Wallemia ichthyophaga: J056_003601
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Entry
J056_003601 CDS
T03457
Name
(RefSeq) DNA mismatch repair protein msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
wic
Wallemia ichthyophaga
Pathway
wic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
J056_003601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wic03400
]
J056_003601
DNA repair and recombination proteins [BR:
wic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
J056_003601
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Sec8_N
AAA_29
AAA_22
AAA_30
Flavodoxin_4
Lipase_GDSL
ABC_tran
Motif
Other DBs
NCBI-GeneID:
20376553
NCBI-ProteinID:
XP_009267092
UniProt:
R9AII3
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MPPKTPSSSQSMKQGSLFSAGFFKKTPTSSAPPSSSPMHPPSSTKRDAIKPSNSSPLAPQ
SAVQHKKAKAAPMSPLNESAHLNSDEDEENQQPKRAIKKRKPMVISSEEDEPEQPKQRLK
KRKESNDDDFIDDGPIEMDEDVDTTRNNLGVEDSDDLIEELDLDAFEKAKPAAKQAAKKP
LATTSKPVTETPKRQSSGENKSLLTKAERQAQQTKAAKKDSDSPFMFLHPPRDKYQNPIG
HPDYDPHTLYIPPKFWSEFSPFEKQFWEIKSDHFDTILFFQKGKFYELYENDAIIGHREF
DLKLTERVRMCMVGVPEMSFDLFAAKFLALGYKVGKVEQRETAIGMDMRNKADKKPAGAA
AKGSKSDDKLVRRELRSVLTNGTLVDPKMLADEAASHCVSIKENSNSLASNVPSFGLCIL
DASTGEFNLATFEDDKSRSKLETLIRQLRPKEIVHEKGNLDQLTLRVLRNITSISCLWTP
LNTGKEGMDAIETITELKTLFKKGVEDIERVKLPDAVESIVENTEAIESLGNLMWYLRSL
NLDRDLLSLGNFNIYDATREGQAMILDGRTLAHIEVLVNSEGNEDDTLLKLLNRCVTPFG
KRLFRIWLCTPLRSSKAINERLNAVDDIISNPGFTYEFDSNVKGLPDLERLLSRIHAMSV
RPKQFIQVLGAFNKIQQVFEKLEDEAKEFDSQSLRATLKSIPDLRDYISNIESKFDLTEG
ETLMPCDGADEAYEEAKKLNEELEEELDEILNKYRREYKTKGINYKDVGTKEIYSIEMPK
KTSVPANWTKMSSTQKVDRYWSPEVRQLVQKVKEARETRTTALDDFAKKLYVAFDADYKT
WIAAVKACAEIDCINSLAKSSINMEEPRCRPNIIESNEAVLEFEQLRHPSMALRRDFVAN
DVRLGGKDEGTMLLTGPNMAGKSTLLRMTAAAVIMAQIGCYVPAESATIAPVDRIASRLG
AYDNMFSNSSTFMVELAETSKIINETTPKSLLILDELGRGTSTTQGIAIASAVLQHIASF
LGCCLFSTHYSSLGDFGSTHPNIKSCHMASEVNSEKREIRFLYKLVNGVALDSYGHHVAK
LAGVPLPVVVRAEQVATEYTEANKLEQQKAEANRHKTMPLASQSDFATAIRLAKAAKGLT
FKDRRNLKFISEANSQ
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaaaacgccatcgagctcgcagtctatgaagcagggcagcctgttctccgct
gggttctttaagaagactcccacttcctctgcgccgccatcttcatcgccaatgcatcca
ccgtcctcaacaaagagagatgccatcaaaccaagtaactcctcccctcttgcgcctcag
tcagccgttcaacacaagaaagcaaaagcagctccaatgtcccctttgaacgagagcgcg
catttaaatagtgatgaagatgaggagaaccagcagccaaagcgtgcaataaagaagcgt
aagccgatggtgatctcatctgaagaagacgagccagaacagcccaaacaaaggctcaag
aagagaaaggaaagcaacgacgacgatttcattgatgatggccctatcgaaatggatgag
gatgtcgacaccacgcgtaataacctgggtgttgaagactctgacgacttgatcgaggag
ctggacttagacgctttcgagaaggcaaagccagccgcaaagcaagctgcaaagaaaccg
ctagctactacatccaagcctgtcacagagacacctaaacgtcaaagttctggtgaaaac
aaatcactcctgacgaaagctgaacgtcaagcacaacagactaaggctgcaaagaaggat
tcagactctccattcatgttcttacaccctccacgcgacaaataccaaaacccaattggc
catccagactacgatcctcacactctttacatcccgccaaaattctggagcgagttttct
ccatttgaaaagcagttttgggaaatcaagtctgaccactttgacacaatcctcttcttc
cagaaaggcaagttctacgagctctacgagaacgatgcgatcattggacaccgcgaattc
gatctcaagctgactgaacgcgtgagaatgtgcatggtcggtgtaccggagatgtcgttt
gatttattcgcggccaagttcctagcactaggttataaagttggaaaggtagagcaacgc
gagactgcaattggcatggatatgcgcaacaaggcagataaaaagccagcaggagcggca
gcaaagggatctaaatctgatgataagcttgtgcgtcgtgaattacgctctgtgttgaca
aatggtactcttgtggatccgaaaatgcttgcagacgaagcagcttcacattgtgtatca
atcaaagagaatagtaacagtctggcaagtaacgtaccttcctttggactatgcattctt
gacgctagtactggtgaattcaacctcgctactttcgaagatgacaagtcgagatcaaaa
ttagagaccctgattagacagctgcgtcccaaggaaattgttcatgagaaaggtaatctg
gatcagctcactttgcgtgtactgaggaacattacgtcaatttcatgcctatggacaccc
ctcaacacagggaaagaaggaatggatgcaattgaaactataacagagcttaaaacgcta
ttcaaaaagggtgtcgaggatattgaaagagtcaagctgccagatgcagtggaaagtatc
gtcgagaataccgaagccatcgaatcgttaggaaacctgatgtggtatcttcgatcactc
aaccttgatcgtgatttgctgtctcttgggaatttcaacatatatgatgccacacgtgaa
ggtcaagctatgatcttagacggtagaacgctggcacatatagaagttctcgtcaatagt
gaaggtaacgaggacgacactctacttaagctgctcaacagatgtgttactccatttggt
aaacgtcttttcaggatatggttgtgtactcctctgcgctcgtcaaaggcgattaacgag
cgtttaaacgccgttgacgatattatatccaatccaggttttacatatgaatttgacagt
aacgtcaaaggattaccagatctcgaaagactactgtccagaatccatgctatgtcagtg
agacctaagcagtttatacaagtgctaggtgcattcaacaagattcaacaagtcttcgaa
aagctagaagatgaagcaaaggaattcgattcgcaatctctccgagcaacgctgaaatcc
atacccgatttgagagattatatatcaaatattgaatccaagttcgatttgactgagggt
gagacgctgatgccatgcgatggtgcagatgaagcttacgaggaggcgaagaagctaaac
gaagagctagaggaagagctcgacgagatacttaacaagtacagacgtgaatacaagacg
aagggcataaactacaaagatgtgggaacgaaagagatatactcgattgagatgccaaaa
aagacatcggtgcctgccaattggacgaagatgtcctcgacgcagaaggtagacagatac
tggtcaccagaagttcgtcagctcgtacagaaagtaaaggaagcgcgtgaaacacgcaca
actgctctggacgactttgctaagaagctctatgtcgctttcgatgctgattacaagaca
tggattgcagcagtcaaggcgtgtgctgagattgattgcatcaactcgctagccaaatct
tcaattaacatggaagagcccagatgcagaccgaatatcattgagtctaatgaagctgta
ttggaatttgaacagctccgccatccgtctatggcattgaggagggacttcgtggcaaat
gatgtcagattgggtggtaaggatgagggaactatgctgttgactggtcctaacatggcg
ggtaaatccactcttcttcgtatgactgctgctgcagttattatggcgcagattggctgt
tacgtgcctgctgaaagcgccactattgcccctgttgatagaattgctagtagacttggt
gcctatgacaacatgtttagtaactcgtcgacatttatggtcgaattggcggaaacctcg
aagataatcaacgagactacgccgaagagcttgcttattttagatgagctgggaaggggt
acttctacgactcaaggtattgccattgctagtgcggtactacagcacatcgcctcattc
ttgggatgctgtcttttctccacccactactcaagtcttggcgactttggatcgactcac
ccaaatatcaaatcatgccacatggcttccgaggtgaatagtgaaaagagggaaattaga
ttcctttacaagctcgtaaatggggtagcgctggacagctatggacatcatgttgccaaa
ttggccggtgtgccactgcctgtagtcgtacgggccgagcaggttgcaacagagtacacg
gaagcgaacaagctcgaacagcagaaagcagaagctaacagacacaagacaatgccactg
gcctctcaatcagactttgcaacagcgattagactcgccaaagcagcaaaggggttgacg
tttaaagacagacgaaatctcaaattcataagcgaagccaacagtcagtga
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