Wallemia ichthyophaga: J056_002470
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Entry
J056_002470 CDS
T03457
Name
(RefSeq) Ribosomal RNA-processing protein 12
KO
K14794
ribosomal RNA-processing protein 12
Organism
wic
Wallemia ichthyophaga
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
wic03009
]
J056_002470
Ribosome biogenesis [BR:
wic03009
]
Eukaryotic type
90S particles
Other 90S particles
J056_002470
Pre-60S particles
Other pre-60S particles
J056_002470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
20375422
NCBI-ProteinID:
XP_009270010
UniProt:
R9AAP9
LinkDB
All DBs
Position
Unknown
AA seq
1283 aa
AA seq
DB search
MEDALFKIRCHLNSKLPNQRQPALLLVALEETIKEQSPEQSQSPLPISYHSLILSTLDEA
ISSNNTEIISSAIYLEATVIKFIDKKILHNQYQIFESLLQLLSKFTSNTPTLKSLLVVYE
EFFKSLDTQQLQLSSFKSAYNDILKLSIDNRPKVRKLAQFSISNILTDTPNHPHTYLPIT
TSWVIKSFNDLVKRSTHAPSESGIHLCAFVHSLDSIWPIQSLPKLANSLLNTPHLGNSYL
TSSSYHLLSQLLANKSSHTTFDQEKLKTLVDSITSSLPKPDDTLLLSPWLGILDAAISAY
ARLDPNAAALVILNVWPKIFNSHGLASTSTDVRKSAEIACCGIIRWGVSLDMIKNTIDNN
GGVNLSPILDSILASLKGISHRHSIPNVLNVLNALISKLRVRFSYPGPTAAQSLIAPHLT
TIADLRQMPNFEYREKTDDVFGMALEVCGPAYVLELLPLNLSPSLQAKGKEGRAYLLPIM
RSRITNTSLNYFVKELVPLSSQMFEFASQSKNQGKELEAKIYSTLMEQIWNTFPSFCNLP
VDMTVGLNDEFASMLSNVLYSQPQLRSFVLKGLRNLIEKNVSLQKSQGPTEELKKAFNGM
GQEEATVNINYLKTIAPNLLSVLFDLFGTVSRESRGMVGEVIADYLTIASEKDISGTYKK
MSKSLLETLPQHNVKMAKAAKSNKTFNAASDNLVAPHTTMDLLILLSPHLSAKLGANAWE
LATSEQVLMSEDQAVQKKAYRMLNRLCENHSGLFTHDGSRIEKAINTLTNTDNISGGVKR
DRLEVFTLLVRFIPSDKLHYIVSVVPEAVLGVKETNERARSAAFELLLELGSKMARGGKI
ERGVMGEHEHEADGMEAEAATSTETVDADINEYFTILSAGLAGSTPHFISATLTSLARVL
FEFKESIDTALVDNLLGTLHIFVGSTNKEIVKSGIGLVKVAITSLSSELVFAHLATLIPA
LLGWKSENKNHFKANIRHIFERLVKKFGVDVVDAHTPAADKKLISNIRKRTQRAKKGKSD
KDREDEGDMLDQDEDAGKKAKGTDAFEDALYGSESEFEESDDEDGKEKGAKGTGKDKGGR
KGAKKNTNNASDTYIREDDGELVDLLDKSAINNLTSFDPSKQSKRKQPGQEAQKYELDDM
GKLVIKDDDNKEAEEQPDKVAGSAYIHNLESEDGITMGKDGRVRFNKKKRDRSVEGDDDD
DAQTDVKMNDDSDASKKKKKNKQGTVGVGKEFKSKRAGGDVTAKGGQQPYAYVPLNQTKK
LSRGGQGPRLDVTGKKKGRSGKK
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgccttgttcaaaatcaggtgtcacttgaattctaagctgcccaatcagagg
caaccagcgttgctcctcgttgctctcgaggaaactatcaaagaacaatccccagagcaa
tctcaaagcccactgccaatcagctaccacagcttaatcttgagtactctcgatgaagca
atcagctcaaataatactgagatcatctcctctgcaatatacttggaagccaccgttatc
aaattcatcgacaagaagatattgcacaaccaatatcaaatctttgaatccctattgcag
ctactgagcaagttcactagcaacactcccactctcaagtccttacttgttgtctacgag
gagttctttaaatccttagacacccaacaactccaattatcctccttcaaatctgcttat
aatgacatattgaagctatccatcgacaacagaccaaaagttagaaaactggctcaattt
tcaatctcaaacatcctcacagacacccccaatcatccacacacttaccttcctataacc
acctcttgggttatcaagtctttcaacgatttggttaaaagatccacacacgccccttct
gaatctggtattcacttgtgtgcctttgtgcactcactcgattccatctggccaattcaa
tccctccctaaattggctaattccctcttaaacactccacacctcggcaattcatacctc
acttcatcctcctaccaccttctcagtcaattactcgccaacaaatcctctcacaccacc
ttcgatcaagagaagctcaaaactctcgtcgattccatcacttcttctctccctaaacct
gatgacacccttttgctctctccttggctcggtatacttgacgctgcaatctctgcatac
gctagacttgacccaaatgctgccgctcttgttattttgaacgtttggccgaaaattttc
aattctcacggtctagccagtaccagcaccgatgtgcgtaaatctgccgaaattgcatgc
tgtggtatcatcagatggggtgtgagtttggatatgataaagaacactatagacaacaac
ggtggtgtcaacctatctccgatcctcgactctattctcgcaagcttaaagggtatctca
caccgtcactccattccaaacgtcctcaatgttctcaacgcgctcatcagcaaacttaga
gtgcgtttctcatatccaggcccaacagcagcacagtctctcatcgcaccacatctcaca
actatcgccgatctccgccagatgccaaacttcgaatacagggagaagacggacgatgta
tttggtatggcattggaagtgtgtggaccagcctatgtgcttgaactcctccctctcaat
ctcagcccatctctccaagccaagggcaaagaaggccgtgcgtatctgctgccaattatg
cgctcacgcataaccaacacctctctcaactactttgtcaaagaattggtcccactctca
tcgcagatgttcgagttcgcctcgcagtccaaaaaccagggcaaggaactcgaagcaaag
atatacagcactttgatggagcagatctggaacaccttcccctcattctgcaatctgcca
gtagatatgactgttggtttgaatgatgagttcgcaagcatgctcagcaatgtactctac
tcgcagcctcagttgaggtcattcgtgttgaaaggactgcgcaacctcatcgaaaagaat
gtatctttgcaaaagtcacagggaccaacagaggagctcaagaaagcgttcaatggaatg
ggtcaagaggaggcaacagtcaacatcaattacctcaagaccatcgcaccaaatcttctc
tcagtgctatttgaccttttcggcacagtcagcagggaaagcagaggtatggttggtgaa
gttatagccgactacctaaccatagcctctgaaaaggacattagcggcacgtataagaag
atgtccaagtcactccttgagacgctcccacagcacaacgtcaagatggcgaaagcagcg
aaatctaacaagacattcaacgcagcatctgacaatctagtagcaccacacacgacgatg
gatctgctaatcctactctcaccccatctcagtgcaaaattgggtgcaaatgcctgggaa
ctcgctacgtctgagcaggtgctaatgagcgaagaccaggctgttcagaaaaaggcttac
aggatgctcaacagactgtgcgagaaccacagcggactcttcacacatgacggcagcaga
atcgagaaagccatcaacacactcactaacactgacaatatcagcggtggtgtgaagaga
gatcgcttagaggtattcacgctgcttgtgcggttcataccgtcagataaactccactat
atcgtttctgtcgtccccgaagcggtgcttggagtgaaggagactaacgagagagcgcga
tctgctgcattcgagctgttattagaattagggagtaaaatggcacgcggtggcaagata
gagaggggtgtgatgggtgaacatgagcatgaagctgatgggatggaagcagaagcagca
acatcaactgagacagtggatgccgatatcaatgaatatttcaccatcctctcagcaggt
ctagctggttctacgccgcatttcatctctgccacgctcacgtctcttgcgcgcgttctc
ttcgaattcaaagagtcaatcgacacagctctagtggataatctgcttggcacgctgcac
atcttcgtcggtagcaccaacaaagaaatcgtcaagtcaggtatcgggctggtcaaggtg
gctataacgtcgctctcctcggaattagttttcgcgcatctcgccactctcatacccgcg
ctgcttggatggaagagcgagaacaagaatcacttcaaggcgaatatccgccatatattc
gagcgtctagtgaagaagttcggagtcgatgttgtcgatgcgcatacaccggctgcggac
aagaaactcataagcaatatccgcaagcgcacacagagagcgaagaaggggaagagtgac
aaggatagagaggacgaaggcgacatgctcgaccaggatgaagatgcaggcaagaaagct
aaaggcacggacgcgttcgaagacgctctctacggatctgagtctgagttcgaggagagc
gacgacgaagatggcaaggagaagggcgctaaaggtactggcaaagacaaaggcggtaga
aagggtgcgaagaagaataccaacaacgcttctgatacttacatacgtgaggatgatggc
gaacttgtcgatctgctcgataagagcgctattaataacctcacctcattcgatccatcc
aagcaatcaaagaggaaacaaccaggccaggaagcgcagaaatatgagctcgacgatatg
ggcaagttggtcatcaaggatgatgacaacaaggaagcagaagaacaacctgacaaggtc
gccggttctgcctacatccacaacttggaatcagaagatggtatcacgatgggcaaggat
ggtagagtgagattcaacaagaagaaacgcgacaggagcgtcgaaggtgatgacgatgac
gatgctcaaactgatgtcaagatgaatgacgatagtgatgcttccaagaagaagaaaaag
aacaaacagggcactgtgggtgttggaaaagaattcaaatcaaagcgtgcaggcggcgat
gttactgctaaaggcggccagcaaccttatgcttacgtacctctcaaccagaccaaaaag
ctcagcagaggtggccagggtcctcgtcttgatgtcactggtaagaagaagggtagatct
ggaaaaaagtag
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