Wallemia ichthyophaga: J056_002859
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Entry
J056_002859 CDS
T03457
Name
(RefSeq) putative nucleoporin -like protein
KO
K18725
nucleoporin POM152
Organism
wic
Wallemia ichthyophaga
Pathway
wic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
J056_002859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wic03019
]
J056_002859
Messenger RNA biogenesis [BR:
wic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
J056_002859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
20375811
NCBI-ProteinID:
XP_009270399
UniProt:
R9A9N1
LinkDB
All DBs
Position
Unknown
AA seq
1264 aa
AA seq
DB search
MSTPRTVADAHLPRIPTSIFNAPSQRLLALSALTALQAYKLSISLSLWSTQSSTRLLDSE
IALYRWSLIDLSAILLIWWLRIPRLRFHKSVWVAAAAAFFAFDWFLLGSWKLPVTQLSTL
IIPSSLLNAFTFYKTPQEHSVRLKDVIGNRDSHLRGEHTVRVGGFSTAKLNPTTQSFCVP
IAPTNPIALPILFNNTDPLVLAYSVTPLNHDGSLAEESQVEIQGRELEKSRLGYADDDDD
FFDPNHDLYSPHDELALLPRGPGVSAPPRLQKTQNIRYIPLNPSSLPPPPFIVRLKHVVD
KSSELDARLARTEAVVVECPSAGFASDQPTQPNHGDRCVGDKVGLQLGVRSAGGASVGWI
SRGPEGSDLRKLDNIGSTAYTTSAAHARAVSTTTSIPINVTLDRAGAYSLELASLADFFA
NEPYPSLYESGLQHASSSVHYNSHPRPVVQFAGCTAEQPVRLLEGEKASAELSVSVGGIS
PAEGGVDVSVTYFDNPDLQRSGASTPLSVHIPAGHTHAALRVTRPGYYKMEEVRGEYCIG
ATHLPDVCGVQTTPRPTLNMDIRTIEDCSGEVGIRAQMALTGAAPFTLAYLVEFAGEAKR
VEKRIHASRDELSLTPEREGEYKYTFLALSDANYRDIALGERGEGITATQVVHPLAGASF
AEPSTKRTVWSCESGTIDVQVEFTGSGPWTLEYQTSGTSASSIAAPTAFSEKDIHNRRHT
LAVPIPADIDRLGGQFRVSLAGVEDSRRCRKALAQDYTVVVQRVKPTARLSGATSATVRD
GESAYIPVRVTGDPPWVVGYEHGGQAHTVTTHSRQTDLVVDSEGLYRLTEVRDAHCPGTV
VTGEDSFALDFIPRPSLSLGKQTQTQEQKRKHHHTLPPVCTYDDSAVSLAISGEPPFEVV
YEHTHSGARADERIASVRQNPLVSLDTAVAGTHVYRFAGVGDANYALAGSGSAQVQVEQV
VVERPYAQFAHTPRASYCLGDVLAPREHATHPTHTPLIELHGTAPWVLDLEVVEEGGAHA
RRVSVRDIREPLWALDLSPLRLLAFGAHRISIVGVHDASACVADGGEESSAHRRSTLIDV
AESATVVPRARAEDVCVGDSMDFQLGGSAPWVVRYEWDGVTNTVKSRSALFSRVAEEEGR
FAITEVSHHSQRCPSAVDIRRSVHPLPAASVSEGDTYIEDIREGDQAEIRFSFTGTPPFT
FTYERRENIQRGRSHELGRVLERHTVTDIMEHEHSIYSSLEGTYVVSFIQDSYCRYPKDT
LYRT
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccccgcgcaccgtggctgatgcacatctcccacgcatccccacttccatcttc
aacgccccttctcagcgcctactcgctcttagcgccctcactgccctccaagcatacaaa
ttatccatctctctctccctatggtccacacagagctctacacgccttctagactctgaa
atcgctctctatagatggtcgctgatcgatctctctgctatcttgcttatctggtggttg
cggatccctcgactgagattccacaaatccgtgtgggtcgctgcagcagccgcgttcttt
gcatttgattggttcctcttgggcagttggaagctacccgtaacccagttatccacactc
ataatcccttcttccctgctaaacgcgttcactttctacaaaactccgcaggaacacagc
gttaggctcaaggacgtcatcggtaaccgcgatagccatctcagaggcgagcacacggtt
agagttggtggcttcagcaccgcaaagctcaacccaaccactcagtctttctgtgtaccc
atagctcccaccaatccaatcgccctgcctattctcttcaacaacaccgatcctctcgtt
ctcgcctactctgtcacccccctcaaccacgacggcagcttggccgaggaaagccaagtg
gaaatccaaggcagggagctagagaagagcaggcttgggtacgctgatgatgacgatgat
ttcttcgaccctaaccacgacttgtactccccacacgacgagttggctctcttgccccgt
ggtccaggtgtcagtgcccctccacgcctccagaaaactcaaaatatccgttacattcca
cttaatccctcctcacttcctccaccccctttcatcgtccgccttaagcacgtcgtcgac
aagtcttccgaattagacgcccgtctagcacgcactgaggctgtcgttgtagagtgtccc
tctgctggtttcgctagtgaccaacccacacaacccaaccacggcgaccgctgtgtcggc
gacaaggttggccttcagttgggtgtgcgttccgccggcggtgccagtgttggttggatc
agccgcggcccggagggaagtgatttgcgaaaactggataatatcggctcgacagcgtac
acgacatctgcagcgcatgcacgcgccgtatcaacgacaacctccatccctatcaacgtt
acgctcgacagggccggtgcatacagtcttgagctggcttcactggctgatttcttcgcc
aacgagccatacccatcgctgtacgagtcggggctacagcatgcgtcgtcatctgtgcac
tacaactcgcacccacgccctgttgtacagttcgctggctgtacagctgagcagcccgtg
cggctactggagggcgagaaagcatcggccgagttgagtgtgagtgttggtggtatatcc
ccagcggaagggggcgttgatgttagcgtaacttatttcgataatccggatctacagcgc
agcggtgcgtctactccgctcagtgtgcacattcccgctggacacacacacgctgccttg
cgagtcactcgccctggttactacaagatggaggaggtgcgcggtgagtactgcatcggc
gcaacgcaccttcccgacgtgtgcggcgtgcagaccacacccagaccgacactcaatatg
gatatacgtactatagaagactgtagcggggaagtcggtatacgcgctcagatggccctc
accggtgcagcgccattcacgctagcataccttgtcgagtttgctggcgaagcgaagcgg
gtagagaagcggattcacgcgagcagagatgagctctcattgacaccggagcgtgagggc
gagtacaagtacacgttcctagcgctgtctgatgccaactaccgcgatatcgcactagga
gagcgaggcgagggcataacggcgacgcaggttgtacatccacttgcaggtgcgtccttc
gccgagccatctaccaaacgcaccgtgtggagctgcgaaagcgggacgatagatgtccaa
gtggagttcacagggagcggtccatggacgctagaataccagacgagtggaacgagtgca
tcttccatcgccgcacccactgcattcagcgagaaggatatacacaaccgtcgtcacaca
ctcgctgtgcccatacctgcagacattgatcgccttggggggcaattccgcgtcagcctt
gctggcgtcgaggatagcaggcgttgtcgcaaggcgctagcgcaggattacacagtggtc
gtgcagagggttaagccgaccgcaaggctatcgggcgccaccagtgccacagtacgcgat
ggagagtcagcgtatatacccgtacgcgtgacaggcgatccgccttgggtggtaggatat
gagcatggtgggcaagctcacaccgttaccacccactcgcgccagactgaccttgtcgtc
gacagcgaggggttgtatcggctgacggaggtgcgggatgctcattgccctggtactgtt
gtcaccggtgaggatagttttgcgcttgactttatcccacgcccgtcgctcagtttgggt
aagcaaacgcagacgcaggagcagaagcgcaaacatcatcacacactcccgcccgtgtgc
acttacgatgacagcgctgtctccctcgctatctcgggcgagccgccattcgaggtggtg
tacgagcacacacacagcggtgcaagagcggacgagcgcattgcgagtgtgcgtcaaaac
cctctcgtcagtctcgacacagcggtggctggcacacatgtgtaccggtttgcgggtgtt
ggtgatgcaaattacgcattggctgggagtgggagtgcgcaggtgcaagtagagcaggta
gtggtagagcgaccctatgcgcaattcgcgcatacaccacgcgcgtcgtactgtctgggc
gatgtcttagcgccgcgtgagcacgctacacaccctactcacacccccctcatcgagctg
cacggcacagcaccgtgggtgcttgacctggaggtagtcgaggagggaggagcacatgct
cggcgcgtatctgtgcgcgatatccgcgagccgctgtgggcgttagatctttccccgctg
cgcttgctagctttcggcgcacaccgcatcagtattgtcggcgtacacgacgcgagtgcg
tgtgtggctgatgggggtgaggagagcagtgcacaccgtcgcagcaccctcatcgacgtg
gcggaatcagctactgtcgtgccgcgcgctcgcgccgaggatgtatgtgttggtgacagc
atggatttccaactaggcggtagtgcaccctgggttgtgcggtacgaatgggacggcgta
acgaacacggtaaagagccgctcggcgcttttcagccgcgtcgctgaggaggaaggtcgc
tttgcgatcacggaggtatcccaccactcccagcgttgcccaagcgctgtggatattcgc
cgtagcgttcaccctctccctgcagcctcggttagcgagggagacacttatattgaagat
attcgcgaaggcgatcaagctgaaattcgcttctccttcactggcactccccctttcact
ttcacgtacgagcgtagagaaaacatccagcgtggacgctcgcatgaactgggcagagtg
ctcgagagacatacagtgacggatattatggaacatgagcattcaatttactcgtcgttg
gagggcacttacgtcgtctccttcatccaagacagctactgcagatatccaaaagataca
ctgtatagaacatga
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