Wallemia ichthyophaga: J056_003407
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Entry
J056_003407 CDS
T03457
Name
(RefSeq) hypothetical protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
wic
Wallemia ichthyophaga
Pathway
wic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
J056_003407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
wic03009
]
J056_003407
Ribosome biogenesis [BR:
wic03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
J056_003407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
NBCH_WD40
Beta-prop_DCAF4
Utp12
ELYS-bb
PEP5_VPS11_N
Beta-prop_WDR11_1st
Lactonase
NAS
Motif
Other DBs
NCBI-GeneID:
20376359
NCBI-ProteinID:
XP_009266905
UniProt:
R9AL95
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MAPARKKQKSTKPTQSIQPTQPNQPIKSIQPRLFAPFRALGFVTNDIPFNILSRSTRDAN
KLSAQIVTCLGNSWAMWDLSTMRLLFVSPDCENPINSIANDGTYVYVSAGPHLIKYSRGK
QISKFEYPEPSELGTITLFGSQLLALRANGNGLIVFDNHSNAKSEFSHEIQFPFNFTATQ
ILHPSTYLNKIVVASAQGDLQLWNIRTRSLIHSFQSTHLRRSLPRPSTEAITSLEQSPAI
DVLAIGYSDGLISLYDIKSDEELLRMRMDGDLSINSITFRTDGEHIMATAASNGYIAFWN
LNEGGRLVNVLRDAHSESTSKIEFLPNQPVLISSSGDNSVKQWLFDSPSVLPRLLKFRAG
HTAPPHHIRYYGEDGKTILSAGRDNSLRYMSVVRDSRSFEMSQGSLARKAAQLALPMAAL
RLPPITSLAFATQRSKDWDDVLTSHADSADSYTWHVQDKKLGKHKLVMDDGVARSVTVSV
CGNYGLIGTDKGKINQFNMQSGIKRRVLSIQNKYENKDALAISGVISDALNTTIVASTLD
GFLYFFDFHNGALIDTLQLRGGVHQLILQRDNGIMAAICADNVVRLVDIETRRVVREFRG
FTKRVSDIAFSPDSKWLVASSYDCIIRTYDIPTGTLVDAFRVTSLPTSLTFSPTGDFVAT
THTDSVGIYLWANKTQLVEVPLRPISQTDVIDVGLPTMQGEVEDEELGQLESEPIVQHAL
GGIKDQLSDGLVTLSTMPRTRWQTLLNLDTIRERNKPAEPVKAPEQAPFFLPSLMDTQNN
TSGDKMSMDVDKQDTHRLVEGALGIETQLSKMLHSAQSDKLDQLFTYLHGITPANNDADV
RSLMPADLELFLKALSERLGQQKDFDTVQAQMGLALRVHADILSSDSSLRESLSNLAQAQ
RKECHRLFDLTNYSLGVLSFVRDIPLQ
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcacctgctcgtaaaaagcaaaaatctacgaagccaacacagtcaatacagccaacc
caaccaaatcaaccaatcaaatcaatccaaccaaggctatttgctccattcagagctcta
ggattcgttaccaatgatattcccttcaatatcctatctagatccactagagacgcaaat
aaattatctgctcagattgtaacgtgcttaggaaatagctgggctatgtgggatctttct
accatgcgccttctctttgtttccccagattgtgaaaatccaatcaactctattgcaaat
gatggtacatacgtttatgtctctgccggtcctcatttgatcaagtatagtaggggtaaa
caaatttctaaatttgaataccctgagccttcagaactgggcactatcacgctcttcggt
agtcaattactcgcactcagagctaatggaaatggtctaatcgtttttgataatcattca
aatgctaaatcagaattctcacacgagattcaattccctttcaatttcactgccactcag
atcctccatccatccacttatctcaataaaatcgttgtagcatctgctcaaggtgattta
cagttgtggaatataagaacaagatcactcattcactccttccaatcaactcaccttcga
agaagtcttccaaggccttctacagaggctattacttccctcgagcaatctcctgcaatt
gatgttctcgccattggttactctgacggtctaatttcactctacgatatcaaatctgat
gaagaactcctaagaatgcgtatggatggcgatctctccatcaatagcatcactttcagg
actgatggtgaacatatcatggctacagccgcatctaacggttacatagcattctggaat
ctcaatgaaggtggtagattagtcaatgtgttaagagacgcacacagtgaatctacatcc
aagatagagttcctaccaaatcagccagtattgatatcttccagtggcgacaacagcgtg
aaacaatggctattcgactcgcccagcgttctcccaagactgctcaagttcagagctggt
catactgccccaccacaccacatacgctattacggtgaagacggaaaaacaattctcagt
gctggcagagataacagcttgagatacatgagtgtagtaagagattcgcgcagtttcgaa
atgtctcagggctcactcgctagaaaagctgctcaactcgctctaccaatggctgcgttg
aggttaccgcccattacatcactcgcatttgcgacgcagagatctaaagactgggatgac
gttcttacctcacatgccgacagtgctgactcctacacttggcatgtccaagataagaaa
cttggtaagcacaagctggtgatggatgacggcgtcgctcgatcagtcactgtatccgtg
tgcggtaattacggtctcatcggtacagataaaggtaagattaatcaattcaatatgcag
tcgggcatcaagagacgtgtactgtctatacagaacaagtacgagaataaagatgcactg
gctatttcaggtgtcatcagtgacgctctcaacactaccatcgtcgctagtacattggat
ggattcctctatttcttcgatttccacaacggcgctctcatcgatacgctgcaactgcgt
ggtggtgtacaccagttgattctgcagcgagacaacggaataatggccgccatatgcgcc
gacaatgtcgtacgattagtagatatcgaaacaagacgtgtcgttcgtgaatttagagga
ttcacaaagagggtgtctgacatcgcattctccccagactctaaatggctcgttgcatca
tcgtatgactgtattatacggacatacgatattccaacggggacgttggttgatgcattc
cgagtgaccagtctgcccacctccctcaccttctctcctacaggagatttcgtagcgacg
acgcacactgattccgtcggtatctatctatgggcgaacaagacacagctggtggaggtt
ccactgcgacccatctcccaaactgatgtcatcgacgttggactcccaactatgcaaggc
gaagttgaggatgaggagcttggtcagttggagagtgaacctattgtgcaacatgcgctc
ggcggtatcaaagaccaattaagtgatggattggttacgctgtcgactatgcctcgcact
cgctggcaaacgttgctcaatttagatacaattagagagcgtaataaaccagctgaacca
gtcaaggctcctgaacaagcacctttcttccttccgtcgcttatggatacgcagaacaac
acttctggcgataagatgagtatggatgtggataaacaggatactcatcgcctggttgaa
ggtgctctcggtattgagacccagctgtcgaaaatgttacactccgctcaatctgataaa
ttggatcaactcttcacctacttgcatggaataacacccgccaacaatgacgcagatgtt
agatcattgatgcctgcagatctcgaactcttcttgaaagcattgagcgagagacttggt
cagcagaaagatttcgatactgtacaagcacagatgggattagctttgagagttcacgcg
gatatcttgtcatctgacagctcactcagagaaagtctatcaaacttagctcaggctcag
cgcaaagagtgtcacagattgttcgatctgactaattactcacttggtgtgctcagcttc
gttagagacatcccactgcagtag
DBGET
integrated database retrieval system