Wallemia ichthyophaga: J056_003942 Help Entry J056_003942       CDS       T03457                                  Name (RefSeq) Polyadenylation factor subunit 2   KO K15542   polyadenylation factor subunit 2 Organism wic  Wallemia ichthyophaga Pathway wic03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:wic00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     J056_003942  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:wic03019]     J056_003942 Messenger RNA biogenesis [BR:wic03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage and polyadenylation specificity factor (CPSF) complex      J056_003942 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_IFT122_1st eIF2A PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_RIG_1st Beta-prop_Vps41 PROPPIN Motif Other DBs NCBI-GeneID:  20376894 NCBI-ProteinID:  XP_009267426 UniProt:  R9ANL6 LinkDB All DBs Position Unknown AA seq 460 aa AA seqDB search MVDKESNALGAVYQLGIDSRKPKKTIERRTVEYAGELAAWNRDRRNITSPRPNQFLRPGL DHIVELRPPEAYSNPTTSIAAKFVQASVNKIKCSINVVAWTPDGRRLLTGCHSGEFVLWN GLTFNFETILQAHDSSIRALAYTYSGDWIISADSAGTVKYFNPAMNNVAAWQAHGNKDTG MDTAIRGVAVSPTDQHFVTASDDQTLKVWAFGEHREERTLTGHGWDVKCVDWHPHKGLIM SGGKDNLVKFWDPRRPSDLSTLHGHKNTVQTCRFSPDGLLAATGSRDQSVRVFDLRAMKD LTVLKGFDREVCSLAWHPIHPVLVTGTATGAMVYHSLAHPHDPKSTTNPIASVDWAHESS VWSMAWHPLGHLMASGSNDYTTRFWERERPGRAVGRDKFHHGPMSEEEEKALLQGPSISP QTNKSEDEDMPLPGLGNTNTGINSIYAVGPIEGPLPGFDG NT seq 1383 nt NT seq  +upstreamnt  +downstreamnt atggtcgataaagaatctaacgctctcggcgctgtttatcaactcggtatcgactcacgc aagccaaagaagacgattgagaggaggactgtcgaatacgcgggtgaattagctgcctgg aatagagatcgtaggaatatcacaagtcctcgtccaaatcaattccttagacctggtttg gatcatattgttgagctgcgcccccctgaagcttacagcaatccaactacttcgattgct gcaaaattcgttcaagcatccgtcaataagatcaagtgctctatcaatgttgtagcttgg accccagatggtcgtcgtctactcactggctgtcactctggtgaattcgtcttgtggaat ggcttaactttcaactttgagactatcttacaagctcacgactcctccattagagccctc gcatacacttactctggcgactggatcatttccgctgattctgccggtactgtcaaatat ttcaaccccgccatgaacaatgttgctgcttggcaggcacatggcaacaaagataccggt atggacactgccatacgtggtgtagcagtctctcccactgaccagcactttgttaccgca tccgacgaccagacgcttaaagtttgggcatttggtgagcatcgtgaagagcgtaccctc acaggccacggttgggacgtaaaatgtgttgattggcatcctcacaaaggtcttataatg agcggcggtaaagacaatctcgtcaaattctgggatccaagacggccgtctgatctatct accttgcacggacacaagaacacagtacaaacgtgtagattctctcctgatggtttgcta gctgccactggatcacgtgatcaaagcgtcagagtttttgatctacgcgcaatgaaggat cttacagttttgaaaggtttcgatagggaggtatgctcactggcttggcatcctattcat ccggtgcttgtcacgggtacggcgacaggcgctatggtttaccattccctcgctcaccct cacgacccaaagagtacaacaaaccctatagcgagtgtcgactgggcccacgagagtagt gtgtggtcaatggcttggcatcccctcggtcacctcatggcgtcaggctctaacgactat actacacgcttctgggagcgcgagagaccgggaagagccgttgggagggataagttccat cacggtcctatgtcagaggaggaagagaaggctttacttcaaggtccttccatctcccca caaaccaacaagtcggaggacgaggacatgcccttacctggactcgggaacacaaacact ggcatcaacagtatttatgctgtcggtccaattgaaggccctctgcctggcttcgacggg tag

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