KEGG   Wallemia ichthyophaga: J056_003118
Entry
J056_003118       CDS       T03457                                 
Name
(RefSeq) DNA mismatch repair protein pms1
  KO
K10858  DNA mismatch repair protein PMS2
Organism
wic  Wallemia ichthyophaga
Pathway
wic03430  Mismatch repair
wic03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:wic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    J056_003118
   03460 Fanconi anemia pathway
    J056_003118
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:wic03400]
    J056_003118
DNA repair and recombination proteins [BR:wic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     J056_003118
SSDB
Motif
Pfam: MutL_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 20376070
NCBI-ProteinID: XP_009266697
UniProt: R9AU85
LinkDB
Position
Unknown
AA seq 839 aa
MSLNSIDTKTKNKLQSDQVILDLQSAVKELIENSLDANSSIIEINFYNSGFDGFKVIDNG
FGIHESSFSSLTKKHFTSKLSNFDDLNNLCTFGFRGEALSSLSTISKSFDCLTATDVTSP
KATNISFDNKGNITQLRHNIPRQRGTTISLSTLFYNLPVRRREFEKNLKREFSKAINLLQ
SYALCPLHSSVKFNISNYNKANKKSIIFQTAGKSSLPSSIASVFGSTANQSLVPLSLELP
VQVDPSIAKREGITNTSFTVNLIGSISKPLFAHGRSTSDRQYFYINGRPCNLPKVAKTIN
SLFRSYINQSYPFIVADFKIPTDAYDVNITPDKRTIFLHFESSLIDSLNYHLNLFFEPFR
GHFTINKQSQSVPTPIIHQPSIQMHSIPLNEPPNKLSDLPQKDADDDQHSYDRDAESLSE
EQISQDDFQKKPNNNSIDSDNDGSVVCEKVNDLPENPMSSSQINTRHASWASEVFPDNQV
TVDRAPKRRKTETELIDEISDRETDTKIRIDQTDSKVFDNGFYNQIDENDVQNPHNIDMQ
IVNDTFTIDESSEDDEPNYFRQSLTVNIDELHYKWQKDTNKSNALTNENSQKLYSEKLEK
AGIENFDNSQAAEQALSRVLHKTDFENLEILGQFNLGFMIVKRKAVNDNGLQENDLFIVD
QHAADEKYNYEKLQLNSRIQSQKLIKPRTLDLSASDELTVFDNLETLKQNGFEIQVDGDG
ASGRRCQLVALPLSKTTVFDLRVDLEELIHDINENPSQVPRCTKAKDMFASRACRMSVMV
GKSLKKKQMTSIVRNLSTLKQPWVSIFKLLSLIKLLICVELSSWEANAAAPTKLREQAG
NT seq 2520 nt   +upstreamnt  +downstreamnt
atgtccctaaattcaatcgatacaaaaacaaaaaataaattgcaatctgatcaagttatt
ttagatctacaatctgccgtcaaagaattaattgagaacagtttagacgctaattcaagc
ataattgaaattaatttctataattctggtttcgatgggtttaaggttattgataatggc
tttggtatccacgaatcatccttctcatccttaactaagaagcactttacttcaaaatta
tccaatttcgacgacctcaacaatttatgcactttcggtttccgtggtgaagccttatcc
agcttatctaccatctctaagtccttcgattgcttaactgcaaccgatgtgacgtcacca
aaagctacaaacatctccttcgataacaaaggaaacattactcagttaagacacaatatc
ccaagacaaaggggtaccaccatctctttgtctactttattctacaatttacccgttcga
agaagggagttcgaaaagaaccttaagagagaattcagcaaagctatcaacttgttacaa
tcttatgcgttatgccctttacactcaagtgtcaaattcaatatttccaactataataaa
gctaataagaagtctatcatctttcaaactgcaggtaaatcttctttaccttcttcaatc
gcttctgtattcggctcaacagcaaatcaatctttagttccgctctctttagaattacct
gttcaagtcgatccttctatagcaaaacgtgagggcataactaacacttcgttcactgta
aacctgattggttcaatatctaaacccttattcgctcatggaagatctacttctgacaga
caatacttttatatcaatggtagaccttgtaatctaccaaaagtcgccaaaacaattaat
tccctattcagatcttacattaatcaatcttatccttttatcgtcgctgattttaagata
cccactgatgcttacgacgtcaatattactcctgacaagcgtacaattttcttacacttt
gaatctagcttaatagattcactcaactaccatttgaacctattttttgaaccatttaga
ggtcactttacgataaacaaacagtctcaatcagttccaacgccaattattcatcaacct
agcattcaaatgcactcaatccctttaaatgaacccccaaataagctttctgatttacct
caaaaggatgctgatgatgatcaacacagctacgatagggatgctgagtcattgtcagag
gaacaaattagtcaagatgattttcaaaaaaagcccaataacaactcaattgatagcgac
aatgatggttcggttgtgtgcgagaaggttaacgatttacccgaaaatccaatgagtagc
tctcaaataaatacgagacatgcttcatgggcatcagaggtgtttcctgataatcaagta
acagttgatcgagcacctaaaagaaggaaaactgagacagaactaattgatgagattagc
gatagagagactgacacgaaaattcgaatcgatcaaactgattcaaaagtttttgacaat
ggcttttacaatcaaatagatgaaaatgatgtccagaatcctcataacattgacatgcaa
atcgtgaatgacacttttacgatcgacgaaagctcagaagatgatgagccaaactacttt
agacagtcactgactgttaatattgacgaacttcattataaatggcaaaaagatacaaac
aaatcgaacgcattgactaatgaaaattcgcaaaagttgtactcagaaaaactggaaaaa
gctggaatagagaactttgataactctcaagctgcagagcaagcgctatcgcgagtattg
cacaagactgactttgagaatctagaaatacttgggcagttcaacttagggtttatgata
gtcaaacgcaaggctgtcaacgacaatggtctacaagagaatgatctctttatcgttgac
caacatgccgcagatgagaagtataattacgagaagctacaactcaattctaggatacag
tctcagaagcttatcaagccacgtactctcgatttaagtgcgtctgatgaattgacagtt
tttgacaacctggagacgctcaaacagaacggcttcgaaattcaagttgacggagatggc
gcgagtggtagacgatgccaattggtagctctgcccctgtcaaaaactacagtgttcgat
ttgagggtagatttagaagagctgattcatgacatcaatgaaaatccaagccaggttccc
cgatgtacaaaagcaaaagacatgtttgctagtcgagcatgcagaatgagtgtaatggtt
ggaaaatccctgaagaagaagcaaatgacaagcatcgttaggaatctttcaacactcaaa
cagccctgggtgagtatcttcaaactactatcattgattaaactcctaatctgtgtagaa
ctgtcctcatgggaggccaacgctgcggcacctactaagcttagagaacaagcaggatga

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