Wallemia ichthyophaga: J056_003180
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Entry
J056_003180 CDS
T03457
Name
(RefSeq) putative mRNA-splicing protein ubp10
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
wic
Wallemia ichthyophaga
Pathway
wic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
J056_003180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
wic03041
]
J056_003180
Spliceosome [BR:
wic03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
J056_003180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
DUF674
Motif
Other DBs
NCBI-GeneID:
20376132
NCBI-ProteinID:
XP_009270432
UniProt:
R9A940
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MAKREVQSNLYLDTINRHLLDFDFEKVCSVSLTNKSVYCCLVCGRYFQGRSKSSPAYNHS
IDEEHHVFLSLDRKEFYILPEDYKVEDNSLSDIVRVLQPAYTGEEVNQLDNAVISHDLTK
QPYLCGYVGLNNMKKNDYANVIIHTLTHINPLRNAFLLMDTYRSELLERFSTLNKRMWNK
HLFKSQVSPHELLELMSKLSKNRFNIQNSADPVEFLTFLLNSLHKDLGGSKKPDSSVIYR
LFQGMLRITSQKIIQLDENEEIDKKFIEEDKIAINTTPFLILSCDLPPKPVFSDDENIIP
QVSLAEVLRKYDGVHKQEQFGQRRSYQLVKLPKYLIIHFKRFSKNKFKEEYNQTIINYPI
SGVDFKDYVENSDGDESTVYDLVANICHEHDNNNSSKWKSQLKSPLTNDDGTNKWYQLQD
LFVEEIDRRLIFLGETYLQVWQQRD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggccaagagggaagttcagagtaatttatacctagacacgatcaaccgccacctgcta
gatttcgattttgagaaagtttgtagtgtttcgcttacgaataaatctgtctactgctgt
ctcgtttgtgggcgctactttcaaggccggtccaagtcgtcaccagcttataaccactca
atcgacgaagagcatcatgtcttcttgagcttagacaggaaagagttctacattctccca
gaggattacaaagtagaggacaactcgttgagcgatattgtccgagttcttcaaccagca
tacaccggggaagaggtcaaccagctcgataacgcagtgataagccatgacctcactaaa
caaccctatttgtgtggatatgtcggtttgaacaatatgaagaagaacgattacgcgaat
gttatcattcatacgctcacacatatcaatccgctcagaaatgcattcctcctcatggat
acttacaggagcgagctattggagcgctttagcacgctaaataaacgaatgtggaataag
catctattcaaatctcaagtcagtcctcatgaactattggaattgatgtcaaagctgtcg
aagaatagatttaatatacagaactcagcggatccagtcgaatttcttacatttcttctc
aattcccttcacaaggatttaggtggtagcaagaagcctgatagtagtgtgatatacagg
ttatttcaaggcatgttgcgaataacgtcgcagaaaatcattcagctcgacgaaaatgaa
gagattgataagaagttcatagaagaggataagatagctatcaataccacaccattcctc
atcttatcgtgcgatttaccgcccaaacctgttttcagtgacgatgagaacattattcca
caggtatcgttagctgaggtgctaagaaagtatgacggagtgcacaaacaagagcaattc
ggtcagagacggtcttaccaattggttaagttgcccaagtatctcataatacacttcaag
aggttttccaagaacaaattcaaggaggagtacaatcagacaatcataaactacccaatc
tcgggtgtagactttaaggattacgtggagaatagtgatggtgacgagagtacagtatat
gatctggtagcgaatatctgccacgagcacgataacaacaacagcagtaaatggaaatcg
cagctcaagtcgccgttgacaaatgacgatggcactaacaagtggtaccagttgcaggat
ttgtttgttgaagagatcgacagacgacttattttccttggtgagacatatttgcaggtt
tggcaacagagagattag
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