KEGG   Wallemia ichthyophaga: J056_003026
Entry
J056_003026       CDS       T03457                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
wic  Wallemia ichthyophaga
Pathway
wic03030  DNA replication
wic03410  Base excision repair
wic03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:wic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J056_003026
   03410 Base excision repair
    J056_003026
   03420 Nucleotide excision repair
    J056_003026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:wic03032]
    J056_003026
   03400 DNA repair and recombination proteins [BR:wic03400]
    J056_003026
Enzymes [BR:wic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     J056_003026
DNA replication proteins [BR:wic03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    J056_003026
DNA repair and recombination proteins [BR:wic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      J056_003026
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 zf-DPOE AmiA-like DUF7479
Other DBs
NCBI-GeneID: 20375978
NCBI-ProteinID: XP_009266605
UniProt: R9AMW8
LinkDB
Position
Unknown
AA seq 2146 aa
MSSRTKFKKAGTGRKEPSAPKIVDERQLLAAKFDKIKESDHLDARLGFSRFEEGGAREAW
LVNMHPTLIEDDDYIGGKAAVDFYFLEDDGGMFKSTITYEPYFYLSCKPGTEAAVEEWLL
RRFESLIYKIERIYKDDLKAPNHLLSLPKVYLQLKFRNVQDLLTIRREVLPLAQSNAEKR
SAVDAYADVVASADQDITLENSGNDAKSKEDPSQLIVDAREYDVPYYLRVATDLGIRVGM
WYTVSASEGKIKLEKVEHRVKRAEPVVMAYDIETCKAPLKFPDSAVDPIMMISYMVDGQG
YLITNREIVSEDIHDFDYTPKDEYDGPFSIFNEPDEAGVLKRFFEHIRQVQPTVMATYNG
DFFDFPYVDARATANGLSLYAETGFERDNEDEYKSATCSHMDCFRWVKRDSYLPQGSHGL
KAVTVAKLGYNPIELDPELMTPYAIEQPQVLAQYSVSDAVATYYLYMKYIHPFVFSLCNI
IPLNPDDVLRKGSGTLCETLLMVEAYSAGVIMPNRHVDPQGSMYEGHLLSSETYVGGHVE
ALEAGVFRNDIATDFKIVPKAIQQLIDDLDNALQFSIVVEEKKRLEDVENYEQVKNEIKG
VLENLRDNPVRQDPPLIYHLDVAAMYPNIMLSNRLQPDAVVDEGMCAACDYNTPDKQCDR
RLTWAWRGEFFPAKRDEYNMIRHALESESFPGRQIGAPKRRFVELSPTEQSALIQKRLGD
YSRKVYRKTHDTKIINREAIICQRENPFYIDTVRAFRDRRYEYKGFHKQWKGKLDNANEE
GSLSASVEAKNMITLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGITCLTGATIIQM
ARQLVEQIGRPLELDTDGIWCMLPGCFPENFKFTLKGGKTMGFSYPCVMLNHLVHGKFTN
DQYHTLTNKDKGEYEMHSENSIFFELDGPYRAMILPASKEEDKLLKKRYAVFEEDGSLAE
LKGFEVKRRGELQLIKFFQSEIFSKFLLGSTTKECYDAVAKVADQWLDILFGKGSTLSDE
ELVELISENRSMSKTLAEYEGQKSTSISTARRLAEFLGEQMVKDKGLSCRYIISAKPFGA
PVTERAVPVTIFTAEQSIKSHYLRKWLKDNSLTDFDIRSILDWDYYIERFGSVVQKIITI
PAALQKIPNPVPRIAHPDWLYKRIANSDDKFRQHKLTDMFEKQREVNQDMEDLGIGPSVN
GKPKQAAVRKKNRQQLEEEEYERVMSIPVPDADEDYSAFIRVMRKRWKLQRAYKRKHGSK
ASRNQAGVSRQTALGMFQDRSVGFSGSAWDIVQIYPSVRPGEFRLWLSLGGNFQQVRLRI
PREFYLNLKNAPGEGEFAEEYMAERVLTVPERLYVDNESHFKNLTSNINVDSVYEMQVPL
IDRALIRLGSKCALSKASTGGLSKGLDRGFELVELSNAAQNSKTYLQNFNQLRYIYMFHA
YVDRRHIYSVFSPDGECKIFIVDSSSRTRPQLPNLDKVYGQSYESYLSRKSEENDEAFEY
SSEMSFEVTFHGGEQSAVKNMFRYLNTLGGQRQGPTIVVLNSPQSQSYFSQFGDGLNNYP
VIAVPTSRKDLSIDESLMWLPKISKRMIGMYFRMSAWIHERIGLAKHYDVPVGNIERDAP
IQLSDISFARRLIKSDILLWWSHSSKPDLGGREQDVPPQQFADEGGGPEEFSNPGTFSNV
VLEVELRDIAVNSILQSSLVNEMEGAGSAATVFDSTSHTIDEYTKGQAKASVTLGEAVVS
SQVFSILKSMVKSWYLDKAKSADGQSAFGHLLVDHLLRWISSPVSRLFDPGIHRFLRGLM
KKVFLQLLAEIKRLGSGIVYADFGRIFILTSKPTAGSAAAYAQYILSATTSAELFKHITL
TTVNFWDYLVWMDLSNFGGVVNHAPNSSSPPEEFHVDMKWNVPQYLPPALQNYFDIVIAE
YIYAMYSEKRKMGLQYRKPLRAIANEGGEVAVDDYKKQEIDFERNLITRVITRRLLKIVT
EMSRKQSEAATELASGVEDNEEANMFIFPLLPGSQGNMKNPTLEFVKSVCTVLGLSRDVA
IEVTVLKRNLLDILKVREFSEDAQFKPPCESFKVTGVVCKACTFVQDLDLVRDVELLEEE
WPCASCGRSQDKMEVELSLLGVVDKLVAGFAVQDLKCSKCGTISGC
NT seq 6441 nt   +upstreamnt  +downstreamnt
atgagcagccgtacgaaatttaaaaaagcaggcacaggccgcaaagaaccatcggcacca
aagatcgtcgacgaacgtcagctacttgccgctaaattcgataaaatcaaagaaagcgac
catctcgacgccaggctaggattctccagatttgaggagggaggagcgcgggaggcgtgg
ctggtgaatatgcaccccacgctcatcgaagatgacgactacattggtggaaaagcagcc
gttgacttttacttcctcgaggacgatggcggaatgtttaaatctacgataacctacgag
ccttatttctatttatcttgcaagccaggcacagaagctgctgtcgaagaatggctttta
cggcggtttgaatcgcttatctataagattgaacgcatttacaaggacgatcttaaggca
cccaaccacctcctcagcctcccgaaagtttatctacagcttaaattcaggaacgttcaa
gacctcctcaccattcgcagagaagttctcccgcttgctcaatcaaatgccgagaagaga
tctgccgtcgatgcgtacgctgacgtcgtcgcttctgctgaccaagatatcacccttgaa
aactccggaaacgacgctaaaagcaaagaagatccctcgcagttaatcgtagacgcacgc
gagtatgacgtaccatattacttacgcgttgcaactgatttaggtatacgagttggtatg
tggtacaccgtctcagcaagcgagggcaaaataaaactggaaaaagttgaacaccgtgtt
aagcgcgctgaaccagtcgtcatggcgtatgatattgaaacgtgtaaggcgcctcttaag
ttcccagacagcgccgtcgatcccatcatgatgatctcttatatggtagacggccaggga
tacctcatcaccaaccgcgaaattgtctctgaagacatccacgatttcgactacactccc
aaagacgagtacgatggccctttctcaatcttcaacgagcccgatgaggctggtgtcttg
aaacgcttcttcgagcacatcagacaggttcaacccaccgtcatggctacttacaacggt
gatttcttcgattttccttacgtcgatgctcgcgccactgcaaatggtttgagtctctac
gccgagacaggtttcgagagggacaatgaggatgagtataaaagtgcaacttgttcacac
atggattgtttcagatgggtgaagcgggattcctatctcccccagggtagtcacggtctc
aaagctgtcactgttgccaaactcggctacaaccccattgaacttgatccagagctcatg
acaccatacgccattgagcagccgcaagtgctcgctcagtattcggtgtctgacgccgta
gctacttactacctctacatgaaatatatccatcctttcgtcttctccctctgcaacatt
atacctctcaaccccgacgatgtccttcgcaagggttctggcacgctctgtgaaactctg
ctcatggtcgaggcttacagtgctggcgtcataatgcccaacagacacgtcgacccacaa
ggcagtatgtatgaaggacatctgctgtcgtcagagacttatgtcggtggtcacgtcgaa
gcgttggaagctggtgtgttcaggaatgacatagctactgatttcaagattgtccccaag
gctattcagcagctcattgatgacctcgacaacgcactccagttctccattgtcgtcgag
gagaagaagaggttggaggatgtggagaattacgagcaagtcaagaatgagatcaagggg
gttttggagaatcttcgtgataatcccgtcagacaagatccaccgttgatctaccatctt
gacgttgctgccatgtatccgaatatcatgttgtcaaacaggctacagccagatgccgtg
gttgatgagggaatgtgcgcagcatgtgactacaacacccccgataagcagtgtgatagg
cgtttgacatgggcttggcgtggtgaatttttccctgcaaagcgagatgagtacaatatg
attagacacgcactcgaatcggagtctttccctggtcgtcagataggtgcgcccaagaga
cgctttgtcgagctctcgcctactgaacagtccgctctaatacagaagcgtcttggggat
tactcgaggaaggtttatcgcaaaacacacgataccaaaatcatcaaccgtgaagctata
atctgtcagcgcgaaaacccgttctacattgacacagttagggcgtttcgcgatagacgg
tatgagtacaaaggttttcacaagcagtggaaaggtaaattagacaatgcaaatgaagag
ggcagtttgtctgcctcagttgaggctaagaatatgataactctttacgactcccttcaa
ctcgcccacaagtgcattcttaactctttctacggttatgtcatgcgtaaaggtgcgaga
tggtattctatggagatggcaggtataacttgcttgactggtgcgactatcatccagatg
gctcgtcagctcgtcgaacagattggcagaccgcttgaattagatactgacggtatttgg
tgtatgcttccaggctgctttcctgaaaactttaaattcactcttaagggcggcaaaacc
atgggcttctcttacccatgtgttatgcttaatcaccttgtccacggaaaattcaccaac
gaccaataccacactctcaccaacaaggacaaaggggagtatgaaatgcattcggagaat
agtattttcttcgaattggatggaccatatcgtgcgatgatcttacctgcctccaaagaa
gaagataagctgctgaagaagcgatacgcggtgttcgaagaggacggttctttagcagaa
ttaaagggattcgaagtgaagcgcaggggtgaactgcagctcatcaaattcttccaaagc
gaaattttcagtaaatttttgttaggatcgacgacaaaggagtgctacgatgctgtcgcc
aaagttgcggaccaatggctggatattctcttcggtaaaggttccactttatctgatgag
gagctagttgaactgatttccgagaatcgatcaatgagtaaaacacttgccgagtacgag
ggtcagaaatccacctccatatcaacagctcgcagacttgcagagttcttgggtgagcag
atggtcaaagataagggtcttagttgtcgatacattatttctgccaaaccattcggtgct
cctgttactgaaagagctgtaccggttaccatcttcactgctgaacagtctatcaaatct
cactatctgcgtaaatggctgaaggataacagtctgactgactttgatattagaagcatt
ctcgattgggattactatattgagagattcggttcagttgttcaaaaaattatcactatt
ccagcagccctgcagaagatacccaacccagtcccacgcatcgctcacccggattggctc
tacaagagaatagcgaattcggatgacaaattcagacagcacaagctgactgatatgttc
gagaagcagagagaggttaaccaggacatggaggacttgggcatcggtccatctgtcaat
ggcaaaccgaagcaggcagcagtgcgcaagaaaaaccgtcagcagctcgaggaggaagag
tatgagagagtcatgtccatccctgtcccagatgccgatgaggattacagtgcattcatt
agagtaatgcgtaagcgttggaagttgcagagggcatataagaggaagcatggatcgaag
gcttcgaggaatcaagcaggcgtttcgcgtcagactgctcttggtatgttccaagaccgc
tctgttggatttagtgggagtgcttgggatatagtgcaaatctatccctccgttagacct
ggtgaattcaggttgtggttaagccttggcggtaatttccaacaagtccgcttgaggata
ccgagggagttctatctcaacctcaaaaatgcacctggtgaaggtgaatttgcggaagag
tatatggctgagagggtcttgactgtccctgagcgactctacgtcgacaatgagtctcac
ttcaagaatctgacgagtaacataaatgttgacagtgtctacgagatgcaggtaccactt
attgatcgtgcgttgatcaggctgggatcaaagtgcgcactttcgaaagcatcaactggt
ggactaagcaagggtcttgaccgcggtttcgaattagtggagctctccaatgcagctcaa
aattctaaaacctatctgcaaaacttcaaccagctgcggtacatctacatgttccacgct
tacgtagatcgccgccacatatatagtgtcttctctccagatggtgaatgcaagatattt
attgtggattcatccagtaggacgcgtccacagctgccaaatttggacaaggtctatgga
cagagttatgaaagttatctatcccgtaaatctgaggagaacgacgaggcatttgagtat
agttctgaaatgtcttttgaagttactttccacggtggcgaacagtctgctgtcaagaac
atgttcagatatctcaatacccttggtggtcagaggcaaggtcctacaattgttgtccta
aactcgccccaatcgcaatcctacttctctcaatttggtgacggactaaacaattaccct
gtcattgcagtgcccacgtcccgcaaagatttgagtatcgacgagagtctgatgtggctg
ccgaagatatctaagaggatgattggtatgtacttccgtatgtcggcttggattcacgag
aggatcgggctggctaagcattatgacgtccctgttggtaacatagagagggacgcccct
atacagctgtctgacatatcgtttgctaggcgattaattaaaagtgatatcctactttgg
tggtctcattcgtcgaagcctgatctcggtggacgtgaacaggatgtgcctcctcaacaa
tttgcagacgaaggcggtgggcctgaagagttctcaaaccctggcacattttcaaacgtc
gtacttgaagttgagttgcgagatattgccgtcaactctatccttcagtcgtcgcttgta
aatgagatggaaggtgcaggatctgcagctactgtctttgacagtacatcacacaccata
gatgagtatacaaaagggcaggccaaagcttctgtcacgttgggagaggctgtcgtgtca
tcgcaggtcttctccattctcaagtcgatggtcaaaagctggtatctagataaggcaaag
tcagctgacggacagagtgcatttggacatttattggttgatcatttgctcaggtggatc
tcttcaccagtgtcacgactcttcgatccaggtattcatcgcttcctgcgaggactaatg
aagaaagtattcttgcagcttttagcggaaatcaagagacttggttcaggtatagtttat
gcggactttggacgaattttcatcctcacatcgaaaccaactgctggctcagctgccgcg
tacgcacagtacattctctcggctacaacctcggctgaattgttcaagcacattacactt
acgacggtaaacttctgggactatctggtgtggatggatctgtccaatttcggtggtgtc
gtcaatcacgctccaaattcatcctctccgcctgaggagttccatgtcgatatgaagtgg
aacgtcccacagtatctcccaccagctttgcaaaactactttgatatagtcatagctgag
tatatctacgccatgtattctgagaaacgcaagatgggtctacaatacagaaaaccactg
cgagcgatcgctaacgaaggaggcgaggttgcggttgatgattacaaaaagcaagaaata
gactttgagaggaatttgatcacgcgtgtgatcactaggagactactcaagatagtcacc
gagatgtctcgcaaacagtcggaagcggcgacggagttggcgagcggtgtggaagacaac
gaagaggccaacatgtttatcttccctctccttccaggctcacagggtaatatgaagaac
ccaacgttggaatttgttaagagtgtgtgcactgtgttagggttgtctagagatgttgct
attgaggtgacagtactgaaacgcaacctgctggatatattgaaagtacgagaattctcc
gaggatgcccaattcaagccgccttgtgaaagctttaaggtgacaggtgtggtgtgcaaa
gcatgtacatttgttcaggatctcgacctcgtgcgtgatgtagagcttcttgaagaagaa
tggccatgtgcttcctgcggtcgctcacaggacaagatggaggtggagctgtcactgtta
ggtgttgtagacaagctggttgctgggttcgccgtgcaagatctcaaatgctccaagtgt
ggcacgattagtgggtgctga

DBGET integrated database retrieval system