Wallemia ichthyophaga: J056_004552
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Entry
J056_004552 CDS
T03457
Name
(RefSeq) RNA polymerase II-associated protein 1-like protein
KO
K15174
RNA polymerase II-associated factor 1
Organism
wic
Wallemia ichthyophaga
Pathway
wic04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
J056_004552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wic03021
]
J056_004552
Transcription machinery [BR:
wic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
J056_004552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Paf1
NinG
Motif
Other DBs
NCBI-GeneID:
20377504
NCBI-ProteinID:
XP_009268022
UniProt:
R9AMA6
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MSKSKYDLIVRTRYQNQIPAPKFGPKLINIEPNLQRLGDYNFTADLVAEQPHAMLADAES
GMPLQLQHFAELWDDHDEDDEHIHLNPEADVELDDDDLALLVDPADVSLRGNTTLNSGTT
TPDKPSQASNKAWLYKSKYSNLNASEVNEKRTNYSKAALSRKQSSDVRVYDDTPEGRAQE
IESTFQWDTRQPSSQELSEITHPQKKHLKAVDTYDFLPDFETFANDYFLMRFADDPSDRT
TSSDHRLHNGILRPRYADNGETWLQYYLPESDEQYALLRSKFEAETLPEDVDEQQRVIFN
YIREYNVTNEQKDTNDILLMFDNGDSKPPGSTVINPSLASARPRGKGVYYKHMPTRMTLK
KRRPKDEEDEDMWDKIQLGLEPLNEEEVSERMAIDDYFMPAGPQRAKEKKEEQRQMEDAA
KEEEKLRIKSEKIQHKQDLEKERKAAMEEQIRREEEDKIGVNASKSDESEDEEFGDKEEE
DEDKDGDESKGNNNSKEKEVPRSSPPGSDDGEHDNVTSEAASKEIDEAIRREIDQRQTGN
DNRDVNMRSASPPTDGDKPESKGSGQPEDAQEAQEAQETSASSAPPATNTETSPGGEKAE
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatctaaatatgatttaatcgttagaactagatatcagaatcagattcctgca
cctaaatttggtcctaaattgatcaatatcgaaccaaatttacaaagactgggtgactac
aacttcacagcggatttggtcgcggagcagccacatgcaatgctcgccgatgctgaatct
ggtatgcccctacagctacaacactttgctgagttatgggatgatcacgatgaggatgac
gagcatattcatctcaatccagaagctgacgtcgaattggatgacgatgacttggcctta
ttggttgatcctgccgatgtttctctgcgtggtaataccactcttaattctggcactacc
acaccagataaaccctctcaagcttcaaataaggcgtggttgtataaatccaaatactca
aacttaaacgcttcagaagttaatgaaaagcgtaccaactactctaaagctgctctctca
cgaaagcaatcttctgacgttagagtatacgatgatactcccgaaggccgagcacaagag
attgagtcaactttccagtgggacacacgtcaaccatcgtcacaagagttgtctgaaatc
acacaccctcaaaagaaacatctcaaagctgttgatacctacgactttttacctgacttt
gaaacctttgccaacgattatttccttatgcgatttgctgatgatccttctgatcgtaca
acatcctctgatcatcgtttacacaatggtatactaagaccaagatacgcagataatggt
gaaacttggttgcagtactatttgcctgaaagtgatgaacagtatgcacttctcagatct
aaatttgaagcagaaaccttacctgaagatgtcgatgaacagcaaagagttatattcaat
tatattagagaatacaatgtcacgaatgagcagaaagataccaatgatatacttctcatg
tttgataatggtgacagtaaaccacctggatctacagtaatcaatccctcacttgcatct
gccagaccgcgtggaaagggtgtttattacaagcatatgccgacgagaatgacattgaag
aagcgtagacctaaggatgaagaagatgaagacatgtgggacaagattcaactcggatta
gaacctctcaacgaagaagaggttagtgaaaggatggcaattgacgattactttatgcca
gctggaccacaaagagccaaagagaagaaggaggaacagaggcagatggaagatgcagcc
aaggaggaggagaagctgcgcataaaatctgagaaaatacagcacaagcaggatctcgaa
aaggagcgcaaggcagcaatggaagagcagataaggagggaggaggaagataagattgga
gttaatgcttccaagtctgacgaaagcgaggatgaagaatttggtgataaagaagaggaa
gatgaggataaggatggtgatgagagcaaaggtaacaataacagcaaagagaaggaagtg
cctcggtcgtctcctcctggaagtgacgatggcgagcacgataatgtgactagtgaggcg
gctagtaaggagatagatgaggcaattaggagagagatagatcagaggcaaacaggtaat
gataacagagatgtaaatatgaggtccgcttcaccgccgacagatggagataagccggaa
tcaaagggtagtgggcagcctgaagacgctcaagaggctcaagaagctcaagaaacatct
gcatcgtctgcacccccagccactaacaccgagacatctcccggcggtgaaaaagccgag
tga
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