Wallemia ichthyophaga: J056_004697
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Entry
J056_004697 CDS
T03457
Name
(RefSeq) General transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
wic
Wallemia ichthyophaga
Pathway
wic03022
Basal transcription factors
wic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J056_004697
09124 Replication and repair
03420 Nucleotide excision repair
J056_004697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wic03021
]
J056_004697
03400 DNA repair and recombination proteins [BR:
wic03400
]
J056_004697
Transcription machinery [BR:
wic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
J056_004697
DNA repair and recombination proteins [BR:
wic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
J056_004697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
KA1_BRSK
I-TevI_ZnF
Motif
Other DBs
NCBI-GeneID:
20377649
NCBI-ProteinID:
XP_009268162
UniProt:
R9AFI9
LinkDB
All DBs
Position
Unknown
AA seq
259 aa
AA seq
DB search
MATTSNHLSVVLELKNKNVSLSSLKQLLVFINLHLSNSDLNSASVHLNNKILFDTHEDDA
NFSQLSEVFVECVRDFYRTDKPVKATLATTLAQSLCHINRKLNEASASSDSPHSFRILVI
TTSDDVPSHYVSLMNSIFAAQKAKILVDVCELYNSNTIFLQQAAHLTGGNYIQVKYIDSL
IQYLIMAFLPNHALRHKLVQPRSDKVDFRAACFCHKRIVDMAYICSVCLSIFCHPPQRCS
TCDSPFPVHTLTKFGAHGM
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacgtcaaaccatctgagcgtggtccttgagttgaaaaataaaaatgtttct
ctatcttcgttgaagcagctgctcgtatttattaatttgcatttaagtaattccgacttg
aattcagcctcggtgcacctcaataataagattcttttcgatacgcacgaagatgacgca
aacttcagccagctctctgaggtgtttgtggagtgtgtgcgggatttctatcgcacggat
aaacccgtcaaagccacgctagccaccactctcgcccagtcgctctgccacatcaaccgg
aagctaaacgaagccagcgccagctcagactccccccactccttccgcattctcgtaatc
actacctccgatgatgtcccttcacactacgtcagcctcatgaactcgatttttgctgca
caaaaagctaagatactcgtcgacgtgtgcgagctgtataacagcaacaccatcttcctt
caacaggcagcgcatctcaccggcggtaactacatacaagtcaagtacattgatagcctc
atccagtatctcatcatggctttcctcccaaaccacgccctcaggcataagctcgtccag
ccacgctctgacaaggtcgatttcagagctgcctgtttctgccataagcgtatcgtggat
atggcttacatctgctctgtctgtcttagtattttctgccatcccccacaacgctgctcg
acatgtgacagtccgttccctgtgcatacgctaactaaatttggagctcacggtatgtaa
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