Wallemia ichthyophaga: J056_004310
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Entry
J056_004310 CDS
T03457
Name
(RefSeq) Transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
wic
Wallemia ichthyophaga
Pathway
wic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J056_004310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wic03021
]
J056_004310
Transcription machinery [BR:
wic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
J056_004310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
COA8
Motif
Other DBs
NCBI-GeneID:
20377262
NCBI-ProteinID:
XP_009267786
UniProt:
R9AH22
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MSKPYTDYKLISNNSNGFKYNVMKLNSNKQVDLSTLPQPLKLNRKDPNHLLTPVPKRDES
GKIELDDNHNPILIDPITKQDIPPIQQPSKHFKKKTKQVFMADESTIELRKSERLPWIME
SGDSIWQGQLDGKPQDQSYVMLIFNKNHDFKVEPTNKIYKFNPQPNYNTLSIDEADQIYS
KGVDNPWFMRNKASNDGGSVNDGAVDNNNPSTSHQRLQSILNHAPDSSKPSTQKRMQVDR
GEVKDETVDALFDEMEFDEEFQDDDEHVIQDNQDDDQLKELEDKIKKEMHQANIGHVEQT
SNLDDVEEDIKPFQKSHTEKEMKRFLRRHDKSNAEAYDSDNSDDDQEEEEQRKKEQEEQE
KRQLDAQENDKATSLTKSIKKEHTPASLAAQQVARRATSPYNKQRSSSPSSKRSRTDIDD
RHDSKKIKVKRESMSPSASPSTPPSSADLQLLQEDEIIAFLRGKSLTTSDLIQHFKKRFK
AQPRNREVIGSVLKKVASRTNDGKLQLKEGL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaccctatacagattacaagctaatatcgaataattcaaatggattcaaatac
aacgttatgaaattgaatagcaataagcaagtggatctgtcaaccctcccacagccactc
aagcttaacagaaaagatccaaatcatttactcactccagttccaaagagggacgaatct
ggtaaaatagagttggatgacaatcataatcccattctaatcgatccaataacaaagcaa
gatattccacctatacagcaaccttccaagcactttaagaagaagacaaagcaggttttc
atggcagatgaatccaccattgagttgagaaagtcggagagattgccttggattatggaa
tctggcgactctatctggcaaggtcagttggatggaaaaccacaggatcagtcttacgtg
atgctcattttcaataaaaatcatgatttcaaggttgagccgactaataaaatctacaaa
ttcaatccacaaccaaattataacacgctatcaattgatgaggctgatcagatatatagt
aaaggtgttgataatccttggtttatgagaaataaagctagtaatgacggtggtagtgtt
aatgacggtgctgttgataataacaatccatctacctcccatcaacgtctacaatctatt
cttaatcacgccccagactcctcaaaaccctccactcaaaaacgcatgcaagtcgataga
ggtgaagttaaagatgagaccgtagacgccctattcgatgaaatggagtttgacgaagaa
ttccaagatgacgacgaacacgtcattcaagataaccaagatgacgaccagcttaaagaa
ctcgaagataagattaagaaggagatgcaccaggctaacattggtcacgtcgaacaaact
agcaatctcgatgatgttgaagaagatattaagccgttccagaaatcccacacggagaag
gaaatgaagaggtttttgcgtcgacatgacaagtctaacgcagaggcttacgattctgac
aatagtgatgacgaccaagaagaagaagagcaacgcaagaaggagcaagaagagcaggag
aaacgtcagctcgacgcacaagaaaacgacaaggcaacatcgctgacaaaatcaataaag
aaagaacacacacctgcatcacttgcagcccaacaagttgcacgcagggccacatcacca
tacaacaaacaacgctcttcttcaccttcctccaaacgtagtagaacggatatcgacgat
cggcacgacagtaagaagattaaagtcaagagggagagtatgtcaccatcagcctcccct
tccacaccacccagctcggcagatctgcagctattgcaagaggatgaaattatcgcgttc
cttagaggaaagtctctcactactagcgaccttatccagcatttcaaaaagagatttaaa
gctcagcctaggaatagagaagttattggtagtgtacttaaaaaggtcgctagcagaact
aacgatggcaagctccagctcaaggagggtctttag
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