Wallemia ichthyophaga: J056_004636
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Entry
J056_004636 CDS
T03457
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
wic
Wallemia ichthyophaga
Pathway
wic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J056_004636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wic03400
]
J056_004636
Enzymes [BR:
wic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
J056_004636
DNA repair and recombination proteins [BR:
wic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J056_004636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
RLL
Motif
Other DBs
NCBI-GeneID:
20377588
NCBI-ProteinID:
XP_009268106
UniProt:
R9AGR9
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MPPKRKADGDDKKAPETKKSKAKEPVKPLDPTQPVNKQLPEELGAYEKGEGVTRMTCWNI
AGYNASVKKGMHRYINAEPADLLVLTETKIDKEPNDEILKSNYKHSVWTGSTKKGYAGIA
VLWNGEEARNVETILPTHPNQDSTRGRIITLEFEDKFVIGTYVPNAGQGLKAMDDKVAWN
SAFKTYLHDLNEKKSVVWLGDLNVCHDSKDIRNDESNWNKSAGWTETEVNGYKEQLSDKF
VDAWKELHPDNVGQYTYFGYRFDARSKGIGWRIDSCVVSRGLMGRVEDVVIRMEVYGASD
HVPVCIDFKAVDEQASK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgccacccaagcgtaaggcggacggcgacgataagaaagcaccagaaacgaagaaaagt
aaggcgaaagagccagtgaagccactagaccctacgcagccagtaaataagcagctgccg
gaagagttgggagcgtatgagaaaggcgaaggcgtgacgcgtatgacgtgctggaatata
gcgggatacaacgcgtcagtaaagaagggaatgcacagatatatcaacgctgagcctgca
gatctactcgtattgacagagaccaaaattgacaaagaaccgaacgacgaaattctcaag
agtaattacaagcattcggtttggacaggcagtacgaagaagggatacgcggggattgcg
gttttgtggaatggtgaggaagcgcgcaatgtggagacaattctcccaacgcatccaaat
caggacagcactcgtggacgtatcattacactcgagttcgaggataagtttgtgataggc
acttatgtccccaatgcaggacagggattgaaggcgatggacgataaggtagcttggaac
tctgcgtttaaaacgtatcttcacgatctaaatgaaaagaagagcgtggtgtggctcgga
gatttgaacgtctgccacgatagcaaagatatccgcaatgacgagagtaattggaataaa
tcggcagggtggacagagactgaggtgaatggctacaaagagcagctttcagataagttt
gtcgatgcgtggaaggagctgcaccccgataacgtcgggcaatatacatattttggatat
agattcgatgctaggtctaaaggtattggctggcgtatcgacagttgtgtggtctcgaga
ggtttgatggggcgtgtggaggatgtggtgatcaggatggaggtgtatggcgcgtcggat
cacgtccccgtatgcatagacttcaaggccgtcgatgaacaagccagcaaatga
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