Wallemia ichthyophaga: J056_004830
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Entry
J056_004830 CDS
T03457
Name
(RefSeq) Regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
wic
Wallemia ichthyophaga
Pathway
wic03013
Nucleocytoplasmic transport
wic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
J056_004830
03015 mRNA surveillance pathway
J056_004830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wic03019
]
J056_004830
Messenger RNA biogenesis [BR:
wic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
J056_004830
mRNA cycle factors
P-body specific factors
J056_004830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
20377782
NCBI-ProteinID:
XP_009268295
UniProt:
R9AFN6
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MNLQGDVKRHLDLKHSNQLAYKFVEDNGVENTPLKLDSSLKRHTTFLRRLKLNLGAENVD
NNIKDIHQLSLSKHLEEIVTNIVEGVIKCKSEKDSWAAVETISALHQRFPISFSSPLISL
LSSSLSPPSKSQLAALSPEQRDKEEAARINKQRPILRVAGELYLVGLIPDSPSKDGPKNW
LFVKLKDLLATDKDHSNTPILISFIKHFSALIYGLDGDQHTLIDSPSQERFKALSSAYYD
TLTRKLVKEHLKLQDQDKRNHEAYIRSGEIFQDRQQSYEKLTKAYEKLLNSTQTLSELLH
LDMPQLPKEQSKGLGGLVVADGSTPYNRDHDEYDSTIGKWEDEDAKNFYEDVFDLADVLP
PAVFANVLGKKVDQKDDIGESPAQKIQTDEQMDKEKEQLVSTLTSTPDDPDEGISAGPSA
QLNALFARLPEMNNRAMIDQVAVEFAMLNSKAARKRAIKSIAAVPRNRSDVLPYYARLTA
ILNKHMPDIGKGVVDLLDDEFRYLQRKKNLVKELAESRTKNARFISELTKFSVVPTHYIL
HCYKVLLDDFTGVNIDVLAILLETCGRYLLRSEETGEKMKIFLELMKRKQQLQHLDQRQQ
LILENAYYHCNPPERASRPVKERTPTELFIRHLIYDVLTRRTVEKVSKLLRKLHWEDEGV
INVLLNVFTKVWKISYASIPLLAILVYDLQRFHPAFCVMVVDRVLEDVKSGVEQNIFKYN
QRRVAAVRYLGELYNYRSVQSGVIFDVLWMLVTWGHVGGRPLPGMASGGVRDAPDDFFRI
RLVCTLLDTCGACFDSGLQRKRLDDYIAFLMMYVATKSTLPMDMDFMYTDTLDALRPGIA
IKRSFEDAVRGVDEMMADDHHLLPDQGGEEEVVYRDEESGEEENGDGEGEGEEGQVEATE
PVEADEADEGDEEDESDSDSEGDAEMDDDVVLRESERGREKEEIPPEEEDEFNRELAKMA
TDNSEAKKVDKRALFDLSLPAKKKTEEEGGSGDPSQMKFTVLTKKGAKQQTRTVEVPSES
PLAVNSRTNALQDQHEQAQLKKLVLDYEKRDAAQQDVNEKKRWEQLSKATGMKINFKQDG
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacaaggagatgttaaaaggcatttagacttgaaacatagtaatcaattggct
tataagtttgttgaggataatggcgtcgagaatacaccactcaagctagattcctccttg
aagagacacactaccttccttaggcgtctcaaactcaatttaggcgctgagaacgttgac
aataacatcaaagatatccaccaactcagcctatccaaacatctcgaagaaattgtcaca
aacatcgttgaaggcgtcatcaaatgcaaatctgaaaaggattcttgggctgccgtcgag
accatctccgctctccaccaaagattccctatctccttctcttctcctctcatttccctc
ttatcttcctctctatcccccccttcgaaatctcaactagccgctctctcccccgagcaa
agagacaaagaagaagctgctagaattaacaagcaacgccctattctcagagtcgctggt
gaattatacctcgttggcctcatccccgactctccctctaaagatggtcctaagaattgg
ttatttgttaagcttaaagaccttctagcaaccgataaagatcactcaaacaccccgatt
ctcatctccttcattaaacacttttctgctctcatttacggtcttgatggtgatcaacac
actctcatcgattctccctcccaagaacgcttcaaagccctttcttccgcctactacgac
actctaacaagaaaactcgtcaaagaacacctcaaactgcaagatcaagataaacgcaac
cacgaagcttacatccgctcaggtgaaatctttcaagacagacagcaatcttacgaaaaa
ctcacaaaagcttatgaaaagctacttaactccactcaaaccctttctgaactactccat
ctagacatgcctcaattaccaaaagaacagtcaaagggattaggcggtttagtcgtcgct
gatggctccaccccttacaacagagatcatgacgagtatgattctactatcggtaaatgg
gaagatgaggatgccaaaaacttttacgaggatgtctttgacttggctgatgtcctccct
cctgctgtcttcgcaaatgtcttgggtaagaaggtcgaccagaaggacgatattggcgag
tcaccagcacaaaaaatccaaacagatgagcaaatggataaggaaaaagaacagctcgtc
tctacgctcacttccacacccgacgacccagatgagggtatatctgccggcccatctgcc
cagctcaacgccctctttgccagactgcctgagatgaacaaccgcgcaatgattgaccag
gtggcagttgagtttgccatgcttaactctaaggctgctcgtaaaagggccatcaagtca
atagccgctgttccacgcaacaggtctgatgtcttaccctactatgcgcgtttaactgca
attctcaacaagcacatgcccgatatcggcaagggtgtggttgatcttcttgacgatgag
ttccgctatttgcaacgcaagaagaatttagtgaaggagctggctgagtcgcgcaccaag
aatgcacgcttcatatctgagttgaccaagttcagtgtagtcccaacgcactacatcctc
cactgctacaaggtgttgctggatgattttacgggagtcaacattgatgtgctggccatt
cttctcgagacgtgcgggcgttatctgctgcgcagcgaagagacgggggagaagatgaag
atattcctcgagctaatgaaacgcaagcaacagctacaacacctggatcagcgtcagcaa
ctcatcctcgagaacgcttactaccactgcaacccacctgaacgggctagtcgacctgtc
aaagaacgcacgccaacggagctttttatccgccacctcatctacgacgtcctcacgcgc
cggaccgtcgaaaaggtttcgaagctcctccgcaagctgcactgggaagatgagggagtg
ataaacgtcttactcaacgttttcacgaaagtgtggaaaatttcctacgcttctatccca
ctgctggccatactggtgtatgatctacagcgttttcatccggcattctgcgtgatggtc
gtcgaccgtgtacttgaagacgttaagagcggtgtagagcagaatatattcaaatacaat
caacgacgggtcgctgcagtgcgatacctgggtgagttgtacaactaccgcagtgtgcag
tctggggttatattcgatgttttgtggatgctggtgacatggggacatgtcggtggacga
ccccttcccggaatggctagcgggggtgtgcgtgatgcacccgacgactttttcaggata
cggttagtgtgcactctgctagatacgtgcggagcgtgcttcgatagtggcttgcagagg
aagcgcctcgatgactatattgccttcttgatgatgtacgtggctactaaatcaaccctg
ccgatggacatggactttatgtacacggataccctcgacgctctcagaccggggatagcg
ataaagaggtcgttcgaagacgctgttagaggcgtcgatgaaatgatggcggatgatcac
catcttctccccgaccaaggtggtgaggaggaggttgtttatcgcgacgaggagagcggg
gaggaggaaaacggagatggtgaaggtgaaggtgaggaggggcaggttgaagcaactgaa
cctgttgaagccgatgaagctgatgaaggcgatgaagaagacgagtcagactcagacagc
gagggtgacgctgagatggacgacgacgtagtcctgcgcgagagcgagagagggagagag
aaagaggagataccgcctgaggaagaggacgagtttaacagggagctggcaaagatggct
acggacaacagcgaagcgaagaaggtggacaagcgcgcattgttcgatctatcgctcccc
gccaagaagaaaacggaggaagagggaggttcaggtgacccaagtcagatgaaattcaca
gtactcactaagaaaggggctaaacagcaaacgcggacggttgaagtaccttctgagtcc
ccgctcgctgttaactcgcgcacgaatgcactccaggatcagcatgagcaggcacaactg
aagaagttagtgttggattatgagaagagagacgcagcacagcaggatgtgaatgaaaag
aaacgctgggaacaactgtcgaaagcgacgggaatgaagataaatttcaagcaggatgga
taa
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