KEGG   Wallemia ichthyophaga: J056_002976
Entry
J056_002976       CDS       T03457                                 
Name
(RefSeq) putative DNA-directed RNA polymerases I, II, and III subunit RPABC3
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
wic  Wallemia ichthyophaga
Pathway
wic03020  RNA polymerase
wic03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:wic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    J056_002976
  09124 Replication and repair
   03420 Nucleotide excision repair
    J056_002976
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:wic03021]
    J056_002976
   03400 DNA repair and recombination proteins [BR:wic03400]
    J056_002976
Transcription machinery [BR:wic03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     J056_002976
  RNA polymerase III system
   RNA polymerase III
     J056_002976
  RNA polymerase I system
   RNA polymerase I
     J056_002976
DNA repair and recombination proteins [BR:wic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      J056_002976
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 20375928
NCBI-ProteinID: XP_009266555
UniProt: R9AMR3
LinkDB
Position
Unknown
AA seq 145 aa
MSSSIVFDHLFTCDSIDKDGKKFDRVARIGATSTTPNLNCIIDLPVEVFSLAENEKFTMA
LSTSLSNDSTAQAQGHGWRPGMDNQGLAADYEYVCFGKVYKFDEGKQEIATAYISFGGLL
LAITGHVRYLSDISVGEDLYLLVRR
NT seq 438 nt   +upstreamnt  +downstreamnt
atgtcgagctcaatcgtctttgaccacttattcacctgcgacagtatagacaaagatggc
aagaagttcgatagagtggccagaatcggtgcaacttcgacaacgccaaacttgaattgc
attattgatttgcctgttgaggttttcagtttggcggagaatgagaaattcacaatggct
ttgtctacttcgctgtctaatgatagtactgcacaagcccagggacacggttggaggcct
ggcatggataaccaaggtctggctgccgattacgagtatgtctgtttcggcaaggtttac
aagttcgacgaaggaaagcaggaaatagccactgcttatatctctttcggcggtttatta
ctcgcaatcaccggtcatgtccgctacttgagcgatatcagcgtaggagaggatctttat
ttgcttgttcgcagatga

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