Wallemia ichthyophaga: J056_004181
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Entry
J056_004181 CDS
T03457
Name
(RefSeq) ATP-dependent RNA helicase dbp4
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
wic
Wallemia ichthyophaga
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
wic03009
]
J056_004181
Enzymes [BR:
wic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J056_004181
Ribosome biogenesis [BR:
wic03009
]
Eukaryotic type
90S particles
Helicases
J056_004181
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
20377133
NCBI-ProteinID:
XP_009267657
UniProt:
R9AGY9
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MKSKQQTKPYKRINQKRVADDNNLRDMHALQKELSEKTELFDELPISQQTKKGMKRNGFV
KMTEIQAATTHLALKGKDLVGSARTGSGKTLSYLLPMLELLYKEKWSSTDGLGALVVAPT
RELALQIFKVLHAIGTNHTFSAGLLIGGKNVAQEKTRLNKMNILIATPGRLLQHMDETYG
FSADNLKMLILDEADRILDLGFAKTVHAIIDQLPPTHTRQNLLFSATISASVASLAKMSL
NDPAYVELKNTDNGEDPTPKNLAQFYSLVPLHRKLDVLFGFVKSHKQNKVLVFASSCKQV
RHIYETFSHLRPGISLMQLHGKLKQAKRHATLAQFSRASHAVLFATDIAARGLDIPAVDW
VVQLDAPEDADTYIHRVGRTARYNSKGCALMLVEPAEKALLKRLEEKHITPKGTKIKEKL
MQPIGNALQAHAFQDTEIKYLAQKAFVSYVRSLHLMKDKEVFDVTRYPLSEYAGSLGLPG
VPKVKFMAAEKARARAEDKKEVSESEQEQEQNQESGDDSEDTDLAKQTQKESQSKPGVRT
KYDKLFERKNQGQLSEHYNALVDRNREGEGESDEELMTITRRDHELESGGSDGEEDDAAG
NLSKRKLRAGQSKKAIAGKSEPGHKLRFDEDGQAHELYELQKGEDVDVDNEKKRFIDEQN
KQLKLADVENKRVAKEKRDEKKRKRKDREVEGDDSDDAAEAVIGDGEDDGYVSPEFDLGD
EDEIEGESGSDGESNDKESSQKKQKKESETRDIDDDEEYALSLLRN
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaagcagcagacaaaaccctacaagcgcataaatcagaagcgtgtggcagat
gataataatctcagggatatgcacgctctccagaaggagctgagcgagaagactgagctg
ttcgacgagctgcctatctcccagcagaccaagaaggggatgaagcgcaatggattcgtt
aagatgacggaaatccaagcagcgacaacgcatttggcgctcaaaggcaaggatctcgtc
ggttcagcgcgcaccggcagtggtaagacgctcagctatctcctgccgatgctcgagctg
ttgtacaaggaaaagtggtcgagcactgatggactaggtgctctcgtcgtagccccaacg
cgtgagcttgcgctgcaaatattcaaggttctccacgctataggcaccaatcacactttc
tctgctggtctgctcattggagggaagaacgttgcgcaggagaagacgcgactgaataag
atgaacattctcatcgccacccctggtcgtctcctacaacatatggacgaaacttacggt
tttagcgccgataacctcaagatgctgatcctagatgaagctgatcgtatacttgatttg
ggattcgctaagacggttcacgcgatcattgaccagctaccaccaacgcatacgcgtcag
aatttgctattctcggctactatatccgcatcagtcgcctcacttgccaagatgagtctc
aatgatccagcttatgtcgagctgaaaaacacggataatggggaagatccgacaccaaag
aatttggcgcaattctattcactcgttcctctccaccgcaaactggatgttttattcggg
ttcgtgaagagtcacaaacagaacaaagtgctcgtattcgctagctcatgtaagcaagta
cgacacatatatgagacgttctcgcacctgcgtcctggtataagtttgatgcagctgcac
ggtaaattgaagcaagcgaaacggcacgcgactcttgcgcagttcagtcgagcttcgcat
gcggtgttgtttgcgacggatatcgcagcgcgtgggttggacatacctgcagtggactgg
gtggtacaactcgatgcgcctgaagatgcagacacttatatacaccgtgtcggacgcaca
gcacgttacaacagcaagggatgtgcgctgatgctagtcgagcctgctgagaaagcattg
ttaaagagactcgaagaaaaacacattacgccaaaaggaactaagattaaggagaaactt
atgcaacctattgggaatgcgttacaagcacatgctttccaagatactgaaatcaaatac
ctcgctcagaaggctttcgttagctatgtccgctcactgcatctcatgaaggataaagag
gtctttgatgttacgcgctacccactcagcgaatacgcgggtagtctcggtctgcctggt
gtgcccaaggttaagttcatggcggcggagaaagcaagagcgagagcggaggataagaag
gaggtgagtgagagtgagcaagagcaggagcagaatcaggaaagtggagatgatagtgag
gatactgatttagcgaaacaaacgcaaaaggaatcacaaagtaaacctggggtgcgcacc
aagtatgacaaacttttcgagcgtaagaaccaaggacagctatcggagcactacaatgca
cttgtagacaggaatagagagggagagggagagtcggatgaggagctgatgacaatcact
cgtcgcgatcacgagctggagagcggtggtagcgatggagaggaagatgacgctgcgggt
aacctctcaaaacggaaacttagagcgggtcagtcgaagaaggcgatcgcagggaagagc
gagcctggtcataaattgcgcttcgacgaggacggacaagcgcatgaactgtacgaatta
cagaaaggggaagatgtcgacgtcgataatgagaagaagcggtttatcgatgaacaaaat
aaacagctcaaattggctgacgttgagaataagagagttgcaaaggagaaacgtgatgaa
aagaagcgtaagaggaaggatagggaggttgagggcgacgacagcgatgatgcagctgaa
gctgttattggagatggcgaggatgatggttatgtgtcaccggagttcgatttgggtgat
gaggatgagattgagggtgagagtggtagtgatggtgaaagcaacgacaaagaatcgagc
cagaagaagcagaagaaggaaagtgagacacgagatatagatgacgatgaggagtacgct
ttgtcattgctaagaaattag
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