttcaagcagcacaaagaaccagcgtatcattgtcccatctgtcatgccactaggt
attgatccataccaactgatcgaagagcgcaaccgtttccaacaaagacgcatgtactgg
cgtatacaagagctggagggaatgtcgtcgacgacgtccgacgaaccagcgagtgtcaca
ggcaacgacgtgcttgaccaaaaagcacctcaggaagtagacgagaagcctcaacctaac
tcgcttaccagtctgaactcctcagataagatgaaggcccttatcgaactgaaggcactc
aagctcgtcgagaagcagcgcgctcttcgccaagacgtcatcagcgctcagtcgcacgct
acactgctgacgactgatcgcactgcgttccgcagattcaagaaacagtcactcagagaa
gcacgagcaactgagcagctcgagaggaagcagcgtagcgagcgcgacagaaagagtcgc
cagaagcatctcgattacataatgtctatccacaatcacgccaacaaccttcgtcaggct
aatcgagacgctgttggtaaatcacataaaatgggcagagcggtactcaagctgcacgga
gatgtagaaaaggaagagcagaaacgcgttgaaagagtctccaaggagcgtcttgctgct
cttcgaaacgatgatgaagaagcttacttgaagttgatcgataccgccaaggacacaaga
attactcatcttctttcgcaaacagatacttacctcgactcgcttacacaaagcgtcctt
gctcaacagaatgaagtcggtatggaggataatgtaaacttcgaggttgaagatggtcct
gctacagaggctacattcggtggtagacgtcaagatgatgagactgaggatcagggtaaa
actagtgtggactactacgccgtcgcacaccgtgtcagcgagaaggttacaactcaacct
tccattcttattggtggtcagttgaaggagtatcaattgaagggtcttcaatggatgact
tcgttgtacaataatcgccttaatggtatacttgctgacgagatgggtcttggtaaaaca
attcaaacaatctcactagttactttcctcatcgaacgcaaaagacaaaacggaccgtac
ttgatcattgtacccctgtctacgctgaccaactgggctatggaatttgagaagtgggca
ccagcagtatctgtggcagtgtacaagggtcctcctcagcagaggaaggcaacacaaaat
cgcatgagacaaggtttccaagtccttttgactacatttgaatatgtcatcaaggatcgt
ccagtactcagtaaatacaactgggttttcatgataatggacgaaggtcaccgtcttaag
aatactgaatcaaaactctcacaaactcttcaaacgttctataagacccgttacagatta
atcttgactggtacaccacttcagaacaacctcccagagctgtgggctttacttaacttt
gtcttgccgaagatcttcaacagtgtcaagtcttttgatgagtggttcaatactccattc
gccaatactggaacaaacgagaaaatggatttgaatgaagaagaaagtttgcttgtcatc
aaacgtctccataaagttttgcgtccgttcctattgcgccgtctgaagaaggatgtcgag
aaagatcttcctgacaaggtggagaaggttgttaagtgtagaatgagtccacttcagatc
accctgtatgaacagatgaagaagtatggtcaaatggcatccattgcaacaacagacaag
aatggcgccgttggtggatccaacaaggctggaattaaaggtctccagaacacgatcatg
caactccgtaagattgttaaccatccattcgtttttgatgccatcgagagtgcagtgaac
ccagcttcaatctcggatgacaagttgtatagagtagcaggtaaatttgagctacttgat
agaatattgccaaagttgaaggcaactggtcacagagttttaattttcttccaaatgaca
gctattatgacaatcatggaagactatcttgcgtggagagggttgaaacacttgcgttta
gatggatcaacaaagacagaagagagatcgagtttgttgaacaaatttaacgatcttgac
tctgattactttgtcttcttgctttctacaagagctggtggtttaggtcttaaccttcaa
tcagcagacacagtcattatcttcgactcagactggaatccacacgctgatcttcaggct
caagaccgtgctcacagaattggacagaagaaggaagttaggatattgagattgatcact
gaacgttctgtcgaagagcagattcttgcacgtgcacagtataagttggaaatagacggc
aaggttatccaagcaggtaaattcgacaacaaatcgacagctgaagagcgtgaggatttc
ctgagatctatcctcgaacaagaagcagaagaggaagaagaagctggtgatatgaatgat
gatgaaatcaacgagctgctcgctagaggagaaggtgaaatagatgtcttcaatagaatg
gacagggagagagcagagaatgacaagctgttcaatcaaatgaagggcttgcctattgat
aatgttggaagattaattacagatggagaattaccggaaatctacagaacgacattcaaa
tggaatcctattattgaggctgatcaggaggctttagaggggggcagaagagcgcgtgct
gcgcgtgcttgtgttgtgtacgacgatggtcttactgaagaacaatgggtgaatgcgctt
gaaaatgatggtaccactatcgaagaagcatctagacagaagcgcgatatggctcaacag
cagcctcaaatacctccacctgacgagtcacctgagttggacgctggtagcaaacgcagc
agaccttcgactaagacttccacaccagccccaagtcttccaatgggcaaacgcaaacgc
aataccactgttggtactccaaatgtcgatattgaagagactgaacctacgaacaaaaag
aagaaggcaggtgttgatggggagaccaaggaacgtctgaagaaggtccttttgcctttc
ttcgacgtggtttggacgttgacggacgaagatggtagaccaaggagtgatcttttccgt
gaagtaccatcgaagaagctgtaccctgactatgcactcctgatcaagaacccagtggca
ctaaacacgattaagcgcaagatcgacaggaagtcataccagaatgcaagggagtgtttg
agtgacttccacttgatgtgtgctaatgctaacacatacaacgaaccgggatcatgggtt
gcagaagatgcagatgcattgcaagcaggaatggatcaggcgtggaatgagaaggtgtac
aatacaggcgtgcctggatcggagatgccagctgaagcattagagcctgtgcaggcagca
caggtattgggtgctgcggcgcagtatgcagtgccaattcaacagcaacaagcagcgcag
ccacctctacaagcacaagctcagatgcaggcacaaccacaacctcaaccacagccacaa
catatgatgggagtacctcttggtcagaattcgggacaaatgcctaacactgatatgccg
catgcaacgtatcgggcaccagctggatatggaggcgttgatgcaggcgcatttatcgca
gatcctatgtattatcaacaacaagcttttaatcagcagcagcagcaacaacagcaacaa
cagcaacaacagcaagcggtatatgagcaagaagaacaagagcaaatgtatcagacatat
acagctgatccgtatgcaccacaaaccgaataa
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integrated database retrieval system
