Wallemia ichthyophaga: J056_003118
Help
Entry
J056_003118 CDS
T03457
Name
(RefSeq) DNA mismatch repair protein pms1
KO
K10858
DNA mismatch repair protein PMS2
Organism
wic
Wallemia ichthyophaga
Pathway
wic03430
Mismatch repair
wic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
J056_003118
03460 Fanconi anemia pathway
J056_003118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wic03400
]
J056_003118
DNA repair and recombination proteins [BR:
wic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
J056_003118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
20376070
NCBI-ProteinID:
XP_009266697
UniProt:
R9AU85
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MSLNSIDTKTKNKLQSDQVILDLQSAVKELIENSLDANSSIIEINFYNSGFDGFKVIDNG
FGIHESSFSSLTKKHFTSKLSNFDDLNNLCTFGFRGEALSSLSTISKSFDCLTATDVTSP
KATNISFDNKGNITQLRHNIPRQRGTTISLSTLFYNLPVRRREFEKNLKREFSKAINLLQ
SYALCPLHSSVKFNISNYNKANKKSIIFQTAGKSSLPSSIASVFGSTANQSLVPLSLELP
VQVDPSIAKREGITNTSFTVNLIGSISKPLFAHGRSTSDRQYFYINGRPCNLPKVAKTIN
SLFRSYINQSYPFIVADFKIPTDAYDVNITPDKRTIFLHFESSLIDSLNYHLNLFFEPFR
GHFTINKQSQSVPTPIIHQPSIQMHSIPLNEPPNKLSDLPQKDADDDQHSYDRDAESLSE
EQISQDDFQKKPNNNSIDSDNDGSVVCEKVNDLPENPMSSSQINTRHASWASEVFPDNQV
TVDRAPKRRKTETELIDEISDRETDTKIRIDQTDSKVFDNGFYNQIDENDVQNPHNIDMQ
IVNDTFTIDESSEDDEPNYFRQSLTVNIDELHYKWQKDTNKSNALTNENSQKLYSEKLEK
AGIENFDNSQAAEQALSRVLHKTDFENLEILGQFNLGFMIVKRKAVNDNGLQENDLFIVD
QHAADEKYNYEKLQLNSRIQSQKLIKPRTLDLSASDELTVFDNLETLKQNGFEIQVDGDG
ASGRRCQLVALPLSKTTVFDLRVDLEELIHDINENPSQVPRCTKAKDMFASRACRMSVMV
GKSLKKKQMTSIVRNLSTLKQPWVSIFKLLSLIKLLICVELSSWEANAAAPTKLREQAG
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtccctaaattcaatcgatacaaaaacaaaaaataaattgcaatctgatcaagttatt
ttagatctacaatctgccgtcaaagaattaattgagaacagtttagacgctaattcaagc
ataattgaaattaatttctataattctggtttcgatgggtttaaggttattgataatggc
tttggtatccacgaatcatccttctcatccttaactaagaagcactttacttcaaaatta
tccaatttcgacgacctcaacaatttatgcactttcggtttccgtggtgaagccttatcc
agcttatctaccatctctaagtccttcgattgcttaactgcaaccgatgtgacgtcacca
aaagctacaaacatctccttcgataacaaaggaaacattactcagttaagacacaatatc
ccaagacaaaggggtaccaccatctctttgtctactttattctacaatttacccgttcga
agaagggagttcgaaaagaaccttaagagagaattcagcaaagctatcaacttgttacaa
tcttatgcgttatgccctttacactcaagtgtcaaattcaatatttccaactataataaa
gctaataagaagtctatcatctttcaaactgcaggtaaatcttctttaccttcttcaatc
gcttctgtattcggctcaacagcaaatcaatctttagttccgctctctttagaattacct
gttcaagtcgatccttctatagcaaaacgtgagggcataactaacacttcgttcactgta
aacctgattggttcaatatctaaacccttattcgctcatggaagatctacttctgacaga
caatacttttatatcaatggtagaccttgtaatctaccaaaagtcgccaaaacaattaat
tccctattcagatcttacattaatcaatcttatccttttatcgtcgctgattttaagata
cccactgatgcttacgacgtcaatattactcctgacaagcgtacaattttcttacacttt
gaatctagcttaatagattcactcaactaccatttgaacctattttttgaaccatttaga
ggtcactttacgataaacaaacagtctcaatcagttccaacgccaattattcatcaacct
agcattcaaatgcactcaatccctttaaatgaacccccaaataagctttctgatttacct
caaaaggatgctgatgatgatcaacacagctacgatagggatgctgagtcattgtcagag
gaacaaattagtcaagatgattttcaaaaaaagcccaataacaactcaattgatagcgac
aatgatggttcggttgtgtgcgagaaggttaacgatttacccgaaaatccaatgagtagc
tctcaaataaatacgagacatgcttcatgggcatcagaggtgtttcctgataatcaagta
acagttgatcgagcacctaaaagaaggaaaactgagacagaactaattgatgagattagc
gatagagagactgacacgaaaattcgaatcgatcaaactgattcaaaagtttttgacaat
ggcttttacaatcaaatagatgaaaatgatgtccagaatcctcataacattgacatgcaa
atcgtgaatgacacttttacgatcgacgaaagctcagaagatgatgagccaaactacttt
agacagtcactgactgttaatattgacgaacttcattataaatggcaaaaagatacaaac
aaatcgaacgcattgactaatgaaaattcgcaaaagttgtactcagaaaaactggaaaaa
gctggaatagagaactttgataactctcaagctgcagagcaagcgctatcgcgagtattg
cacaagactgactttgagaatctagaaatacttgggcagttcaacttagggtttatgata
gtcaaacgcaaggctgtcaacgacaatggtctacaagagaatgatctctttatcgttgac
caacatgccgcagatgagaagtataattacgagaagctacaactcaattctaggatacag
tctcagaagcttatcaagccacgtactctcgatttaagtgcgtctgatgaattgacagtt
tttgacaacctggagacgctcaaacagaacggcttcgaaattcaagttgacggagatggc
gcgagtggtagacgatgccaattggtagctctgcccctgtcaaaaactacagtgttcgat
ttgagggtagatttagaagagctgattcatgacatcaatgaaaatccaagccaggttccc
cgatgtacaaaagcaaaagacatgtttgctagtcgagcatgcagaatgagtgtaatggtt
ggaaaatccctgaagaagaagcaaatgacaagcatcgttaggaatctttcaacactcaaa
cagccctgggtgagtatcttcaaactactatcattgattaaactcctaatctgtgtagaa
ctgtcctcatgggaggccaacgctgcggcacctactaagcttagagaacaagcaggatga
DBGET
integrated database retrieval system