Wallemia ichthyophaga: J056_003208
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Entry
J056_003208 CDS
T03457
Name
(RefSeq) ATP-dependent RNA helicase ROK1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
wic
Wallemia ichthyophaga
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
wic03009
]
J056_003208
Enzymes [BR:
wic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J056_003208
Ribosome biogenesis [BR:
wic03009
]
Eukaryotic type
90S particles
Helicases
J056_003208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
DUF3646
Flavi_DEAD
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
20376160
NCBI-ProteinID:
XP_009270460
UniProt:
R9A930
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MSDAFSLLTKSGTFFNKNKFNNDIKLFNKSQRQDAQQVNQHDTQQLPKDLDFFGDLKHSD
KPVKPAKQQSETQYTQYTPPTIDESNKLRKQMHVNVSDNAQPPLRSVQELKTALNFENYL
MRNISFLNELTPVQSQAIPLACSDRDVLAVAPTGSGKTLAYLLPLLHTLAQPKKEGFRAV
IISPTRELAQQIRNELARVGIGRRWRVSILSKANQATIKSDPSTRSKHDILISTPLRLKH
AIESEEVDLSNVRNLILDEADRLLEMGFVDQVDTIVGACSHPSLRKSLFTATLPASVEEI
AQNILRLPVRMLIGRKDAAAQGVNQKLTYVGREDGKLLALRQLVQEGQMKPPVLIFVQSV
DRANELFNELVYDGVRVDVIHGERTPAQRDDVVRQFRRGDVWVLIATDVLARGIDVQAIN
LVLNYDFPQSPASYVHRVGRTGRAGRVGQAITFFTNDDAPYLKSVVNVMKSSGCDVPEWM
LKLKKPSSNQRKALKKRPIERETVHEAAGTNVGREDVRKHKQIVNASKRRKVANEVKEQD
QHQEQDQEHKHSDDQSR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgccttcagtttgctgaccaaatccggtactttctttaataaaaacaagttt
aataatgatataaagctgttcaataaatctcagcgacaagacgctcagcaggtcaatcag
catgacacacagcagctcccaaaagatttagatttctttggagacttaaagcattccgac
aaacccgttaaacccgctaagcagcaatcagaaactcagtacacacagtacactccacct
acgatcgatgaatccaacaagcttaggaagcaaatgcatgttaatgtatcggataatgct
cagcctccactaagatctgtacaagaactcaaaacagctctcaactttgaaaattacttg
atgcgcaatatcagcttcttaaatgagctcactcctgttcaatctcaagctattccactc
gcttgctctgatagagatgttctcgccgttgctccaactggctctggtaaaactctcgct
tacttactccctcttctccacacgctcgcacaaccaaagaaagaaggtttcagagctgta
atcatctctccaacccgtgaactcgctcaacaaatacgcaacgagctcgcaagagttggt
attggcaggagatggcgtgtttccattctcagcaaagcaaaccaagctactatcaagtct
gatccttcaacacgctccaagcatgacatcctcatttccacccctctccgccttaaacac
gcgatcgagtctgaggaagtagatttgtcaaacgtgcgcaacctcatcctcgacgaagct
gatagattactcgaaatgggtttcgtagatcaggtagatactatcgttggcgcctgctct
cacccttcactgcgcaaatctctcttcacagccacgctgccagcctcagttgaagaaatt
gcacaaaatattctccgcctaccagtcagaatgcttattgggcgcaaagacgcagcagct
caaggcgttaaccagaaactaacctatgtcggtagagaggatggcaagctgctcgctctc
agacagctcgttcaagaaggacagatgaaaccgcctgtgctaatattcgtgcagagcgtc
gacagggcgaatgaactcttcaatgagcttgtttatgatggagtcagagttgatgtcatc
cacggtgaacgcacaccagctcagcgagacgacgtagtgagacaattccgcagaggtgat
gtgtgggtgttgatcgccaccgacgttctcgcacgcggtatagacgtacaggctatcaat
ctcgtacttaactacgattttcctcaatcccccgcttcgtatgtccatagagtcggtcgt
acgggcagagctggcagggtcggtcaggccatcaccttcttcactaatgacgacgctcca
tatctcaaatctgtcgttaatgtcatgaaaagcagcggatgcgacgtgcctgagtggatg
ctcaaacttaagaaaccttcaagcaatcagcgcaaggctttgaaaaagagaccgatcgag
agagagaccgttcacgaagctgctggtaccaacgtcggtagagaggatgtaagaaaacac
aaacaaattgtcaacgcttccaagcggaggaaggtggcgaatgaggtgaaagagcaggat
cagcaccaggaacaggaccaggaacacaagcatagtgatgatcaatctcgataa
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