Wallemia ichthyophaga: J056_002516
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Entry
J056_002516 CDS
T03457
Name
(RefSeq) Exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
wic
Wallemia ichthyophaga
Pathway
wic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J056_002516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wic03019
]
J056_002516
Messenger RNA biogenesis [BR:
wic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
J056_002516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
20375468
NCBI-ProteinID:
XP_009270056
UniProt:
R9AGK0
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MTTFTDHTHIDAATYRRLRPREYLNRYLDSNVRIDGRSLLDFRSTSINQGSIETADGSAV
VRLGNTTMVAGIKLKTALPDPSREAGYIVPNVDLNPVSNAKFKSGPPSDQAQVLSSRLND
LLLSANIVNHSQLVIEPRKAVWVVYVDVTCINYDGNALDAAMIAIVAALKNTQLPEANYD
YDHEKVVANKQHYAPLSLNKVVVPSSFGWFDGKLLADLTDFEQSLCAAQITVVVNPDGSL
AHLSTQGLSLGHTIEDSVNITNSAISAAQHRYASVSKLII
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgacaacattcaccgaccacacccacatcgatgctgcaacatacagacgcctcagaccg
cgggagtatctaaacaggtatttggactccaatgtgcgcatagatggtagatcattgctc
gacttccgaagcacaagcatcaaccaaggctcaattgaaaccgcagacggcagcgctgtt
gtacgcctcggcaacactacaatggtggccggtataaagctcaaaactgctctgccagat
ccaagtcgcgaggcgggctacatagtccccaatgttgatcttaatcctgtctccaatgct
aaattcaaaagcggtcctccttcggaccaggcgcaggtgctcagcagccgtctcaacgat
cttcttctatcagccaacatcgtaaatcactctcaactcgttatagaaccacgtaaagct
gtttgggtggtctatgtcgatgttacgtgtataaattacgacggaaacgctctcgatgct
gctatgattgctatcgttgcagcgttgaagaatactcagctgcctgaagctaattatgac
tacgatcatgaaaaggtagtagctaataagcagcactacgcccctctttccctcaacaag
gtcgttgtcccctcctcatttggctggttcgatggcaagctactcgctgacctcaccgac
tttgaacagtctttatgcgcagcacagatcactgtcgtcgtcaatccagacggttcacta
gcacatctctccacacaaggactcagtcttggtcacaccatagaggacagtgtcaacatc
accaattctgctatctcagcagcccaacaccgctacgccagcgtatcaaaactaataatt
tag
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