Wallemia ichthyophaga: J056_003593
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Entry
J056_003593 CDS
T03457
Name
(RefSeq) Pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
wic
Wallemia ichthyophaga
Pathway
wic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
J056_003593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
wic03041
]
J056_003593
Spliceosome [BR:
wic03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
J056_003593
Complex C
U5 SnRNP specific factors
J056_003593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
GIIM
Motif
Other DBs
NCBI-GeneID:
20376545
NCBI-ProteinID:
XP_009267084
UniProt:
R9AI76
LinkDB
All DBs
Position
Unknown
AA seq
2339 aa
AA seq
DB search
MSGPPPGFGPQTTAISNQDLSIKIKKHHQFSKRRWGLKKPGGAGTSGSEKVELPPEHLRK
IIKDHGDMSHMRYRNEKRIHLGALKYVPHAVLKLLENIPMPWEQVREVPVLYHITGAITF
VNQIPRVIEPVYHAQWASMWLAMRREKRDRRHFKRMRFPPFDDEEPPLDYSDNILDVEPL
EAIQLPLDEEEDAPIIDWFYDPKPLEDTVHVNGPSYKQWSLDLPQMANLHRIGKSILSET
HDRKNASHLFEDKAFFTSKALNMAIPGGPKFEPLFKDDLDDDEDWNEFNDINKVIIRQPI
RTEYKIAFPHLYNSRPRAVQIGPYHSPQSQYIRTDDPDMPAFYFDPSINPISSRAVAGAA
NTPQISHEDEIFGEDEEDEFELPQDMGAFLEDKPVHTERTSDAISLWWAPAPYNTRSGTM
RRAQDIPLIKDWYMEHCPPGMPVKVRVSYQKLLKVYVLNKLHQRPPKPQIKKRLVQSLKS
TKFFQQTTIDWVEAGLQVVRQGYNMLNLLIHRKNLNYLHLDYNMNLKPVKTLTTKERKKS
RFGNAFHLLREILRLTKLIVDVHVQFRLGLCDAFQLADGLQYSFAHVGQLTGMYRYKYKI
MRQIRMCKDLKHLIYYRFNTGPVGKGPGVGFWAPGWRVWLFFLRGIVPLLERWLGNLLAR
QFEGRNSRGVAKNVTKQRVESHYDLELRAAVMHDILDMMPESLKQNKAKTILQHLSEAWR
CWKANIPWKVPGMPTAIENIILRYVKNKADWWTSVAHYNRERIRRGATVDKAVVKKNLGR
LTRLYLKQEQERQHGYLKDGPYISSEEAVALYTSTVHWLESRKFSPIPFPPLSYKHDTKI
LVLALERLKEAYSVQGRLNQSQREELALIEQAYDNPHECLSRIKRLLLTQRAFKEAGIEF
FDTYDKLVPCYDIEPVEKITDAYLDQFLFFEADKRGLFPSWVKPADTEPPPLLTYKWAQG
INNLSDVWETSEGECVVMMETQLSRVYEKVDLTLLNRLLRLIMDHNLADYITAKNNTPLT
YKDMSHVNSYGLIRGLQFSAFVFQFYGLVLDLLILGLNRASEMAGPPQSPNSFLQYKDTA
TEVAHPVRLYSRYVDKIHILFKFDAEQSRDLIQRYLSANPDPTNSNIIGYNNKKCWPRDC
RMRLIKHDVNLGRAVFWNVKNSLPRSLTTIEWEDTFASVYSKDNPQLLFSMHGFELRILP
KIRAMNSEQYRLNDGVWNLTNEATKERTAQAYLRVSDDGINAFNNRIRQVLMSSGSTTFS
KIINKWNTTIIGLMTYYREAVLHTNELLDSLVKAENKVQTRVKIGLNSKMPSRFPPVVFY
SPKELGGLGMLSMGHVLIPQSDLRWSKQTDTGITHFRSGMTHEDDQLIPNLYRYIQPWEA
EFVDSARVWSEYAMKRKEAVSQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDWKQYQLLKHNPFWWTSQRHDGKLWQLNNYRVDVIAALGGVESILEHTLFKGTYFPT
WEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELEALQIETVQKETIHPR
KSYKMNSSCADILLFSAYKWNIARPSLLNDSKDVLDGTTSNKFWVDVQLRFGDFDSHDIE
RYTRAKFLDYTSDPSSMYPSPTGCMVGIDLAYNLYTSYGNWFPGLKPLMQQAMAKIMKAN
PALYVLRERIRKSLQLYSSEPTEPYLNSQNYSELFSNQTIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKLEKFGDLILRATQPQMVLF
SLYDDWLKEISSYTAFSRLILILRGLHVNNEKAKIILRPDKNTITEPHHIWPSLSAEDWI
KVESQLRDLIVNDFGKRNSVNTASLTQSEIRDIILGMEISAPSIQRQQMAEVENSAADAN
QITALQTKTTNVHGDEINVVTTTNYENQQFASKSDWRARAISSTNLPLRVQHVFVSNDDV
KDDSQAYTYVIPKNILRQFIISGDLRTQVAGFLYGVSPPDNPQIKEIKAIAWVPQRGSFN
NVELPSSLPEHEYLLNDLEPLGWIKTQSLELNHLSPQDVTTQARVMANNPAWGPSSICLV
CSFTPGSVSLSAYTLTVNGFEWGRKNQDLGGQPAGFSPNFSERTQLLLSDRILGMTLVPE
GGIWNYSLSLSQQWTPAMPYQISLARPTSFWADVHRPLQFANFSELSNNADADVENSLA
NT seq
7020 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtccaccaccaggatttggtccgcaaactacggccatatccaatcaggatcta
tctattaagattaagaagcatcatcaattctcaaagcgtcgctggggacttaagaaacct
ggtggcgcaggtacttctggcagtgagaaagttgaattgcctccagagcacttgcgtaaa
attattaaagatcacggtgatatgtcacatatgcgttatagaaacgagaagcgtattcac
ttgggtgccctcaagtacgttcctcacgctgtactcaaacttcttgaaaatatcccaatg
ccttgggagcaagtacgtgaagtgcctgtactctatcacattacaggcgctatcactttt
gttaatcaaattccacgtgttattgagcctgtctaccacgctcaatgggcttccatgtgg
ctcgctatgcgtagagaaaagcgtgacagaagacactttaagcgtatgagatttcctccc
ttcgatgatgaagaacctccactcgattacagcgacaacattctcgacgttgagcctctt
gaagccattcaacttcctctagacgaagaggaggatgctcctattattgattggttctac
gatccaaaaccactcgaagacacggtgcatgttaacggtccttcctacaaacaatggtcc
ctcgatttgccacaaatggctaaccttcacagaattggtaaatctatactctctgaaacg
catgaccgtaaaaatgccagtcacttgttcgaagataaggctttcttcacctcaaaagct
ctcaacatggccatcccaggtggtccaaaattcgagcctttgttcaaggatgatttggat
gatgacgaggattggaatgagtttaatgatattaacaaggttatcatccgtcagccaatt
cgcactgaatacaaaatcgctttcccacacctatacaactctcgtccaagagctgttcaa
attggtccataccactcccctcaatctcaatacatccgcacagatgaccctgatatgcct
gctttctattttgatccttccataaatcccatctcatcaagagctgtagctggtgcagcc
aacacaccacaaatcagccatgaggatgagatatttggcgaggatgaggaagatgaattt
gaattacctcaagatatgggtgcatttttggaagataaaccagtacatactgaacgtaca
tctgacgcaatcagcctttggtgggcgcctgctccatataatactcgctcaggtacaatg
cgcagagctcaggatataccgctcatcaaagactggtacatggaacactgcccacctggt
atgccagtcaaggtgagagtttcctaccaaaaactcttgaaagtttacgtcctcaacaaa
ctccatcaacgtccaccaaagccccaaattaagaaacggttagttcaaagtctcaaaagt
acaaaattctttcagcagacaactattgattgggttgaagctggtctccaggtcgttcgc
caaggttataacatgctcaatttgcttattcaccgcaaaaaccttaactacctccacttg
gattacaacatgaacttgaagcctgttaaaacgctcacaactaaggagcgtaagaagagt
agatttggtaacgctttccaccttttgcgtgaaattcttcgcttaacaaagttgatcgtc
gatgtgcacgttcaatttaggttaggattatgtgatgcgttccagctggccgatggtctc
caatattctttcgcacacgtcggtcaactcaccggtatgtatagatacaagtacaagatt
atgagacagatcagaatgtgcaaggatctcaaacatctaatttactaccgcttcaacact
ggcccagtaggaaaaggacctggtgtaggtttctgggcaccaggttggcgtgtgtggttg
tttttcttgagaggtattgttccacttctcgagaggtggctcggcaacttgcttgctaga
cagttcgagggtcgtaatagcaggggtgtagcgaagaatgtcaccaagcagcgtgtcgag
tcgcattatgatcttgaattgcgtgctgctgttatgcacgatatccttgatatgatgcct
gaatctctcaaacagaacaaggcaaagaccatccttcagcatctttctgaagcttggaga
tgctggaaggctaatattccttggaaagtacctggtatgcctaccgcgattgagaacatt
atcctccgttacgttaagaataaggctgattggtggacatccgtagctcactataaccgc
gagcgtattcgtcgcggtgctacagttgacaaagccgtcgttaagaagaatctcggtcgt
cttactagactctacctaaagcaagagcaagagagacagcacggttacctcaaagatggt
ccatacatctcatctgaagaagccgttgcgctgtacacctcgactgtccactggctcgaa
agcaggaaattttctccaattccattccctccattgtcgtacaagcacgacaccaagatt
ctcgttctcgctttggaaagacttaaggaagcatactctgtacaaggtcgtctcaatcaa
tcacaaagagaggaattggcactgatcgaacaagcctacgacaacccacacgagtgtctg
tctagaattaagagattgctgctgactcagcgtgcatttaaggaagccggtattgagttc
ttcgatacttatgacaagctcgttccttgttatgatattgaacctgtcgaaaagatcact
gatgcttacctcgatcaattcctcttcttcgaggctgacaagaggggtcttttcccttca
tgggtgaaaccagctgatactgagccacctccattactcacctacaagtgggctcaaggt
atcaataatctttctgacgtctgggagaccagtgaaggtgaatgcgtggttatgatggag
acgcagttgagcagggtctacgagaaagtcgacttgactctcctcaacagacttcttaga
ctaatcatggaccacaacttggctgactacattactgcaaaaaacaacactccacttact
tacaaagatatgtcccacgttaactcttatggtctgattagaggtcttcagttctccgca
ttcgtcttccaattctatggcttagtgcttgatctactcatccttggattaaatagagct
tccgagatggctggacctccacagtcgcccaacagcttccttcaatacaaggacacagcc
actgaggttgcgcaccctgtcagactctactctcgatacgtcgacaagatccacattctc
ttcaagtttgacgcagagcaatctagagatctcatccagaggtacctgtctgccaatcca
gatccaactaactcgaacattatcggctacaacaacaagaagtgctggccaagagactgt
cgtatgcgtctgattaaacacgacgtgaaccttggaagagcggtgttctggaatgtgaag
aactccctcccaaggtctttaactactattgagtgggaggatacgtttgcgagtgtgtac
tcgaaggacaatccacagctcctcttctctatgcatggcttcgagctgcgtatcctgccc
aagatcagagcgatgaatagcgagcaatacagactcaatgatggtgtatggaatcttacc
aacgaagctacgaaggagcgtacagcacaggcttatttgagggtatctgacgacggcatc
aatgcatttaacaatcgtatacgtcaagtgcttatgagttcaggatcgactaccttctcc
aagatcatcaacaaatggaacacgaccatcatcggtttgatgacatactaccgtgaggct
gttctgcatacgaatgaacttctcgactcgctcgtcaaggctgagaacaaggtacagacc
agagtcaaaattggtctcaattcaaagatgccttcacgttttccacctgtagtgttctac
tcgccaaaggagcttggcggtttaggtatgctttcgatgggtcacgtcctcattcctcag
tctgaccttaggtggtcgaagcaaactgatacgggtattacacacttcagatctggtatg
acgcatgaagatgaccagctcattccaaatctttacagatatatccagccatgggaagct
gagttcgtcgattctgctagggtctggtcggagtatgctatgaagcgtaaagaggcagtc
agtcagaataggagattgacacttgaagatctcgaagatagctgggatagaggtataccg
cggatcaacactctattccaaaaggatagacatacccttgcgtacgataagggatggaga
gtgcgtacagattggaagcagtaccagctactcaagcacaatccattctggtggacgtcg
cagcgccacgatggtaaattatggcagctgaacaactaccgtgtggacgttattgctgct
cttggtggtgttgaatctattctcgagcacacattgttcaagggaacttacttcccaacc
tgggaaggtctcttctgggagaaagctagtggattcgaagaatcgatgaaatacaaaaag
ctcacaaatgctcaaagatccggtttgaaccaaattccaaacagaagattcactctgtgg
tggtcacctacgattaatcgcgcgaatgtctacgttggtttccaagtccagcttgatctc
actggtattttcatgcacggtaaaatcccaacactcaagatctcacttattcaaatcttc
cgtgcgcacttgtggcagaagattcacgagtctgtcgtcatggatttgtgtcaggtcttt
gaccaggagttggaagcacttcagatcgagactgtccaaaaagagacaatccatccacgt
aaatcttacaagatgaactcttcatgtgctgacatccttctcttctcggcttacaagtgg
aatattgccagaccttcgctgctgaatgacagcaaggatgttttggatggtactacgtcg
aacaagttctgggttgatgttcagctcagatttggtgactttgactctcacgatattgag
agatacaccagagccaagttcttggattacaccagcgacccatcttccatgtacccatct
ccaactggttgcatggttggtattgacttggcctataacctgtacacctcgtacggtaat
tggttccctggtcttaagccacttatgcagcaagctatggccaagatcatgaaggctaac
ccagctctgtacgtcttgagagagcgtattagaaagtcgctccagctctactcctcggag
ccaaccgagccatacctcaactcacagaactactcggagctgttctccaaccaaactatc
tggttcgtcgatgatactaatgtctaccgtgtcactatacacaagacattcgaaggtaac
ctcaccactaagccaattaacggtgctatctttatcttcaacccaagaactggtcaactg
ttcctgaaaatcattcacacatctgtctgggctggtcagaagcgtctcggtcagcttgcc
aagtggaagacggccgaagaagttgctgctcttattcgctcacttcctgttgaagagcaa
cctaagcagattattgttactagaaagggtatgcttgatccattggaggttcaccttctc
gatttccctaacattgtgattaagggctctgaactgcagctaccattccaagcctgcctg
aagctggagaagtttggagaccttatcttgcgcgctactcagccccagatggtgctgttc
tcactctacgacgactggctgaaggagatctcgtcatacacggctttctcccgtctcatt
ttgatcctgcgtggattgcacgtcaacaatgaaaaggcaaagattatcctgcgtccagac
aagaacacaatcaccgagcctcaccacatctggccatcgctttcagcggaagactggatc
aaggtggagtcacagctcagagatcttatcgtcaacgactttggtaaacgtaactctgtc
aatactgcgtctctcactcagtctgaaatccgtgatatcattcttggtatggagatcagc
gcaccttctatccaacgtcaacagatggccgaagtcgaaaactcggctgctgacgcaaat
caaatcacagcactgcaaaccaagactactaacgttcatggtgatgagattaatgttgtc
acaactacgaactacgagaatcaacagtttgccagcaagtctgattggagagctagggct
atttcttcaaccaacttgccattaagagtgcagcacgttttcgtctcgaacgatgacgtc
aaggacgatagccaggcgtacacttatgtcattccaaagaatattctcaggcaatttatt
atcagcggtgatcttcgcacgcaggtggctggtttcttgtacggtgtctcgccacccgac
aatccacagatcaaagaaatcaaagcgatagcatgggtgccacagcgcggttcattcaac
aacgttgaactgcctagcagccttcctgagcacgagtacctcctcaatgatctcgagcct
cttggttggattaagacacaatctcttgagctcaaccacctcagtccgcaagatgtcaca
acgcaggcacgagtcatggcaaacaaccccgcttggggtccaagctctatttgtttggtc
tgctcgttcacaccaggcagtgttagcttgtctgcatacacgctcactgtgaatggcttc
gaatggggtcgcaagaaccaggacttaggtggacagccggctggcttcagtcctaacttc
tcagagcgcacacagctgctcctttctgaccgcattcttggtatgacgcttgtacctgag
ggcggcatttggaattattctctttcgctctcccagcaatggacaccggcgatgccctac
caaatctcgctagctagacctacctcgttctgggctgacgttcaccgtccgctccagttt
gctaatttctcagaactgagcaataacgcggacgcggatgtcgaaaacagcttggcttaa
DBGET
integrated database retrieval system
