Wallemia ichthyophaga: J056_003902
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Entry
J056_003902 CDS
T03457
Name
(RefSeq) Replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
wic
Wallemia ichthyophaga
Pathway
wic03030
DNA replication
wic03410
Base excision repair
wic03420
Nucleotide excision repair
wic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J056_003902
03410 Base excision repair
J056_003902
03420 Nucleotide excision repair
J056_003902
03430 Mismatch repair
J056_003902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wic03032
]
J056_003902
03036 Chromosome and associated proteins [BR:
wic03036
]
J056_003902
03400 DNA repair and recombination proteins [BR:
wic03400
]
J056_003902
DNA replication proteins [BR:
wic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
J056_003902
DNA Replication Termination Factors
ELG1-RFC complex
J056_003902
Chromosome and associated proteins [BR:
wic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
J056_003902
DNA repair and recombination proteins [BR:
wic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
J056_003902
Check point factors
HRAD17(Rad24)-RFC complex
J056_003902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
Rad17
AAA_22
RCF1-5-like_lid
AAA_11
AAA_16
AAA_24
AAA_assoc_2
AAA_30
RuvB_N
AAA_14
DEAD
Mg_chelatase
AAA_19
AAA_5
SLFN-g3_helicase
ResIII
AAA_2
AAA_7
AAA_28
DUF815
nSTAND3
AAA_23
AAA_3
Viral_helicase1
AAA_18
Cdc6_lid
RNA_helicase
bpMoxR
AAA_25
DUF2247
SgrA_ig-like
Motif
Other DBs
NCBI-GeneID:
20376854
NCBI-ProteinID:
XP_009267386
UniProt:
R9ANG9
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MPANESLKPWIEKYRPRTINDVAAQDHTIRVLNKQLNNANLPHMLFYGPPGTGKTSTILA
LSRQLFGQDLVNSRVLELNASDERGISVVRDKIKNFAKQAPKASSSSNTPSYKIIILDEA
DSMTQDAQSALRRTMETYSKSTRFCLVCNYVTRIIEPVASRCSKFRFKPLDDTDTKARLE
FIAKEEHIDYEDGVIDALISTTHGDLRQAITYLQSATRLHQATSTKIIPDTITEIAGTIP
QHIIDNIVSVCSNKKNFKEVQSTLKQIHLNGYASAQILAQLHDKVIDSSSIADSSKAKSV
LAIAEADKALTDGADDELQMLNLAMKLQKAFNRVN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgccagccaacgaatcattgaaaccttggatagagaaatatagaccacgcactatcaat
gacgtagctgcacaggatcatacaatacgagttcttaacaaacaactcaacaacgctaat
ttaccacatatgttattctatggtccacctggtactggtaaaacatccactattctcgct
ttatccaggcaattatttggccaggatctcgtaaatagtcgcgtactcgagttaaacgcg
tctgatgagcgtggtattagcgttgttcgcgataaaattaaaaactttgcaaaacaagca
ccaaaggcttcttcttcatccaatactccttcttacaagattattatactcgatgaagct
gattctatgactcaagatgctcaatctgctttgaggcgtacaatggaaacttattccaag
tcgactagattctgcttagtctgtaattacgttactagaatcatcgaacctgtcgcttct
cgttgttcaaaattccgctttaagccacttgacgatactgataccaaagctagactcgaa
tttatcgctaaagaggagcatattgattatgaggatggtgtaattgatgcactcataagc
acaacccatggcgacctcagacaggctatcacataccttcaatcagctacacgcttacat
caagcaacatcgacaaaaataattccagatacgattactgaaattgccggtactatacct
caacacataattgataacatagtgtctgtttgttcgaacaaaaagaattttaaggaggta
cagagcacactcaagcaaatccatttgaatggttatgcttcagctcagatacttgcacag
ctccatgacaaagttatagacagttctagtatagctgactcctcaaaagctaaatcagtg
ttagccatcgcagaagcagacaaagcgctaaccgatggagcagatgatgagcttcaaatg
ctcaacctcgcaatgaaactgcaaaaagcatttaaccgtgtcaactga
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