Wallemia ichthyophaga: J056_004560
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Entry
J056_004560 CDS
T03457
Name
(RefSeq) Replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
wic
Wallemia ichthyophaga
Pathway
wic03030
DNA replication
wic03410
Base excision repair
wic03420
Nucleotide excision repair
wic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J056_004560
03410 Base excision repair
J056_004560
03420 Nucleotide excision repair
J056_004560
03430 Mismatch repair
J056_004560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wic03032
]
J056_004560
03036 Chromosome and associated proteins [BR:
wic03036
]
J056_004560
03400 DNA repair and recombination proteins [BR:
wic03400
]
J056_004560
DNA replication proteins [BR:
wic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
J056_004560
DNA Replication Termination Factors
ELG1-RFC complex
J056_004560
Chromosome and associated proteins [BR:
wic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
J056_004560
DNA repair and recombination proteins [BR:
wic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
J056_004560
Check point factors
HRAD17(Rad24)-RFC complex
J056_004560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_lid_RFC1
ResIII
AAA_11
RuvB_N
AAA_22
AAA_30
DEAD
nSTAND_NTPase5
DUF815
AAA_5
RCF1-5-like_lid
AAA_7
AAA_16
TIP49
AAA_19
Viral_helicase1
AAA_24
AAA_3
SLFN-g3_helicase
AAA_28
bpMoxR
nSTAND3
ATPase_2
Bac_DnaA
RNA_helicase
TniB
DNAX_ATPase_lid
Mg_chelatase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
20377512
NCBI-ProteinID:
XP_009268030
UniProt:
R9AGA0
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MFYTKKIEDNEMSKMEVDNNLNNDLPWVEKYRPNQLSDVVSHTDIIQTISNFIDKERLPH
LLFYGPPGTGKTSTILAIARKIYGTNYKRNVLELNASDDRGIDVVRDQIKSFAQTRTLFS
NGFKLIILDEADLMTQQAQGALRRIIEHYTPTTRFCIICNYVNKITPAILSRCTRFRFSP
LPKQHLHARLTEVVDREAVEIDEDAKDALLNLTRGDMRRALNVLQACHTACAPEKITADD
VFNVTASPPPSTIEYLIKSMMNDDISTCYQRVHTLKRQNGLALQDIITGAYEYIQQIEFP
RATRLHLLENLAEIEYRLSTGSSETIQLSALIASFKLGIDIAAKET
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgttctatactaagaagatagaagataacgaaatgagcaaaatggaggttgataataat
ttaaacaacgatttgccttgggttgagaagtacaggccgaatcagttatctgacgttgtc
agccatacggatataatacaaacgatttcaaatttcattgataaagagcgcttgccgcat
cttttgttctacggtccaccgggaactggtaagacttctactatcctcgcaattgccaga
aaaatctacggcacaaactataaaagaaacgtcttggagttgaatgcttccgatgacaga
ggtattgatgtcgtacgcgaccagatcaaatcgtttgctcagacgcgcactctgttttca
aatggcttcaagcttattatactcgatgaggctgatcttatgacacagcaagcacagggt
gctcttaggagaataatcgagcattatacaccaacaacgcggttctgtataatctgcaac
tacgtaaacaagattactcctgccattctatcgaggtgcactagattcagattttcacct
ctccctaaacagcatttacatgcccgcttaactgaggttgttgatagagaggcagttgaa
attgacgaagatgcaaaagatgctttgctgaatctcactagaggtgatatgaggcgtgct
ttgaacgtccttcaagcgtgtcatactgcttgtgcgccagagaagattacagcggatgac
gtatttaatgttacagcatcaccgccaccatcaactattgaatatcttatcaagagtatg
atgaatgatgatatatccacctgttatcagcgcgtacacactcttaagaggcagaatgga
cttgccctgcaagatattataaccggtgcttatgaatacatacagcaaattgaattccca
agggctacacgattgcatttattagaaaatcttgctgaaatagaatacaggttgtctacg
ggatcttcagaaacaatacagctcagtgcacttatcgcttcgttcaaactgggaattgat
attgcagcaaaagaaacttaa
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