Wallemia ichthyophaga: J056_002473
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Entry
J056_002473 CDS
T03457
Name
(RefSeq) putative nucleoporin
KO
K14312
nuclear pore complex protein Nup155
Organism
wic
Wallemia ichthyophaga
Pathway
wic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
J056_002473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wic03019
]
J056_002473
Messenger RNA biogenesis [BR:
wic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
J056_002473
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
20375425
NCBI-ProteinID:
XP_009270013
UniProt:
R9AAJ7
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MSLEAFYKPLDEARSCINEWLTKDAEQIPELDDLINSSASTSYTLPPSPSWNAFVKRKTI
HLPDSLFEQYNRLQCRCFMGLFPDIDRAWITIDNKLYLWDYVDGIDFASYEDLPELIVTV
GLVKPKPGVFVETIKHLLVICTSSTVSLLGLSAAPSPSRELALYSTGISVNTDGVDMVSI
TSTQDGRIFLSGSDSCLYELNYQAEEGWFKSRCSLSNHSASPIANFVPTFLKQSSTDPII
GLAIDDARNCLYTLSSNSVIELYHLGKDGHATQKVASASEIARQAAMLCPGFPQILDQRT
FSIKRIFVISPAESSSVHLMAVTSTGVRLYFTHHRRSYGFYMTPSPSAAPTGLELLHVRP
PPQSTQPNQNTIKNLISSDSIYYGHGLYIAASANSEEFDSLLCTGQDVGTAGLTIPQQQP
VAPTVTTTTTANVRPSLVEGASNLILEGRTWAIGEESSMLANANKLPQSMRKGLQGKEQV
AMSELTVQTAYLPRRFLVLTNMGLSVIAKQRPVDVLRNILESSSTSSRDQEIVSFFNNFG
KDQSCAMALAIAAGNPIALSMGEDLYPAGSNIATEPAPPATLSADITQSARRLFYDFGGR
PVSIDRGYPAAATSMNLDALSTNTEILFSGRHNGLVLYLSRLLRPIWKEKVTKLSPTNFN
LRRQISNISDTLLSNAQRNIADLQVFLKSNQQLFATTAGDSRDRTDQSAWKAEHASLIGI
DHLIKQCIEGISFILLLIDYNLSETLSHCEQNLQEQFLNLTYVDLLTTNHGRDIARNVVN
EVINQQISKQISIDAISEILQQRCGSFCSADDVLLYKAIENVRKAHETRDKAERGTILRE
SLRLFGKAARNLSIEKLKEVITEYRLLEFASGAIDLSLICAREWDAAELGLQFWNEGRSV
YFQPNSKLEVPIEVHNDTRVHAYKRRQSCYECIFETLAEAKDKVEQAVSKHERVEEVEQY
RRNAFRRAIESYDAVFHSCFYDWLVSQGLTDLLLDIQSPYLEQHLMRDPLTLEKCELLWQ
FYVRRSRFYDAARVLASLADSVEFPLSLSRRLEYLSLALSNAKSQRHPASASDIGDVEFM
TNLEEKIEVAQVQVEIYRAVKEHTEVAPDAKQNMQQMLEQRLYNVSELFREFAEPLALLE
VQLLIFHIADFYDPSLIAQTWEVLVEHTHYLNVELQPDERFDAVAGVVYSLARRFYPSKI
SFPLDTVINILEQYSYEHGVKKAGWVPTTLNDAGVPYAAIYEVMDTMLESQIPPWQTQNA
IVFLVADVVVMVEAWLRSHTLNFATGQGALPIRRVDESVSEYLALLSSAPYANISAPIDV
KEIREQLSQLQLYLRSKF
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttagaagcattctacaagccattggatgaagcgcgtagctgtataaatgaatgg
cttaccaaagacgcagaacaaataccagaattggatgatttgattaattcatccgcaagc
acctcttacacactcccaccttccccttcctggaacgcgttcgttaagcgcaaaactatc
cacctcccagatagcctgttcgagcaatacaacagactgcaatgccgttgcttcatgggc
ttgttcccagatatcgacagagcttggatcactatagacaacaagctctacttgtgggat
tacgtcgatggcattgactttgcctcgtacgaagatttaccagaactcatagtcaccgtt
ggtctcgttaagccaaagcctggcgtcttcgtagaaactatcaagcatttactcgtaatt
tgcacttcttctaccgtgtctttgttgggtctctctgccgctccttccccgtccagggag
ctggctctgtactccactgggatatccgtaaacacggatggcgtcgatatggtctcaatt
actagcacccaagacggtagaatcttcctctctggttctgacagttgtctctacgaactc
aactaccaagctgaagaaggctggttcaagagtcgctgcagcttgtcgaatcactctgcc
tcccctattgctaactttgtgcctacgttcctcaagcaatcttctactgatcctatcatt
ggtttggccatcgatgacgcccggaattgcctctacacactctcttcaaactccgttatc
gagctataccaccttggtaaggatggccacgctactcaaaaggtcgcatccgcttctgaa
atcgccagacaggctgccatgctctgtcccggtttccctcagatattagatcagcgcact
ttctccattaagcgcattttcgtcatttcaccagcagagtcctcgtctgttcacttgatg
gctgttacttccaccggcgtcagactctactttacacaccatcgtcgctcatatggcttt
tacatgaccccttcgccctctgccgctccaactggtctcgaattgctccacgtcagacct
cctcctcagtccacccagcctaatcagaacactattaagaatcttatcagctccgattct
atctactacggtcacggtttgtacattgctgcatcagcaaactctgaagaatttgacagc
ttgttatgcacaggccaggacgtcggtactgctggtttgactataccacagcaacaaccg
gtagcaccaacagtgacgacaacaacaaccgcaaatgtcagaccatctcttgtcgaaggt
gcctccaatcttatcttggaaggtaggacatgggcaattggcgaagagagcagcatgtta
gctaatgcaaataaacttccccaatcaatgcgcaaaggattacaaggcaaggagcaagta
gcgatgagtgagctgacggtacaaacagcttatcttccaagacgctttcttgttcttacc
aacatgggattgagtgtaatagcaaaacagcgtccagtcgacgttttgagaaacatcctc
gaatcaagcagcactagtagcagagatcaagaaattgtctccttcttcaacaatttcggt
aaagatcagtcatgtgcaatggcattggcgattgctgctggtaacccaattgctctgtcg
atgggtgaggacctctatccggctggatcaaatatcgcaactgagcctgctcctcctgca
actctctccgccgatatcactcagagtgccagaagactcttttatgactttggcggtagg
cctgtctccattgatagaggatacccagctgcggctacgagtatgaatttagatgctctc
tctacaaatactgaaatattgtttagtggtcgtcacaacggattggttctctacctctca
cgcctcttgcgtccaatatggaaggagaaggtgaccaagttatccccaaccaatttcaac
cttcgtcgccaaattagtaacatctcagatacgcttttgtccaatgcgcagaggaatata
gcagatttacaagttttcttaaaaagcaatcagcaattattcgcaacgacagcaggcgac
tcacgcgatcgcactgatcagtccgcatggaaagctgagcatgcgtctttgattggtatt
gatcatcttataaagcagtgcatcgaaggcatatccttcattctactgcttatcgactat
aacctctcggaaacgctttcacactgtgaacaaaatcttcaagagcagttccttaatctg
acatacgtcgatttgttgacaacaaaccacggccgggatatcgcaagaaatgtcgtaaat
gaagtaattaatcagcaaatttcgaaacaaatctcaatcgacgctatctccgaaattctt
caacaacgttgcggatctttctgttcagcagacgatgtcttgctgtataaagccatcgag
aatgttagaaaagcacacgaaacaagagataaagctgagcgtggtaccattttaagagag
agtttgagattgtttggaaaggcagccagaaatttatccatcgagaagctcaaagaggtt
atcacggagtatagactgttagaatttgcatctggagctatagatttgtcgctcatctgc
gcaagagagtgggacgcagcggagttaggattacaattctggaatgagggcagaagtgtt
tatttccaacctaacagtaaactggaagtccctatcgaggtgcacaatgatactagagta
catgcatacaagcgccgtcagagctgttacgagtgcattttcgaaacacttgccgaggct
aaggacaaggtggagcaggcagtgtcgaaacatgaaagagtggaagaggtcgagcagtac
cgtcgcaatgcgtttagacgtgcgatagaatcatatgacgctgttttccactcttgtttt
tatgattggttggtttctcagggtctgactgatctcctgctagacatacagtcgccatat
ctcgaacaacatctcatgagagacccactcacactcgagaaatgcgagctgctttggcag
ttttacgtgcgcaggtcgcgtttctacgatgcagccagagttttagcatctctggcagat
tctgtcgagttccccttatctttatcgagacgtctcgagtacctctcactcgcactttcg
aatgcaaaatcacaacgtcatcccgcttctgcgtctgatattggtgatgtagagttcatg
accaacctcgaggaaaagattgaggttgcacaagtacaggtggagatctaccgtgcagtg
aaggaacacacggaagttgcgcccgacgccaagcaaaatatgcaacaaatgctcgaacag
cgtttgtataatgtcagtgagcttttcagagagttcgctgaaccactagctttgcttgag
gtgcagctacttattttccacattgctgatttctacgaccctagtctgatagcgcagaca
tgggaagtgttagtggaacacactcactatttaaatgtggagctgcagcctgatgagcga
tttgatgctgttgctggggtagtgtactcactcgcgcgtcgtttctacccatccaagata
tcattcccgttagacaccgtcataaacatcctcgagcagtacagctatgagcatggcgtg
aagaaggctggttgggtacctacgacgctcaacgacgcaggcgtaccatatgcagctatt
tatgaagttatggatacgatgctcgagtctcaaatacctccatggcagacacaaaacgct
atcgtgtttctcgttgctgatgtcgtcgttatggtggaggcttggctgaggtcgcacaca
ctcaacttcgccaccggtcagggcgccctgcccatccgcagagtcgatgaaagcgtctcg
gaatatctcgctctcctttcaagtgctccctatgctaatatctccgcacctatcgatgtc
aaagagatcagagagcaactgagccaacttcagctatacttgcgctccaagttttag
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