Wallemia ichthyophaga: J056_003517
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Entry
J056_003517 CDS
T03457
Name
(RefSeq) ATP-dependent DNA helicase hus2/rqh1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
wic
Wallemia ichthyophaga
Pathway
wic03440
Homologous recombination
wic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J056_003517
03460 Fanconi anemia pathway
J056_003517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wic03032
]
J056_003517
03400 DNA repair and recombination proteins [BR:
wic03400
]
J056_003517
Enzymes [BR:
wic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J056_003517
DNA replication proteins [BR:
wic03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
J056_003517
DNA repair and recombination proteins [BR:
wic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
J056_003517
Bloom's syndrome complex (BTR)
J056_003517
FA (Fanconi anemia) pathway
J056_003517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
RecQ_Zn_bind
Helicase_C
ResIII
SQHop_cyclase_C
Motif
Other DBs
NCBI-GeneID:
20376469
NCBI-ProteinID:
XP_009267015
UniProt:
R9ALK2
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MQVRNNLEDLRRRLGRPEASSTPLSSSKVPIKIDDDEPVASSGSGSVSSKINKANKFKPA
AVTSPASSGDHHPVASTSRAVPDSQQKRAPSSTPAQEPSNKRSRQQTQQIQHSQPYLPKA
SNGTITYADDSDDLINDTFTGDVLNGLDSQEPLPKPVEKLEKQEAPMRKVRQYNTDLDSL
EMPVIQNMLCTTLKKKDAVMQELLSFYEDDIVDGTVDRDYLRSEQQRLQDRIESLENALG
RVKKVNGVSSTAASMHGSSQSNAPSKQVRQEWQVRQERQEEQEPVDVDSSPVATKRPAMS
LRREPLGSVTNEDPPALSRSKSSIMPFADNMMDLDGVDLQSPILSDEDVATSKHMQVLRN
APQIQECSDIPDEDDVSIMEPSPKPTNPPPPAPKAEDYPRYTWSRDVEKVMHDMFKLNAF
RKNQREAIDATLDGRDVFVLMPTGGGKSVCYQIPACVDLGKTRGVSIIVSPLLSLIQDQV
QHLVSRDIPSYAYSGATALPDKRAIQDDLRRPKPVTRLLYVTPEMLGQSGAFKDILQQLH
AKSQLARFVVDEAHCVSQWGHDFRPDYTNLGQLRDEFPGVPFMALTATANERVKTDIKSS
LKMRGCVELKSSFNRKNLFYEIKPKHGKQVYADIQKLINSKFKGQTGIIYCSSKRSCEDV
ASKLKQEYGLPAQHYHAGLSREDRTKIQLNWQKNRFLIICATVAFGMGIDKPDVRFVIHF
SLPQSLEGYYQETGRAGRDGEHSHCVLYFAYKDTTTINFLIDNGDGTHEQKATQRSNLRQ
VVQFCLNKTDCRRTQVLNYFGEQFDPRKCHKTCDNCFEGVGTEKQDVTEESKNAVSLVKE
VFKDGVTMLHCVDAFKGSGAARIRDKGHDKIPSFAKGSHMEKGDVERLFQLLWTEQVLGE
RYEQNKQGFTNAYIKLGSQYQQVLNGKKKIFMTVGKMSQRKTNGGSGVGARTSRKSRQEE
TDEEEIDSDDDHDESFVQSTAKNGGFTTFKHRSRQNQQNRIDVADSDEEIDLTGGDTAIH
SNCLEDLMQLKMKLIRNGKPQPSDDTLETLSLTLPNSLKEIFNTEGIDDDNYDVGYLEVT
KKYNKTKPMSRKPSTYADTSSSAITPGSLASKFSYKVPDTSYNNSMTSSKSTTSKYNKSD
NRKSSGGSGGGIRAMVPGRR
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgcgcaacaatttggaggatttgagacgcagactggggcgtccagaggcgtca
tccacgccactgtcttcgtcgaaagtgcctatcaaaatcgacgacgacgagcccgtggcg
agcagcgggagcgggagcgtgagcagcaaaataaacaaggcgaacaagttcaagccagca
gcagttacatctcccgcaagttccggcgatcaccatccagttgcgtcgacatcgagggca
gtgcccgactcgcaacagaagcgtgcaccgtcttcgacgccagcgcaagagccatctaat
aagcgttcacgccaacaaacccaacaaatccagcactcccagccgtatctgcccaaagcc
tcgaatggaactatcacctacgctgacgactcggatgatcttataaatgatacctttaca
ggagatgtcctgaatggcttggacagtcaggagccgctgcccaaacccgtggagaagctg
gagaaacaagaggcgcctatgaggaaggtccggcagtataatacagacctcgattcgctc
gagatgcccgtaatacaaaacatgctttgcacaacgctaaagaagaaggacgcggttatg
caggagctgctgtcgttctatgaagatgatattgttgatggcactgtcgatcgcgattat
ctgcgcagtgagcagcagcgactgcaagaccgaattgaaagtctagagaatgcactcggc
cgagtgaagaaagtaaacggtgtaagcagtacggcagcgagtatgcatggaagctcacaa
agcaatgcaccttcaaagcaagtacggcaagaatggcaagtacggcaagaaagacaagaa
gaacaagagccggtggacgtagactcatcacccgtcgcaaccaagcgtccagcaatgtct
ctgcggagagagccccttggaagtgtaacaaacgaagatccaccagctttgagtaggtca
aaatcttctatcatgccctttgcagacaatatgatggacctcgatggcgtcgacctgcaa
agcccaatactgtcagacgaagatgtggcaacttccaaacatatgcaagttttgcggaat
gcaccgcagatacaagaatgtagcgatatacccgacgaagacgatgtcagtatcatggag
ccatctccaaagccaactaacccaccgccacctgctccgaaggcggaagattatcctaga
tatacatggtccagagacgtagagaaggttatgcatgatatgttcaaactgaatgcattc
cgtaaaaaccaacgagaggctatagatgcgacgcttgatggtagagacgtgttcgttctg
atgccaacgggtggtggtaagtctgtctgctaccaaatacctgcatgtgtcgatttagga
aaaacgcgtggtgtctcgataattgtatcaccgttattgtctcttattcaggaccaggtg
cagcacttggtctcaagagacattccgtcatacgcctactctggtgcgacagcgcttccc
gacaagagagccatccaggatgacttgcggcgacctaaaccagtaacgagactgctgtac
gtcacacctgaaatgcttggacagagtggcgctttcaaggatattcttcagcagctgcac
gccaagagccaacttgctaggtttgtcgtagacgaagctcactgtgtcagtcaatggggt
catgatttcaggccggactacacgaatctcggacaactgagagacgagttcccaggagtg
ccgtttatggctctcacagcgactgccaacgagcgcgttaagacagacatcaagagcagt
ctcaagatgaggggctgcgtcgagctgaaatcatccttcaaccgcaagaatctcttttac
gaaataaaaccgaagcacggaaagcaagtctacgctgatatacaaaaactcatcaacagt
aagttcaaaggacagacgggaatcatatattgctcgtccaaacgctcatgtgaagatgta
gcaagcaagctaaagcaagagtacggtttacctgctcaacactaccatgcaggactgagt
cgtgaagatcgcactaaaatacaattgaactggcaaaaaaataggtttttgatcatttgt
gcgactgttgcctttggtatgggtattgacaagccagatgtcagattcgtgattcacttt
tcactgcctcagtcattggagggttactatcaagagactggaagagctggaagagatggc
gaacacagtcattgtgtgctttactttgcgtacaaagatacgacgacaatcaactttctg
atcgacaacggcgacggtacacacgagcagaaggcaacacagagatcaaacctcagacaa
gtcgtacaattctgcctgaacaagacagactgcagaagaacacaagtgcttaactacttt
ggtgaacagtttgatccgaggaagtgccacaagacgtgtgataactgctttgaaggcgtt
ggtacagagaagcaagatgttacagaagagtccaagaatgcggtgtctttagtgaaggag
gtgtttaaagatggcgtgacgatgctgcactgcgttgatgcgttcaaaggatcaggcgct
gccagaatcagagacaaggggcacgacaagataccttcattcgccaaaggctcacacatg
gagaagggagatgtggagcggctttttcagcttctgtggactgagcaggtgcttggtgaa
cgctacgagcagaacaagcaaggcttcaccaatgcatacatcaagctcggctcgcagtac
cagcaagtgttgaatgggaaaaagaaaatcttcatgacagttgggaaaatgagccagcgc
aagacgaatggtggtagtggtgtcggagcaagaacgtcgaggaaatctcgccaagaggaa
actgatgaggaggagattgattcagacgatgaccacgacgagagcttcgtgcaaagcact
gcgaaaaatggaggattcacgacgttcaagcatcggtctagacagaaccagcagaatcgc
atcgatgttgctgactctgatgaagagattgacttgacgggtggggatacagctatccac
agtaattgcttggaggatctaatgcagttgaagatgaagcttatcagaaatggcaagcca
cagccgtcggatgatacgctcgagacactatcattgacgctgccaaattctttgaaagag
atattcaatactgaaggtattgatgatgacaattacgatgtggggtatcttgaggtcacg
aagaagtacaacaagacgaaaccaatgagtcgtaaaccatcgacgtatgcagacacgtca
tcgtcagctataacacctggatcacttgcatcaaaattctcatacaaagtgccagacacg
agctacaacaacagcatgacatcaagcaaaagcaccacgagcaaatataataagtcagac
aacaggaagtcatctggagggtctggcggtggaatcagagcaatggttccagggaggagg
tga
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integrated database retrieval system
