Wallemia ichthyophaga: J056_003403
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Entry
J056_003403 CDS
T03457
Name
(RefSeq) DNA topoisomerase 3
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
wic
Wallemia ichthyophaga
Pathway
wic03440
Homologous recombination
wic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J056_003403
03460 Fanconi anemia pathway
J056_003403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wic03032
]
J056_003403
03400 DNA repair and recombination proteins [BR:
wic03400
]
J056_003403
Enzymes [BR:
wic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J056_003403
DNA replication proteins [BR:
wic03032
]
Eukaryotic type
DNA Topoisomerases
J056_003403
DNA repair and recombination proteins [BR:
wic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
J056_003403
FA (Fanconi anemia) pathway
J056_003403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
zf-CCHC
zf-CCHC_3
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
20376355
NCBI-ProteinID:
XP_009266901
UniProt:
R9AS06
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MTVKYLCVAEKPSISKSITQILSSGSFNTRSTSSKFIKNYDFSYKMSGYNGRQVDFTVTA
VAGHLTTAEFPKEMRKWHSCDPVQLFNGRVEISTSSSMSAIENNLKSEARRASHLMIWTD
CDREGEHIGSEIVNVCRQANPRIEVIRAKFSAIIPNQIHHAARNPVMLDMKQVRAVETRI
ELDLRIGAAFTRLMTLNLSKQVAELDGKLISYGPCQFPTLGFVVDQYQRIKDFITENFWY
IFLSINHREENGRKKAVTFNWKRDRLFDAQIAFLLYERCITNPTARVTKVETKPHTKYKP
YPLTTVELQKSGSRLLKLSPKQVLDIAEKLYQQGFLSYPRTETDQYDPSFNFESLIEKQT
ANSTWGEYAQSLQFDRFDRPRNGKKNDKAHPPIHPTAHAPSLSGNEKRVYELITRRFLAS
CSKDAKGKNTTAELEMAGEIFKASGSVLIEKNYLEVYIYEKWSNQTIPNFEQGEVFQPSI
CELREGKTTPPTLLTEADLVSLMDKNGIGTDATIAEHIHKIIDREYVMEHKLGSTKYLVP
STLGVALVEGYNKMNFDKSFAKPQLRRENEEKMNMIGEGIAQKSDVLLESINQYRDIYNR
SALQFATLVNSVKHYLQNADAFDDNVIAENDQNARGEDEGGGGFGGFNNNNNNDNSDSDM
DDAPPPPRGRGRPRGTTSQRTTGASRTSRSNGNASEFRVTQMYEPPTKSNSNHKAQPPKE
GQVRCKCDLSAKRFVTSQGANKGRAFWKCPNTSKTAQCGFWSWEDSMDSPNTSAQVVDDS
EEDLLGDELIADDDGEIPYCDLCSRNGHWPARCTNPTTGPAPKSTSTVKSKKSSSSGVGV
NNTKKGDTCYKCNKKGHWASNCPNEGKPPAKRKTYTKKSTQKKQRRT
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaaaatatttatgcgttgctgaaaaaccttcgatatcgaaatcaatcacccag
atcctctcatcgggcagcttcaatacacgcagcacttcgagcaaattcataaaaaactat
gacttcagttataaaatgtctgggtataacggtcgccaggtagatttcactgtcactgcc
gttgctggtcatctcaccacggctgaattccccaaagagatgcgcaaatggcacagttgc
gatcctgtccaattatttaatgggagagtggagataagcacatcaagcagcatgtctgct
atagagaataatctcaaaagtgaagctagacgcgcgagtcatctgatgatatggacagat
tgcgatcgtgaaggtgaacatattggatcagagattgtgaatgtatgcagacaggccaat
ccgagaattgaagtgattcgggcgaagttttcagctatcatacccaatcagattcatcac
gctgctcgtaatcctgttatgttggatatgaagcaggttcgcgctgttgagacgcgtatt
gaattggatttacgcatcggtgccgcttttactagactaatgactctcaatttatcaaaa
caggtggcggagctcgacgggaagctgatatcatacggaccttgtcaatttccaactttg
ggtttcgtagtcgatcaataccagcgtataaaggattttattacggaaaatttctggtac
atcttcctctctatcaaccatcgtgaagaaaatggcagaaagaaagctgtgacattcaac
tggaaacgtgatcgactgtttgatgctcagattgccttcttgctgtatgagagatgcatc
actaatcccacagcaagagtgaccaaagtggagaccaagccacacactaaatacaagccc
taccctttgactacagttgagctacagaaatctggatctcggttgctaaaactttctccg
aaacaagtcttggatatagctgaaaaattatatcaacagggctttctttcatatccacgt
acagaaacagaccaatacgatccatcgttcaacttcgaatcgctgatagaaaagcagaca
gccaactcaacatggggagaatatgcacagtcacttcaatttgatagatttgatagacca
cgtaacggaaagaagaacgacaaggcgcatccaccgatccatcctaccgcccatgcaccg
tcattatctggaaatgagaagcgagtatatgagttaattacacgcagatttcttgctagt
tgctccaaagatgctaaaggaaagaacacaaccgctgagttagagatggctggagagata
tttaaagcgtcggggtctgtcctgattgagaagaactatttagaggtatacatctacgag
aaatggtcaaatcaaaccatacctaattttgaacagggtgaggtatttcagccgtctatt
tgcgaattaagagagggtaaaactacaccaccgacattgctcactgaagctgatctcgtc
tctttgatggacaagaatggtataggcactgatgccactattgctgaacatatacacaaa
attatcgacagagaatatgtcatggagcacaaattgggatctaccaagtaccttgtacct
tctacgctcggcgttgcactagttgaaggatacaataagatgaatttcgacaagagtttc
gctaaacctcaactcaggcgggagaacgaggaaaagatgaacatgataggtgaaggtata
gcccagaagagtgacgttttgctcgaatcgattaatcagtatagagatatatacaacaga
tcagcccttcaatttgcaactctggtgaatagtgtgaagcactacctacagaatgctgat
gcatttgatgacaatgtcattgcggagaatgatcaaaatgcccgaggcgaagacgaaggc
ggtggcgggtttggtggattcaataataacaacaacaacgacaatagcgatagcgatatg
gatgatgcacctccgcctcctcgcggcagagggcgaccgcgcggaacgactagtcaacgc
acgacaggtgcaagcagaacaagtcggagcaatggtaacgcatctgaattcagagtaacg
cagatgtatgaaccaccaacaaagtccaactctaatcacaaagctcaaccgccaaaagag
ggtcaagtgcgctgcaaatgtgacctctcagctaaacgattcgtcacctcacaaggtgca
aataaaggcagggcattttggaaatgtcccaatacttcaaagactgcgcaatgtggtttc
tggtcatgggaggattcaatggatagtccaaatacatctgctcaagttgttgatgatagt
gaggaagatttgttgggtgatgaattgatcgcagatgatgatggtgagatcccctactgc
gatctttgcagtaggaacggacattggccggcaagatgtaccaatccgacaacaggacct
gcacctaaatccacatccactgtaaaatccaagaagtcatcgtccagcggtgtcggtgtt
aataatacaaagaaaggtgacacatgttacaagtgtaacaagaagggacactgggctagc
aactgtcccaacgaaggcaaacccccagcaaaaagaaaaacatataccaagaaatcaaca
caaaagaagcaacgcagaacatga
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