Wallemia ichthyophaga: J056_003417 Help Entry J056_003417       CDS       T03457                                  Name (RefSeq) DNA repair protein rad16   KO K10848   DNA excision repair protein ERCC-4 [EC:3.1.-.-] Organism wic  Wallemia ichthyophaga Pathway wic03420   Nucleotide excision repair wic03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:wic00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     J056_003417    03460 Fanconi anemia pathway     J056_003417  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:wic03032]     J056_003417    03400 DNA repair and recombination proteins [BR:wic03400]     J056_003417 DNA replication proteins [BR:wic03032]  Eukaryotic type   DNA Replication Termination Factors    Other termination factors     J056_003417 DNA repair and recombination proteins [BR:wic03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     Other NER factors      J056_003417 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Glyco_transf_15 ERCC4 TagH_C Pfc11_Rna14-15-ID Motif Other DBs NCBI-GeneID:  20376369 NCBI-ProteinID:  XP_009266915 UniProt:  R9ALA3 LinkDB All DBs Position Unknown AA seq 1357 aa AA seqDB search MELPLRFHREILRQLIPGTPDTATPDPSDTSTQDLDPCESGLLILARGLGLRRVVCSFLT LQSDPRRLVLLLNADSPEEDGIGDLLGTMGVAKPGLRVVNFDMISKQREELYKEGGLVSV TSRILVVDMLNGTIPVHLISGMVILHAEQVTPTSLETFITRIYRKYNKEGFLKAFSDNPE LFASGVSPLQTVLRSLGLRKVWIWPRFHETIQEDLDKRKADVVELYPSLTKSMLNLQHSI LQCMDATIQEIKKGNVANLDIDDFTVDNALFRSFDKIIKMQLLPVWHLIKPKTKRLIEDL STLRNLLSFLLNYSCVEFEELLESIYQSNLNEYKSSSTGNKTPSHWLYLDPADAIFSVAK ERTYKVVENGRGGGASWLPPNIVPVLEEQPKWGVLTEILAEIDNNIQFNKGLTQSENNMT LIMCGTNRTVIQLTEYLSQCEDDNSKTHSTHLKKKAPKMMKRLLRDHLEKFKANVGIMST NMKFNAQSNVANTNAGSPSKNSSSSDKNAVEQGNSQATSAALQRKEQFRRNEGATAYGHN RRRVRGGSVMASVASSRKTHNNLDANAESPLEAEAKQIAQFQSQRSGKDKEVIELSDEDD DEDYDFFDNLPQWLLTTDVNEIWPHDDNDEYGLMEEEDTLLIRAYRGDDDDALLDEIKPK FIVMYDPDPAFVRRVEVYKSSNPHIDIRLYFLLYNASVEEQRYLSGLRKEKDAFERLIRE KSTMLLPLFEKESTRAGTDHYLSALSARVAGGQQVVGDKQPIVVVDVREFRSSLPGILHS ANFDVQPTTLTVGDYVLDPTMVVERKSLTDLNQSFQSGRLFTQCEYMSTYYKTPILLIEF EENRSFSLETIAESKKNLHPAAAQKTRITGTSPTEIFQSRLVMLTISFPRLRIIWSSSPR QTAEIFSDLKVQREEPDVEKASGVGTDEAGLEDLIEENWTMTPVEVMKSMPGVSGKNYQY IPNKVNSIRHLVDMTNKDMRDILGVDQGNALYGFINQTISLVLLLSITQPTQYTPRILRL NNKDHKSSYHRPPLSNTNGLDPKDLQKAAFVVLARNSDLYSFLPSMRAVEDRFNSKFGYE WVFLNDKPFNDEFKAHTQALASSHCHYGTIPSDHWNQPSFINETLAAENRHNMEKLGVVP YANSVPYRNMCRFNSGFFWRHPLLNNFDYYWRVEPDISLYCDVDYDPFKFVAENDINYGF TVSLLEYEETIPSLWQTVKDFIRDHPEHIPKDNAMKFLSDDSGESYNRCHFWSNFEIANL NLWRSPAYKAFFDYLDQAGGFYYERWGDAPVHSIAAALFSRPDQIHFFEDFGYRHQPFQH CPQGDASLGRCYCDPSDNIDYQWYSCLSKYDALTGRH NT seq 4074 nt NT seq  +upstreamnt  +downstreamnt atggaactcccattgagatttcaccgggagattctgcggcagctaattccaggaacacca gacacggcaacaccagatccatcagacacttccacccaggacctcgatccctgcgaatct ggtctgttgatcctcgctagaggcttgggactgaggcgtgtcgtgtgctcgttcctcact ctccaatctgatccacgcagattggttctcttgcttaacgcagattcaccagaggaagac ggcattggcgatctactcggcacgatgggcgtggccaaaccaggcctcagagttgtcaat tttgatatgatcagtaagcagagggaggagttgtataaggagggtggcttagtgtctgtc acctcgcgaatcctcgtcgtcgacatgctcaatggaaccatacccgtacatcttatttct ggtatggtgattttacacgcagaacaagtcacaccaacctcgctcgagaccttcattact agaatttaccgcaagtataacaaggagggctttcttaaggcattctcagacaaccctgag ctctttgctagcggcgtctcgccactgcagactgttttacgttctttgggtctcaggaag gtctggatatggccgcgtttccacgaaactatccaggaagatctcgacaaacgcaaggct gacgtcgtagaactatacccatcgctgacaaagtctatgctcaacttacagcactctatc ctgcagtgtatggatgctacaatacaggaaatcaagaagggcaatgtcgcaaatctcgat attgatgacttcaccgttgataacgccctgttcaggagttttgacaagattataaagatg cagctactgcccgtctggcacctcatcaaaccaaaaactaagcgactgattgaagatctt agcacactgcgcaatcttctctcattcctgctcaactattcgtgtgtcgagtttgaagaa ttgctcgaatctatctatcaatccaacctgaatgaatataagagttcgagtacaggtaac aaaactccgtcacattggctgtatctcgacccagccgatgctatcttcagtgtagctaaa gagcggacatacaaagtggtcgagaacggtcgtggaggtggagcgtcgtggctgccgccc aacatagttccggtcctagaagaacagccgaaatggggagtgttgacagagatactggca gagatagacaacaacatacaatttaacaagggtctaacgcagagcgagaataacatgact ctgatcatgtgcgggactaataggacagtcatacagctaacagagtacctcagtcaatgc gaagatgataatagcaaaacacattcaacacatttaaagaaaaaggcacctaagatgatg aagaggttgctgagagatcacctcgagaaattcaaggcaaatgtgggaataatgtcaacc aatatgaagtttaatgcgcagagcaatgttgctaacacaaatgctggcagtccgtccaaa aattcatcgtctagcgacaagaatgcagttgagcaaggcaattctcaggccacttctgcc gccttgcagaggaaggagcaatttaggagaaatgaaggagctaccgcgtatggtcacaac agacgacgcgtgcgtggaggatctgttatggcatccgtcgcgtcatcgcgcaagacacac aacaatttagacgcgaatgctgaatcgccgcttgaagcagaagcaaagcaaattgcacag tttcaatctcagaggtctggcaaagataaggaagtgatagagctctcagacgaggatgac gatgaagattacgattttttcgataacctccctcaatggcttcttacaacagatgttaat gaaatatggccgcatgatgataatgacgagtacggattgatggaggaggaggatactttg ctcatcagggcttatagaggtgatgatgacgatgcgctcctggatgaaatcaaaccaaag ttcatcgttatgtatgatcctgatccggcattcgttaggagagttgaggtttacaaatca tccaaccctcacatcgacattagactgtacttcttgctgtacaatgcgtcggtggaggag cagaggtatttatctgggttgcgtaaagaaaaggatgcttttgagagactgatccgcgag aaatctacaatgctcctgcctctgtttgagaaggagtcgacgcgggcagggactgaccac tacttgagtgctctgtcggcgcgtgtagcgggtggccagcaagtagtcggcgataagcag ccaatagtagtggttgatgttcgagagttcagatcatcgctgccaggtatacttcattca gctaactttgacgtgcagcctacaacgcttacagttggagactatgtcttggatcctacg atggtagtcgagcgcaagagtttaacagatctgaaccagtcattccaatcgggtagactg ttcacacagtgtgaatacatgagcacatactataagacacctatactactgatcgaattt gaggaaaaccggtcgttctcactagagacaatagcggaatctaaaaagaatttacacccc gctgcagctcaaaagacgcgtataacgggtacatcacccacagagatattccaatcaaga ctagtaatgctgacgatatcgtttcctcggcttcggatcatatggtcgtcgtcgccgaga cagacagcagagatatttagcgatcttaaggtacagagggaagagccggatgtggagaaa gcgagcggtgtgggtacggatgaagcgggactggaggatctgattgaagagaattggaca atgacgccagtggaagtgatgaagagcatgcctggagtttcagggaagaattaccaatat atacccaacaaagtaaactcaatacgtcatttggtggacatgacaaacaaagatatgagg gatatattgggagtagatcaggggaatgcgctttatggtttcataaatcaaactatttcg ctggtgctgctgctgtccatcacccagcctacgcaatacacaccaagaatacttcgatta aacaacaaggatcacaaatcttcttatcaccgccccccactgagcaacaccaacggtttg gatcccaaagatcttcaaaaagctgcgtttgtcgttttagcgaggaattcagatctctat tcgttcctgccatcaatgagagcggtcgaggacagattcaatagcaagtttggctacgaa tgggtattcctcaatgataaacctttcaacgatgaattcaaagctcacacacaggcactc gctagttcacattgtcactacggtactatccccagtgatcactggaatcagcctagcttc atcaacgagactttagctgctgagaacagacacaatatggagaaacttggcgtcgtgcct tacgctaattcagtaccttatagaaacatgtgcagattcaactctggtttcttctggaga catcctctgcttaataactttgattattattggcgcgttgaaccagatattagtctctac tgcgacgttgattatgacccattcaaattcgttgcagaaaacgatattaactacggcttc actgtctctctcttggaatatgaagaaaccataccttcactttggcagactgtgaaggac tttatccgcgatcatcccgagcacattccaaaggataacgctatgaaattcctctcggat gactctggagagtcatacaaccgctgccacttctggagcaactttgagatagccaatctt aatctgtggagatcacctgcatataaggccttcttcgactacctcgatcaagcaggtggt ttctactatgagcgctggggggatgcaccggtgcactctatagctgctgctttattctct agaccagatcaaattcactttttcgaagattttggataccgccaccagccattccaacac tgcccacaaggcgacgcttctttaggacgctgctattgtgatccaagtgataatattgac taccaatggtactcgtgcttgagcaaatacgatgctttgacgggtagacattag

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