Winogradskyella sp. J14-2: BWZ20_05625
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Entry
BWZ20_05625 CDS
T04714
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
wij
Winogradskyella sp. J14-2
Brite
KEGG Orthology (KO) [BR:
wij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wij03032
]
BWZ20_05625
03400 DNA repair and recombination proteins [BR:
wij03400
]
BWZ20_05625
Enzymes [BR:
wij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BWZ20_05625
DNA replication proteins [BR:
wij03032
]
Prokaryotic type
DNA Topoisomerases
BWZ20_05625
DNA repair and recombination proteins [BR:
wij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BWZ20_05625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
RP-C
Toprim_4
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
APY07805
UniProt:
A0A1P8RV71
LinkDB
All DBs
Position
complement(1204884..1207391)
Genome browser
AA seq
835 aa
AA seq
DB search
MSKNLVIVESPAKAKTIEKFLGKDYKVESSFGHISDLPSKELGVDVDGDFEPNYKVSKDK
RDVVKKLKALAKKAETVWLASDEDREGEAIAWHLAEALDLDKEKTKRIVFHEITKSAINK
AIENPRAIDYNLVDAQQARRVLDRIVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVERER
EIQNFNAEASYRVDAEFTSEDGKSFKAKLPKNFGSEEEALEFLNNNKAATYQVADLQKKP
AKKSPAAPFTTSTLQQEASRKLGFSVSRTMSNAQRLYEAGLITYMRTDSVNLSDEARQGA
EKEITSAYGSEYSKPRNYKGKSKGAQEAHEAIRPTDFSNHSVNVERDQARLYDLIWKRAI
ASQMSEAKLERTNLKIQINSSNKVSEQFSANGEIITFDGFLKVYLEGTDDEDAEQDGILP
DLKVGEELANNYITATQRFTRPPSRFTEASLVKQLEELGIGRPSTYAPTISTIQNRNYIE
KGTHEGDERAYKQLVLSDQNIKEKELTEKVGSNKGKLVPTDVGFIVTDFLVNHFESILDY
NFTARVEESFDDIAEGKEDWKAMMKDFYKGFHPQVEDVRENAERETGERILGTDPKTGRQ
VSVRLGKFGPMVQIGTVDEEEKPQFASLLPDQQLNTITYEEAMDLFKLPKALGHYKDDEV
EVNVGRYGPYVRYGKKFVSLPQGVDPLSVELDEALVYIKEKEKADAPIYTYEGLEVTKGK
GRFGPFIKWNNMFINVNKKYDWDNLSEQDIVTLIEDKIQKEKDKLIHVWEEEGIRVEKAR
WGRHNVIKGKQKVELAKTVDVSDMTLEEAKAILEKNAPKKKTKKTTKKKTTTKKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaatctagtcattgtcgagtcacctgcaaaggcaaaaacaatagagaaattt
ttaggaaaagattataaggttgagtcaagttttgggcatatttcagatttaccgtccaaa
gaactaggagtcgatgtagatggagattttgaaccgaactacaaggtctcaaaagacaag
cgcgatgttgtaaaaaaactaaaagccttagcaaaaaaagcagaaacagtttggctagca
agtgatgaagatcgagaaggagaagccatagcatggcatttggcagaagcactagattta
gataaggaaaaaacgaagcgtattgtttttcatgagattacaaaaagtgcaataaataaa
gctattgaaaaccctagagctattgattataacttagtagatgcgcagcaagcaaggcgt
gttttagaccgtattgtaggttacgagttgtcgccagttttatggcgaaaagttaaagga
ggtttatctgcaggtagagtacaatctgtatctgtaaggcttatcgttgagcgcgagcgc
gaaatacaaaactttaatgctgaagcatcctacagagtagatgcagagtttacatcagaa
gatggaaaatcatttaaagctaaattgcctaagaattttggttcagaagaagaggcttta
gaatttttaaataataataaagcagcgacttatcaagtagccgacctacaaaaaaaacca
gcaaaaaaatcaccagctgcaccttttacaacatctaccttgcagcaggaagcatccaga
aaattgggcttctcagtaagtagaaccatgagcaatgcacagcgtttatacgaagccggt
cttataacttatatgagaacagatagtgttaatctgtctgatgaggcaagacaaggcgct
gagaaagagattacatcggcttatggatctgaatatagcaaaccaagaaattacaaagga
aaatctaagggtgctcaagaggctcacgaagcaataaggccaacagatttttctaaccat
tcagtaaatgtagaacgtgatcaagcacgactttacgatttaatttggaaacgtgccatt
gcatcgcaaatgagtgaagctaaactagagcgcactaacttaaaaattcaaattaatagt
tctaataaagtaagtgagcaattctctgctaatggagaaatcataacctttgatggattt
ttaaaagtatacctagaaggtactgatgatgaagacgctgaacaagatggtattttgcca
gatttaaaagtaggcgaggaattagctaacaactatataacagcaacacaacgttttacc
agacctccttcaagatttacagaagcatctttggttaagcaattagaagaattaggtatt
ggtagaccatccacatacgcaccaacaatttctacaattcagaatagaaattacatagaa
aaagggactcacgaaggagatgaaagagcctacaaacaattagtcctttcagaccaaaat
attaaagaaaaggagcttacagaaaaagtaggttctaacaaaggtaaattagtgccaaca
gatgttggttttattgttactgactttttggtaaatcattttgaaagtattttagattac
aattttacagcaagagtagaagagagttttgatgacattgcagaaggtaaagaagactgg
aaagcaatgatgaaagatttttataaaggttttcatcctcaggttgaagatgttagggaa
aatgctgagcgcgaaacaggcgaacgtattcttggtacagatcccaaaacaggacgccaa
gtaagtgtgcgtttaggtaaatttggtcctatggttcaaataggtacagtagatgaagaa
gagaaaccacagtttgcaagcttattgccagatcagcagcttaataccattacctacgaa
gaggctatggatttatttaagcttccaaaggctttagggcactataaagacgatgaagtt
gaggttaatgtcggccgttatggtccatatgtaagatatggtaaaaagtttgtatcctta
cctcagggagtcgatccattaagtgtagaattagatgaagccctagtatatattaaagag
aaagaaaaggcagacgctcctatctacacgtatgaaggtttagaagttacaaaaggcaaa
gggcgttttggtccatttattaaatggaacaacatgtttataaatgtgaataaaaaatac
gattgggataatttatctgaacaagacattgtaactttgattgaggataaaatccaaaaa
gaaaaagataaacttattcatgtttgggaagaggaaggcattagagtagaaaaagcacgt
tggggaagacacaatgttataaaaggtaagcaaaaagtagaattagctaagaccgtagat
gtttctgatatgaccttagaagaggcaaaagctattctagagaaaaatgcgccaaaaaag
aaaaccaaaaaaaccacaaagaaaaaaacgaccactaaaaagaagtaa
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