Wallemia ichthyophaga: J056_004598
Help
Entry
J056_004598 CDS
T03457
Name
(RefSeq) Suppressor of stem-loop protein 1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
wic
Wallemia ichthyophaga
Pathway
wic03022
Basal transcription factors
wic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J056_004598
09124 Replication and repair
03420 Nucleotide excision repair
J056_004598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wic03021
]
J056_004598
03400 DNA repair and recombination proteins [BR:
wic03400
]
J056_004598
Transcription machinery [BR:
wic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
J056_004598
DNA repair and recombination proteins [BR:
wic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
J056_004598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
Motif
Other DBs
NCBI-GeneID:
20377550
NCBI-ProteinID:
XP_009268068
UniProt:
R9AGI9
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MSLEREEYDDNSEDSDILDADDGDYSSGKPSKPPKKDTGYSWESEYKRSWDVVAEDESGS
LTTSVNAFIERNKRRRRLGGEAIQRAIIRHTLLVLDLSSAMSDRDMRPNRYLLSLEYARE
YAREYFDQNPIGQLGCIAMRNGVAEWISKMTGSAHDITKALTNKNKLEPSGEPSLQNALE
MGRASMTHLPTHASKEIVIVYGALTTCDPGNIHDTLRSLMNDKVRVNIISLAAEVRILRE
IAEKTGGTFYVALDEVHYKDILFETIPPPAIHKADTPNTLNTSNTSNTADLMQMVNYVEK
AIYVRDAVVSYVRYQQIALFVIWLLLVVHI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtcattggaacgtgaggagtacgatgacaattctgaagatagtgatattctcgacgct
gatgacggggattattcaagtggtaaaccatcaaaaccgcctaagaaggatactggttat
agctgggaatctgagtataaacggagctgggatgtcgtcgcagaggacgaatcaggttca
ctcactacctctgttaatgcttttattgagcgtaataagcgcaggcggcgacttggtggt
gaagctatacagcgcgctatcatcagacatacactactcgttttagacctcagcagcgct
atgagcgatagggatatgcgtcctaatcgttatctgctatctctcgaatatgcacgcgaa
tatgcacgcgaatactttgaccagaatccaatcggtcagcttggttgtattgctatgcgc
aatggcgtggccgaatggatttctaaaatgactggaagtgcacacgatatcaccaaagcg
ttaaccaacaagaataaacttgagccttctggtgagccttccctacagaatgctttggag
atgggaagagcgtctatgacccacctccctacacacgcatcaaaggaaattgtcatcgtt
tatggcgcactcaccacttgcgaccctggaaatattcatgacacactacgttcacttatg
aatgacaaagttagagttaatataatatctttagcagcagaagttagaatattacgtgaa
attgctgagaaaactggtggtacattctacgttgccctcgatgaagttcattataaagat
attctatttgagactattccgccaccagcaatacacaaagccgacacgccaaatacatta
aacacatcaaacacatcaaatactgctgatctcatgcaaatggtgaattacgtcgagaag
gctatctatgtccgagatgcggtagtaagctatgtgagataccaacagattgcgctgttt
gtgatttggttgttgttagtagtccacatctag
DBGET
integrated database retrieval system
