Winogradskyella sp. J14-2: BWZ20_01835
Help
Entry
BWZ20_01835 CDS
T04714
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
wij
Winogradskyella sp. J14-2
Brite
KEGG Orthology (KO) [BR:
wij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
wij03016
]
BWZ20_01835
Enzymes [BR:
wij01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BWZ20_01835
Transfer RNA biogenesis [BR:
wij03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BWZ20_01835
Prokaryotic type
BWZ20_01835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Dicer_N
Motif
Other DBs
NCBI-ProteinID:
APY07118
LinkDB
All DBs
Position
complement(374185..374970)
Genome browser
AA seq
261 aa
AA seq
DB search
MFDKRFYYLIKIQYLGYRFHGWQKQPDVKTLHLMIDKTLKYILGETRFKTLGAGRTDAMV
SANEAALELFIYNTPITDFTAFLDLFNYNLPQDIRALSIEEVDKDFNIIQDSKIKEYHYV
FSHGQKNHPFCAPILTTILEPLNINVMKEGARLFKGTHNFKPYCYKATDKGEYRRTIEYC
EIMDNAIYTANFFPQKSYVFIIRGKGFMRNQIRLMMGCLIKLGRGEVTLDYISNSLKEDS
KEIMDYVAPASGLILHKLKFD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataaacgcttttattaccttataaaaatacaatatcttggctatcgctttcat
ggttggcaaaaacagccagatgtaaaaacattacatctcatgatagataaaaccttaaaa
tatatattgggcgaaacaagatttaaaacacttggagcaggacgaacagatgccatggtt
tctgcaaatgaggctgcattagaattatttatatacaacacgccaattacagattttaca
gcttttttagatctttttaattataatctaccgcaagatataagggctttgtctattgaa
gaagtggataaggattttaatattattcaagattctaaaataaaggaataccactatgtg
ttttctcacggtcaaaaaaatcacccgttttgtgcgccgattttaacgaccattttagaa
cctcttaacatcaatgtaatgaaggaaggagcaagattatttaaaggtacccacaacttt
aaaccctattgctataaagctacggacaaaggtgaatatcggagaacaattgaatattgt
gagattatggataatgctatatacacagctaatttcttcccgcagaagtcgtatgtattt
atcataagagggaaaggttttatgcgcaaccaaattcgattaatgatgggatgtcttata
aaattaggtagaggagaggtaacactagattacattagcaatagtcttaaggaagatagt
aaggaaattatggattatgttgctcctgcctctgggcttatacttcataaattaaaattt
gattaa
DBGET
integrated database retrieval system
