Wallemia ichthyophaga: J056_003136
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Entry
J056_003136 CDS
T03457
Name
(RefSeq) Cohesin subunit psc3
KO
K06671
cohesin complex subunit SA-1/2
Organism
wic
Wallemia ichthyophaga
Pathway
wic04111
Cell cycle - yeast
wic04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
J056_003136
04113 Meiosis - yeast
J056_003136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
wic03036
]
J056_003136
Chromosome and associated proteins [BR:
wic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
J056_003136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SCD
HEAT_SCC3-SA
STAG
HEAT
HEAT_2
Motif
Other DBs
NCBI-GeneID:
20376088
NCBI-ProteinID:
XP_009266715
UniProt:
R9AN88
LinkDB
All DBs
Position
Unknown
AA seq
1327 aa
AA seq
DB search
MAVPVSSNVTSPQPSTNSQLRPARVRRSAAVSGNPEVMDVDADVNSDSESDAVQDSDHYS
HENIPSPAESSHDEFEEVAPKKKPRKSAMKGAGAALKRKKNVQIRKDHDSDNFLYETLTE
ATVDLPTAVQDWLAMYVDSRREALRILINCLIKSTGCQHTITSDQVVDFDSIPDVVDSLE
RSFKTQSNTAYPLIHRVGTLKKIGGSISKLLEDLVSAASESSALYDVSEESETLMETSQQ
WITSLSSSPLRAFRHTATVWGLSLSSALCKLAKDFDKQFSKETRRRQSSNKSDSLLSRKT
TVENYIQEITDGLFIHRYRDVEPIIRSECVKALGSWMKTWPNHFLEGNYLRYTGWLLSDT
DSSVRHAAIESLITLYGSDDHLTPLQHFTDRFKQRLLEICLKDVDAPVRISALKLMTAID
GHELLEDNERIQVSKLAFDINPKIRKTCGDFWQRLVEDEQQRLRGTLGDDDDDTEKEDID
QLTMIKAFTSLLVTSTRSIDGNSSVNDGNEVGSRLRIALDDLWSSLQVARDWKAMLSTLI
MDHSSSDDDLAQFKLKEDEENVLVELFCACVSHIHAEANPSTESTGRKKKKIVDDTDYTS
VSRQLMQDLPSLFSKHQAIPSRIADLLSLPRYMQLTLYLDMRMESEFESLYNEICQQLQK
HSLPSVLEAATDSIFALNDAGVFVHISERNLNALVYNLTLALKTLVAGQEIEDVDIDQES
VSRLESALLRLVYVVTRSNISDTLNESSAESANVCQIVQALASRGALGYEIESKMVENAL
QLLFLDLLWTVSELVKLQPTTTDNEDSEYEFKKMQVKTLRDNLYHLAIDLSVGSTSNSTD
SVKSKGFKILMEIVILFADNRPKELSTEVSKHTSMEFSEETQLRCMGYVESEIDKFAEEI
HVNADNDDDEAAEEIQNDKQSSDEDEAPKIKKRKSKTTPKKQAPKQNKQKKQELTLALQP
DRINYTYEFSETIAVVVKAIRLGVLSIDKLPVILAHHGRFGVLFDSLNKLALDAIREIAL
YAGSEYYLGIVHVVTTSLISAHELLLEGKVEDESRLLALGRSLSSSLVLRGAQLKIVSRA
SSNVVVAIHKRVISELFDDLKPLVNEQRKNSTKISQINSGFKALQHLLAVGPSSLIEGRH
ALEVKNFYDEQLKAAEIELSTSSKIWEGARSYEKKLVTLIAKDKVLVKHRNAQEKDVHSR
ASREKHPRAAATAGEGLSKDMVGSEDEGEEGSEDGGEDEVEDEEQNAEIDEHNENDEHDE
EQLPDEPTADIQRDSSPLSSLTSHHDENENENASQTSKKRSRQSDAPSPSKGLQMSNTLR
TKRSRID
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggctgttccagtgagctcaaacgttacatcgcctcagccatctacgaactctcaattg
aggccggcgcgtgtacgtagatcggcagctgtcagtggtaatcctgaggttatggacgtc
gacgcagacgtaaattctgactctgaatctgatgccgttcaagactctgatcactattcg
cacgaaaatatcccatctcctgctgaatccagtcacgatgagtttgaagaggtcgcccct
aagaagaaaccgaggaaatccgccatgaaaggcgcaggcgctgctttaaagagaaagaag
aacgtccagatacgcaaagaccacgattctgacaactttctctacgaaacactcacagaa
gctaccgtcgatcttccaactgctgtacaagactggctagcgatgtacgttgacagccgt
cgcgaagctttgcgaatcctcatcaactgcctgatcaagtccaccggctgtcaacacaca
attacatcagatcaagttgtcgattttgactctattcctgatgtagttgactctttagaa
cgctctttcaaaacccagtctaataccgcataccctctaatacatcgtgtcggtacgctc
aagaaaattggcggttcaatatcaaaacttctcgaagatttggtcagcgcggcttctgag
tcttcagcactctacgatgtatctgaagagagtgaaactttgatggagactagccagcag
tggattaccagcttatcgtcttccccactccgcgcatttagacatacagccacagtctgg
ggtctttcgctatccagcgcgctatgcaagcttgctaaagactttgataaacaattctca
aaagaaaccagacgccgtcaatcttccaataagtcagattccctcctttcacgcaagaca
actgtcgaaaattacattcaagagatcactgatggtttatttatacacagatatagagac
gtagaaccaattatccgatcagaatgtgtaaaagcactcggcagttggatgaaaacatgg
ccgaaccactttttggaaggcaactacttgagatacacaggatggttgctttcagacacc
gactcttcagtcagacacgccgctattgaatcactgattaccctgtatggttcagacgat
catctcactccactgcagcatttcactgatagattcaaacagcgtctgttggagatctgc
ttgaaagatgttgatgcaccggttagaatttcagcgctcaagcttatgactgctatcgat
ggccacgagctgcttgaagacaatgaacgtatacaggtctcaaagttagcattcgatata
aatccaaaaatacgcaaaacatgtggagatttttggcaaagattggtggaagatgagcag
caaagacttaggggaactcttggtgacgatgatgatgatactgagaaggaggacatcgat
caactaacaatgatcaaagcctttactagtcttcttgtgacatccactcgctccatcgat
ggtaatagcagcgttaatgatggaaatgaggttggtagtagattaagaatcgcattggat
gatctctggtcatcgttgcaagttgcgcgcgattggaaggcgatgctgtctactttgatc
atggaccattctagtagcgacgatgatttagctcagttcaagttgaaagaggatgaagag
aatgtgttagttgagttgttctgcgcttgcgtcagccatatacatgccgaggcaaaccct
tcgacagaatcaaccggacgcaagaagaagaaaattgttgacgatacagactatacttca
gtctcgcgtcaactcatgcaagacttaccaagtcttttctccaaacaccaagccattccc
tctcgtatagctgacctgctctctttgccgagatatatgcagttgacactctatttggat
atgagaatggaaagtgagtttgagtcactgtataatgaaatttgccagcagcttcagaag
cattctctgccgtccgtattggaagctgctacagatagcatatttgctttgaatgatgca
ggtgtttttgtccacatcagcgaaaggaacttgaatgctctggtgtacaatctgacatta
gctctcaaaactttagttgctggtcaggagattgaagatgtagatatcgaccaagagagc
gtcagcagacttgagtcggcgttgttgagactggtttatgtcgtcactaggagcaacata
agtgacacactgaatgagagctcagcagaaagtgcaaatgtctgtcaaattgttcaagct
ttggctagtagaggtgcattaggctacgagattgagtcaaagatggtcgaaaacgctttg
cagcttctcttcttagatcttctctggactgtgtctgaacttgtgaagttgcaaccaacg
acaacggacaacgaagactctgagtatgagtttaagaagatgcaagtcaagacactccgc
gacaatctctatcatcttgctattgacttgtcggttgggtcgacatcaaactcgacagac
agcgtcaaatcgaagggattcaagattttaatggagatagtcatattgtttgcagacaac
cgtccaaaggaattgagcactgaagtttcaaagcacacttcaatggagtttagtgaagaa
acgcagctgagatgtatgggatatgttgagtcagagatcgataagtttgccgaggagatt
cacgttaacgctgacaatgacgacgacgaagctgcagaggaaatccaaaatgacaagcaa
agcagtgatgaggatgaagcacctaaaatcaaaaaaaggaagtcgaagacaacaccaaag
aagcaagcacccaagcagaataaacaaaaaaagcaggagttgacattggcgctccaacca
gatcgtatcaattacacatatgagttttcagagacaatcgctgtcgtagtgaaagctatt
agacttggtgtcttgtcgattgacaagctgcctgtgatattggcgcaccatggcagattt
ggtgtgctctttgacagcctcaataagctagctttggatgcaatacgcgaaattgctttg
tatgctggtagtgaatattatctggggatagtgcacgttgttacaacctcactaatatca
gcacatgagctcttgttagaaggaaaagttgaagatgaatcacgtttgctggctttgggt
agatcattatcttcgtcgttagtgttacgaggtgcgcagttgaaaatagtaagcagagcg
tcttccaatgtcgtagttgcaattcacaagagggtgattagcgagctatttgacgatctc
aaaccacttgttaatgagcagcgcaagaactcgacaaagatatcacaaattaattcgggt
tttaaggcgttgcagcaccttttagctgtcggtccatctagtctcattgaaggcagacat
gcactggaggtgaagaacttctacgatgaacagctcaaggcggctgagattgagttgagc
acgtcgagcaagatatgggagggcgcacgttcgtacgagaaaaagctcgtcactctgata
gctaaagataaagtactcgtcaagcataggaatgctcaggagaaagatgtacactcgcga
gcatcccgtgagaagcatcctcgagctgcagccacagctggtgaggggctctccaaagat
atggttggcagtgaagacgaaggtgaagagggaagcgaagatggtggtgaagatgaagtt
gaagatgaagagcagaatgctgagattgacgaacacaacgagaatgatgaacatgatgaa
gagcaattgccagatgagcctaccgctgatattcaaagggactcatccccactatcctct
cttactagccatcacgacgagaatgaaaatgagaatgcctcgcaaacatccaagaagagg
tctcgtcaatcagacgccccgtcgccaagtaaaggcctgcaaatgtccaacacactcaga
acaaagcgcagtcgcattgattag
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