Wallemia ichthyophaga: J056_002580
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Entry
J056_002580 CDS
T03457
Name
(RefSeq) hypothetical protein
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
wic
Wallemia ichthyophaga
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
wic04121
]
J056_002580
Enzymes [BR:
wic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
J056_002580
Ubiquitin system [BR:
wic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
J056_002580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4
zf-RING_UBOX
Helicase_C
zf-rbx1
Prok-RING_4
zf-RING_16
zf-C3HC4_4
zf-ANAPC11
zf-C3HC4_5
FYVE
TRAF3_RING
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
20375532
NCBI-ProteinID:
XP_009270120
UniProt:
R9AG79
LinkDB
All DBs
Position
Unknown
AA seq
1645 aa
AA seq
DB search
MASTNSTHSLDVGSCKPLLRSLKTQINNFKNGISVPQPVDHPMHTPPSLEGLQIVDHTFT
ITSEPEDDSRPSWFSNSINNLKQSLPKPYNESHTIEFGKVQLQASAQYKGMYFMPPRVRI
PGKFTDVADGFIASLPNKVPNEEKEWLKANGFGYIKSDEDTSILKRVNGWVNAAVAVGTL
SQNQSVANVLPTAKLITCPTSSDNAEDVEFQIIITLKVFLKQKLIQEAPNDSLKLLLMRY
KPPLVPKPTTPIRLSTQFFYSILQPATPIANTVSTSYLKTPLKDFQKSSIEFMQGREDNP
DNIIEPGWIQLTDEWQYSAISAQFRQNNQPPKTSINGSMLCEEMGLGKTVEILGLIAQNK
ERAQEWSNQETESYQRFVKTSLIVTPDHLLQQWVDEAREHTPDLKLLVYNGYKSMDALLT
SARIANTVAKGEPGEPEELEGKPLSASPPPQTQVKQEEDIEPPPTKKKVKKQDDDDFVPQ
FSIQQLELFNSSGSKSQRDFLADGTRVNLTGGTKRKAPQPKYTFDSFGSLKECKQHGLEY
VDNFPQLFSFMNNHDNFDYESKSVLTNRSIVQDFFNQFDLILSTYSTFSKDLVVAHERQP
RARRNGVEYKNDYIPMSPLVSCTFYRVAQDEIQLSGVKKSAEMTALIPRQTSVACSGTPI
TGSIEQLLPILRYLGFQLDGRLIDKKTFAAFATHGLSHDFTRLIQSICVRTTKDHVKKQL
QIPPLQRYIVPLNMGAAEQAYIDEQYKQALSEIGLNERGDYLDANDPSFDISKLRVWITK
LRQLTTHPQTHSATKDIIGKTFRTVDQVLDRMIESSYSHIVTEQRSALASSVKVARLRLL
LDPPNRDGAKLLLMTVLSEANQVLENAQEQIHQHRVKKPKDVVEDIVEHTGAVIAFKEKS
NDVVETAEEAQSRKDWQSHLSNLLNRHRDMLLVIHQAHLILGDIGHQQQVQEEEDINYTA
ADADRAKLLSHAIEIYNKRVDALSENIKKRIEPKKDDLKINYVSGVELGLDPNIVATAKP
LAEMAKKKTPKKYAEVGENEGIDEEGVDREERIPSILLNLDTVIAKLNELANFIIDKRQK
ILEGILNPIDKVEASTEAYGEDAELQANLEIYLEAFESSIKDRREVLGIVDVSDENEKGL
VGKRRANANAKAREEMMLANAIEVEKDQVIDTEQDVLRRQLKLERQALRITKKDRPFRKL
ISELKTESSRIPKHNVKAFKELQSRLHDVYDKQRDLTRTLNLEKDDFLGTFNSRVLYFKQ
LQILSDSVAPLDVERQEEGDRTILQEIAEADRIEAVASRNVQGGRAKLNYLHHIKNSSED
DASECAICTLPFTNGVITSCGHIFCQSCLNRWFQSRPECPHCRTKLSSSSLHKIKVHKTS
QGKEKSVETESDNSNVQAIGETIQKRVRPQYNIIPSHEMFEIEEQKIFTQGHGVKIDTLC
KHILTLRAQKVKSVVFSSWQSGMQIVERAFQKNDITYTLGSDVRKLEMFKKSDDVDVCLL
NGERQSSGLNLTMASVVIFIDPIANFPLELQAIGRVDRMGQHQSVKVYTYASTDTIDEAI
LDLAALKGQSLYIKSQQNATLSTNDMESLEKAQTKGDFIAKKDDLLSLLLPDVHIPSFTP
VADLASQMSDSAENVDANVDVKIED
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacgaattcaacccacagcctggacgttggtagctgtaaaccactcttacgc
tccctcaaaactcaaataaacaatttcaaaaatgggatctcagttccgcaaccagtggac
catccaatgcacacgccaccttcactcgaaggcttgcagatcgtcgatcacactttcaca
ataacatctgagcctgaagatgattcacggccttcctggttttctaattcaatcaacaac
ctcaagcaatcgctgccaaagccctacaacgaatcgcatacaatcgaatttggaaaggtt
cagctacaggcgtctgctcaatataagggcatgtactttatgccgccacgggtgcgcatc
cctggtaaatttacggatgtcgctgatggcttcattgcgtcattgccgaataaagtacca
aatgaggagaaagaatggttgaaagctaacgggtttggatacattaagagtgatgaagat
acaagcattttgaagagggttaatggctgggttaatgctgctgttgctgttggtacgctg
tctcaaaatcaatctgtggcaaatgttttacccacagccaaactaataacatgtcctacc
tcatcggataatgctgaagatgttgaatttcaaattatcataactctcaaggttttcctg
aagcagaaactcattcaagaagctccaaatgactcgttgaagctgcttttaatgcggtat
aaaccaccgcttgtgcctaagcctaccacaccaatcaggctgtctactcagtttttctat
tctatccttcaaccagcaaccccaattgccaacactgtcagcaccagttatctcaaaacg
cctctcaaagacttccaaaaaagctcaattgagttcatgcaggggcgggaagacaatcca
gacaatattattgagcctggatggatccagttgacagacgagtggcagtactctgcgata
tcagcacaatttaggcaaaacaatcaaccacccaagacctctatcaatggcagtatgttg
tgcgaggagatgggcttaggaaagactgttgagatactcggtctcattgcccaaaataaa
gagcgagctcaagaatggtccaaccaagaaactgaatcataccaacgttttgtgaagact
tcgctgatagtcacaccagatcacttgttgcagcaatgggtagacgaggccagagagcat
actcctgatctcaaattgcttgtatataatggctataaaagcatggatgctctgctcaca
tccgcaagaattgccaatacagtagcgaagggagagccaggagagccagaagagttagag
gggaaacctttatcagcatcaccaccgcctcaaacacaagtgaaacaggaagaagacatt
gagcctcctcccacaaaaaagaaagtgaaaaagcaagatgatgacgattttgtcccgcaa
ttctccatccaacagcttgaactctttaactcgagtggctcaaaatctcagcgtgacttt
cttgcagatggcacgcgcgttaaccttacaggtggtactaagcggaaagccccacagccc
aagtacacgtttgatagttttggaagccttaaagagtgcaaacagcatggtttggagtac
gtggataacttcccacaactctttagtttcatgaataatcacgataactttgactatgaa
agtaaaagcgttctcaccaacaggagtatcgtccaagacttttttaatcagtttgacctc
atcctcagtacatacagcactttttcaaaagatttagtggttgctcatgagcgccaacct
agagcacgtagaaacggtgtagagtacaaaaacgactacatacccatgtcaccgctagtc
tcatgcaccttctatcgtgtcgctcaagatgagattcaattgtctggagttaagaagtcc
gccgaaatgacagcactcattccccgccaaacgtctgtcgcttgttcaggcactccgatt
actggctctattgaacagcttctgcccatacttcgctatcttggatttcagttagatggt
cgacttattgataagaaaaccttcgcggcttttgcgactcatggtttatcgcatgacttc
acgcgactaatacagagcatttgcgtgcgcacaaccaaagatcatgtaaagaagcagttg
caaattcctccactccagcgttacatagttccactgaatatgggagctgctgagcaggca
tacattgatgagcagtacaagcaagcgctcagtgaaattggtttgaatgaacgcggcgac
tatttggatgctaatgatccttcctttgatatcagcaagctaagagtttggataacaaag
ctcaggcaactcaccacacatcctcagacacactcagctacgaaagacattataggaaaa
acatttagaaccgttgatcaagtgctagataggatgattgagagttcatattctcatatc
gttacagaacaaagatccgctttggcatcttccgttaaagttgcaagactgcggctactt
ctcgatccacctaatcgtgatggagcaaagttactacttatgacagtactttctgaagct
aatcaagtccttgagaatgctcaggaacagattcatcaacatagagtgaaaaagccgaag
gacgttgttgaggatattgttgagcacacgggtgctgttattgcttttaaagaaaagtcc
aatgacgtcgttgagacagctgaagaagcacaatcgaggaaggactggcagtcccatctt
tcgaacctcttgaatagacaccgcgacatgctattggttatccatcaagcgcatttaatt
ctcggtgatattggccaccaacagcaagtacaagaggaagaggatatcaattataccgcc
gctgatgctgatagagcaaaattacttagtcatgccattgagatctacaacaaacgcgta
gatgctctatctgaaaatatcaagaaaagaattgagcccaagaaggatgatctgaaaata
aactatgtttctggtgtcgagctgggtctagaccctaatatcgttgctaccgctaagcca
ctggctgagatggccaagaaaaaaacgccaaagaagtatgctgaggttggcgagaacgaa
ggcattgacgaggaaggtgttgatcgtgaagagcgtatcccatcaattcttttaaattta
gatacagtcattgccaaacttaacgagctagccaacttcattattgacaagcgtcaaaag
attctggaaggcatcctcaatccaattgacaaggtggaagccagcactgaagcatatgga
gaggacgccgagctgcaagctaatctagagatttatttggaggcttttgaatcttctatc
aaagaccggagagaggttctggggatagtcgacgtatcagacgaaaacgaaaagggtctg
gttggcaagcgccgcgcgaacgcaaacgccaaagctagagaggagatgatgcttgccaat
gcaatagaagttgagaaagaccaagtcattgacacagagcaggatgttcttcgccgtcaa
ctcaaacttgaacgccaagctctgcgtatcacaaagaaggatcggccattcagaaagctg
atatcagaactaaagacggaatctagtagaatacccaagcataacgttaaggcgttcaag
gagttgcaatcgagactgcatgatgtctacgacaagcaacgtgatttgacacgcactctg
aatctcgagaaagatgacttcttgggtactttcaattctagagttctttacttcaaacag
ttacagattttgagtgattctgttgccccacttgacgttgagaggcaggaagagggtgac
cgtactattcttcaagaaatcgcagaagctgataggatagaggctgtcgcgtcgcgcaat
gttcaaggaggtagagcgaaattgaactatctgcatcatatcaagaattcgtccgaagat
gatgcaagcgagtgtgccatatgtacgctgccatttactaatggtgtgattacttcttgt
ggacacatattctgtcagtcttgtctcaataggtggtttcagtcaagacctgagtgtcca
cattgcagaacaaagttgtcttcatcatctcttcacaaaatcaaggtccacaaaacttca
cagggtaaagagaaaagtgttgagactgaaagtgacaactcaaatgttcaagcaatagga
gagactatccagaagcgagttcgaccacagtataatatcatcccgtcccatgaaatgttt
gaaatagaggaacagaagatcttcacccaaggacatggtgtgaagatcgacaccctctgc
aagcacatcttgacgcttcgagcccaaaaagtaaagtcagttgtcttttcttcgtggcaa
agtggtatgcagatcgtagaacgagcattccagaaaaacgatatcacgtatacacttggg
agcgatgtcagaaagctagaaatgttcaagaagtctgatgatgtggatgtctgtttactg
aatggtgagcgtcaatcgagtggattgaatttaacgatggcttctgtcgttatttttatt
gatccaatcgcaaattttccactagagttgcaagctatcgggagagtcgatagaatgggc
caacaccaatccgtcaaggtatacacttatgcatccacagacactatcgatgaagcaata
ctagatttggctgctttgaaaggccaatcactttatatcaagagtcaacagaatgcgaca
ctctcaaccaacgatatggaaagtctggagaaagcacaaacaaagggtgattttatcgca
aaaaaggacgatttgttgtcattactgttgcccgacgtgcacattccctctttcacgcct
gtagctgatctagcatctcagatgtctgacagcgctgagaacgttgatgcgaatgtcgac
gtcaaaatcgaggattag
DBGET
integrated database retrieval system