KEGG   Wallemia ichthyophaga: J056_002516
Entry
J056_002516       CDS       T03457                                 
Name
(RefSeq) Exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
wic  Wallemia ichthyophaga
Pathway
wic03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:wic00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    J056_002516
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wic03019]
    J056_002516
Messenger RNA biogenesis [BR:wic03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     J056_002516
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 20375468
NCBI-ProteinID: XP_009270056
UniProt: R9AGK0
LinkDB
Position
Unknown
AA seq 280 aa
MTTFTDHTHIDAATYRRLRPREYLNRYLDSNVRIDGRSLLDFRSTSINQGSIETADGSAV
VRLGNTTMVAGIKLKTALPDPSREAGYIVPNVDLNPVSNAKFKSGPPSDQAQVLSSRLND
LLLSANIVNHSQLVIEPRKAVWVVYVDVTCINYDGNALDAAMIAIVAALKNTQLPEANYD
YDHEKVVANKQHYAPLSLNKVVVPSSFGWFDGKLLADLTDFEQSLCAAQITVVVNPDGSL
AHLSTQGLSLGHTIEDSVNITNSAISAAQHRYASVSKLII
NT seq 843 nt   +upstreamnt  +downstreamnt
atgacaacattcaccgaccacacccacatcgatgctgcaacatacagacgcctcagaccg
cgggagtatctaaacaggtatttggactccaatgtgcgcatagatggtagatcattgctc
gacttccgaagcacaagcatcaaccaaggctcaattgaaaccgcagacggcagcgctgtt
gtacgcctcggcaacactacaatggtggccggtataaagctcaaaactgctctgccagat
ccaagtcgcgaggcgggctacatagtccccaatgttgatcttaatcctgtctccaatgct
aaattcaaaagcggtcctccttcggaccaggcgcaggtgctcagcagccgtctcaacgat
cttcttctatcagccaacatcgtaaatcactctcaactcgttatagaaccacgtaaagct
gtttgggtggtctatgtcgatgttacgtgtataaattacgacggaaacgctctcgatgct
gctatgattgctatcgttgcagcgttgaagaatactcagctgcctgaagctaattatgac
tacgatcatgaaaaggtagtagctaataagcagcactacgcccctctttccctcaacaag
gtcgttgtcccctcctcatttggctggttcgatggcaagctactcgctgacctcaccgac
tttgaacagtctttatgcgcagcacagatcactgtcgtcgtcaatccagacggttcacta
gcacatctctccacacaaggactcagtcttggtcacaccatagaggacagtgtcaacatc
accaattctgctatctcagcagcccaacaccgctacgccagcgtatcaaaactaataatt
tag

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