Wallemia ichthyophaga: J056_002308 Help Entry J056_002308       CDS       T03457                                  Name (RefSeq) 5'-3' exoribonuclease 1   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism wic  Wallemia ichthyophaga Pathway wic03008   Ribosome biogenesis in eukaryotes wic03018   RNA degradation Brite KEGG Orthology (KO) [BR:wic00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     J056_002308   09123 Folding, sorting and degradation    03018 RNA degradation     J056_002308  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:wic03019]     J056_002308    03009 Ribosome biogenesis [BR:wic03009]     J056_002308    03016 Transfer RNA biogenesis [BR:wic03016]     J056_002308    03036 Chromosome and associated proteins [BR:wic03036]     J056_002308 Messenger RNA biogenesis [BR:wic03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      J056_002308   mRNA degradation factors    5'-3' decay     5' exonucleases      J056_002308 Ribosome biogenesis [BR:wic03009]  Eukaryotic type   Pre-60S particles    RNases     J056_002308 Transfer RNA biogenesis [BR:wic03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     J056_002308 Chromosome and associated proteins [BR:wic03036]  Eukaryotic type   Gene silencing    piRNA pathway     J056_002308 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_M XRN_N XRN1_D1 XRN1_D2_D3 SH3_12 Motif Other DBs NCBI-GeneID:  20375260 NCBI-ProteinID:  XP_009266447 UniProt:  R9AQA1 LinkDB All DBs Position Unknown AA seq 1491 aa AA seqDB search MRDLYDADSIHSERYPLTSQLVEDNRIPEFDCLYLDMNGIIHTCAANTGQGSVRKVNETD MVQNIFKYIEFLFSKIRPRKTFFMAVDGVAPRAKMNQQRSRRFRTAQEHAENLTKAERLG ENIDDAFNSNCITPGTTFMAKLSQQLKYFVHKKISEDALWQGIDVILSGHEVPGEGEHKI QEFIRLTKAQPHYNPNMRHCLYGLDADLIMLGLLSHEPHFCLLREEVTFGPQKKKKSEGL EHQKFYLMHLSLFREYLDLEFKEIRHTLPFDYDLERIIDDFILLAILVGNDFLPHLPGFH INDGALELLFSSYKKILKDAGGYINVLGNINFNRLQLVMNHLHDFEKTVFKDEMVDTDMA NGPVSQHTPLVLEEGKTTMTTKQAKLHEMLTQSITSGSLSQKGGFLELPLPLGESEREYL HAISENFSLVLEYDHFAADGVPKAVVRVPVSATKREGLSAAQRIGMALDDNSSDSEIEND LNNPDALEDEMENLQVSGFSANFMKSFTALNPRKVVDDPEEIYEEQENAIDRSFEGRFKG WKEEYYSSKLGFNKTSQPEQVRRLVQRYVEGIQWVIKYYYEGCVSWGWFYDYYYAPKISD IVDMGDIKCEYEKGFPFKPFEQLMGVLPSASKELVPLVYRDLMTEETSPIIKFYPEKFEK DMNGKKQEWEAIIKIPFIDEQLLLGTMRRVEQALTPEERLRNSFGDATIFKYDGTREGQK YESTHEKFTTIVNDKCNECVYTLPALGEGAFRQGLVPHARSGKQALAGFPTLYNLEFESL LHKHGVMVFNQPSRKDSIVIVTVNKYENHTAKDVAGSLLGKRVFINWPFLQEAFVAGISD ENAKYTLEGNIVQEEASLSAKFARDSERLETTYSKSRAVRIGVVDIMVHARPLKGLKRKL SGELVKDYEENEQQYPLQTTVLEVESEDERYLEQAAPPLEEEFSVGTQLFFLGVKYGSPA TVEAADNKSNTMTLRLVLMPNLTERPKFNAIGKASNSENYYISPKVAQLHRIQSLTLSKI TSALTIVGPDGKNINIGLNLKFEAKGEKVAGYTQKNHVGWEYSDKASELVGEYKQNFPEV FMRLDRNKGVNNYDEIWQDQDEAAVRLAEIQKWLKAKKVNTFETVSLFVNQMSTESIAQV EKLSEDLADASKKVEPKKAIVKNVPRHAVLKPNHASTRIINQQFRLCDRVVYVADHGKVN LTSRGTVVGIASNNLIDVVMDEPFMSGTTLGGKCSAYRGATIPSYAVLNLSNEQYVASMD GMAENAQYEKPAPPFKRQIGPRPALGGDRYVKPATSAPQEHFSPGPKSGYNGAHKGRFNQ QQPSSHQKNLADALSLGGGASGPNAVGRQPKFSGRPLPPHQQMQQMQQLQQPQQPTFRPR PPPLNYDRPAFSGSSVSAQPAQPTLPRNRAPPPHMANPAGSNRAPPPHLLSQQQQQHPTS LQFGDHNIPITHASENHGSAGGRGGNRGGNRGRGGFRGRGGYRGRGGYQQD NT seq 4476 nt NT seq  +upstreamnt  +downstreamnt atgcgtgatttatatgacgctgacagcatccacagtgaaagatacccgcttacaagtcaa ctggttgaagataatcgtattcctgagtttgactgcttatacttggatatgaatggtatc atccacacttgcgctgcaaatacaggccaaggatccgtacgcaaggttaatgagactgat atggtacagaatatattcaagtacattgaatttctcttctcgaaaattagacctcgcaag acattcttcatggccgttgacggtgttgctcctcgtgccaagatgaaccagcaacgtagc cgtcgatttagaactgctcaagaacacgctgaaaaccttacaaaagctgaacgtttgggt gaaaacattgatgacgcattcaacagcaactgtatcactccaggaaccactttcatggct aagctctcccagcaactcaaatatttcgttcacaagaaaatctccgaggatgctttatgg cagggcattgacgttatcttatctggccacgaagttcctggtgaaggagagcacaagatc caggaattcattcgtcttactaaggctcagcctcattacaaccctaacatgagacactgt ctttacggtttagacgctgatctcatcatgctcggccttctctcccacgagcctcacttc tgtctgcttagagaggaagttactttcggtccacagaaaaaaaagaagagtgaaggcctt gaacatcagaagttttacttgatgcacctctcgctcttccgtgaatacttggaccttgag tttaaggaaattaggcacacactcccattcgactatgatttggagagaatcatcgatgac tttatcctcctcgctattctcgtcggtaatgatttccttccgcatttgcctggttttcac attaatgacggcgcacttgagctcttgttctcatcttacaagaagatattgaaagacgcc ggtggatacatcaatgtacttggaaacatcaacttcaaccgtttgcaactcgtcatgaac catcttcacgactttgaaaagaccgtgttcaaggatgaaatggttgacactgatatggct aatggtccagttagtcaacacactccgctagtccttgaagagggcaagaccaccatgacc actaagcaggctaaattgcatgaaatgctcactcaaagtatcacctctggatccctctca cagaagggtggcttcttggagttgccactcccacttggcgaatctgaaagggaatacctg catgcaatttctgaaaatttcagcctcgtccttgaatatgatcactttgccgcagacggc gtacccaaagctgtggtcagagtccctgtatcagctaccaaacgcgaaggtctatcagca gcacaaagaatcggcatggcgcttgatgacaactcctctgatagcgaaattgaaaacgac ctcaacaatccagatgctctcgaggatgaaatggagaatctccaagtcagcggtttcagt gccaacttcatgaaatctttcacagctttgaatccacgcaaggttgttgacgatccagaa gaaatctacgaagaacaagaaaatgccattgatagaagcttcgaaggtcgattcaagggt tggaaggaagagtactacagcagcaagctgggtttcaataagacatcgcaacctgaacaa gttagacgactggtacagcgctatgtcgagggtattcaatgggttattaagtactactac gagggctgcgtttcttggggctggttttacgactactactacgcaccaaaaatctcagat atcgttgatatgggagatattaagtgcgaatatgaaaaaggctttccgtttaagccgttt gaacagctcatgggtgttctcccatctgcttctaaagagttggtgcctcttgtatacaga gacttgatgacagaggagacatcaccaattatcaagttctaccctgagaaattcgaaaag gatatgaatggcaagaagcaggaatgggaggctatcatcaagattcccttcatcgatgaa caactcttactcggtactatgagaagagtggagcaagccttgaccccagaagagagactc cgcaactcgtttggtgatgcaacaattttcaagtatgatggcaccagagagggccagaag tacgaatcgacacatgaaaagttcaccaccatagtcaacgataagtgtaatgagtgtgtc tatactcttccagctctcggcgaaggtgctttcagacagggtttggtgccacacgcacgt agtggtaaacaagcacttgctggatttcccaccctctacaatctagagttcgagtcgctg ctccacaagcatggcgttatggtgttcaaccagccatcgagaaaggactctatcgtgatt gtgaccgtcaacaagtatgagaatcacactgctaaggatgtcgctgggtccttgctgggt aagagggtcttcatcaattggcctttcttgcaggaagcgttcgttgccggtattagcgac gagaatgccaaatacactcttgagggaaatatcgtacaagaggaagctagcttatcagca aagtttgctagagacagcgaacgtctggagaccacttactccaagagccgcgctgtacgt atcggtgtggttgatatcatggttcatgcgcgtcctttgaagggtctcaagagaaaactc tcaggcgaactcgtcaaagactacgaagagaatgagcaacagtatccgctacagactacc gtgcttgaagtagagtctgaagatgagcgttatttggagcaagccgcgccaccacttgaa gaggagttctctgtcggtacgcagttgttcttcttaggcgtgaaatacggttcgcccgct acagtcgaagcagccgacaacaagagcaacactatgacactacgtcttgttctcatgcct aatcttactgaaagacctaaatttaacgcgattggcaaagcttcgaacagcgagaattac tacatctcaccaaaagtggcacagctccatcgtattcaatcactcactttgtcaaagatc acttctgcattgactattgtaggacctgatggtaaaaacatcaacattggtcttaatctc aagtttgaagctaagggtgagaaggtggcgggttatacgcaaaagaaccatgttggttgg gagtattccgataaagcctctgaacttgttggagagtataaacaaaatttccccgaagta tttatgcgtcttgatagaaacaagggtgtcaacaactacgacgaaatatggcaagatcaa gatgaagcagctgtgcgtttggcagaaatacaaaagtggctcaaggccaagaaggtcaat acattcgagacagtctctctattcgtcaaccaaatgtcaaccgagtctatagcccaagtc gagaagctttccgaggatttagctgatgcgagtaagaaagtcgagccaaagaaggcgata gtgaagaacgttcctcgccacgctgtcctcaagccaaaccacgcatctacgcgtattatc aaccagcagttcagactttgtgacagagtggtgtatgtcgccgaccacggcaaggtgaac ttgacgtcgagaggcacagtcgttggaatagcatcaaacaatctaatcgatgtggttatg gatgagcccttcatgagtggcacgacgcttggcggtaaatgtagcgcttacaggggtgcg acgataccttcatatgccgtgctcaaccttagtaatgagcagtatgtggctagcatggat ggaatggccgagaatgcgcagtatgaaaagcccgctccaccattcaagagacagattgga ccgcgtccggcattgggtggtgatcgctatgtgaagccagcgacttcagcaccgcaggaa cacttctcaccaggaccgaaatctggctataatggtgctcacaaaggacgtttcaatcaa cagcagccatcttctcatcagaaaaatctcgctgacgcattgagtttgggtggcggtgcc agtggtccgaatgctgttggcagacagcccaagtttagcggtcgtcctctgcctccacat caacagatgcagcaaatgcagcaactacagcaaccacagcagcctacttttagaccgcgt ccaccgccacttaattatgacagacctgctttctctgggtcttctgtgtcagctcaacca gctcaaccaactctaccaagaaacagagcacctccacctcatatggcgaacccagccggt agcaacagagcacctccacctcatcttctcagtcagcagcagcagcagcatccgacatct ttgcagtttggtgatcacaacataccaatcacgcacgcttcagagaaccatggtagtgcc ggtggcagaggtggtaatagaggtggtaatagaggtagaggtggatttagaggcagagga ggctacaggggtagaggaggctaccagcaggactag

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