Winogradskyella sp. J14-2: BWZ20_07225
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Entry
BWZ20_07225 CDS
T04714
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
wij
Winogradskyella sp. J14-2
Pathway
wij03030
DNA replication
wij03430
Mismatch repair
wij03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BWZ20_07225
03430 Mismatch repair
BWZ20_07225
03440 Homologous recombination
BWZ20_07225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wij03032
]
BWZ20_07225
03400 DNA repair and recombination proteins [BR:
wij03400
]
BWZ20_07225
Enzymes [BR:
wij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BWZ20_07225
DNA replication proteins [BR:
wij03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BWZ20_07225
DNA repair and recombination proteins [BR:
wij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BWZ20_07225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
GPR128_GAIN_subdom_B
HHH_3
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
APY08101
UniProt:
A0A1P8RW05
LinkDB
All DBs
Position
complement(1565145..1569530)
Genome browser
AA seq
1461 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDTDNWPRCIQIAWQLHDAMGNCIDHQDYLVKPDGFNIPY
DAEKIHGISTELAEEQGISLAEVLEKFNAVLEKTKFVVGQNVGFDLNIMGAEFVREDVAN
QLQELPVLDTCTEHTAELCKIPGGRGGKFKLPTLTELHEFLFNQPFAEAHNATADVEATT
RCFLELVRRKEYTKEQLDVQPDYFVKFSEANPQPIQLIGLKHLNLKRESAKINARLQKEQ
SQEIPTQTNKEAIAKLADAAFVHLHNHSQFSILQSTISIGDLVAAAAKENMPAVALTDHG
NMMGAFHFVQAVSNHNKSVKAKHKEAEENGEEKKGKLIKPIIGCEFFVCEDHTDKTRKDN
GYQIVLLAKNKKGYHNLAKLSSAAFTDGFYYVPRIDKKLIEQYKEDLICLTGNLYGEVPS
KVLNIGENQAEEALIWWKDTFADDLYIELMRHNQEDENRVNQVLIQFAHKHDVKLIATNN
TYYVEQENANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSTEEMKALFRDIPE
AIVNIQEVVDKIEPFELARDVLLPAFDIPDEFKHQEDEVDNGKRGENAYLRHLTYEGAKK
RYGEITPEIAERLDFELSVIENTGYPGYFLIVEDFIREARKMDVSVGPGRGSAAGSVVAY
CLWITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMQYVIDKYGANQVAQIIT
YGTMAAKSSIRDTARVLDLPLNEADHIAKLIPNMSKLGKIFGKSEKELASKFRAEELEKV
NQLLNISDGSDLQAETVNQARVLEGSVRNTGIHACGVIITPGDITNYVPVSVAKDSDLYV
TQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKIVKARHGIELDPENFPLDDEETYALFQR
GETVGIFQYESPGMQKHMKHLKPTVFDDLIAMNALYRPGPMEYIPSFINRKHGKEEIIYD
LPEMEEYLKETYGITVYQEQVMLLSQKLADFTKGEADVLRKAMGKKQKAVLDKMKPKFIE
QAAAKGMDKTKLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSN
NMNDIKSVTFFMEECKRMRLPVLGPSVNESYYKFSVNQDNAVRFGMGAIKGVGHGAVKTI
VENRKKDGNYKSIFDLAKRVDLRAANKKSFEGLAYAGGFDCFEDTHRAQYFAHDGDGITF
LEKAMKYGAKHQENENSAQVSLFGEASGVEIAEPQVPPCEDWGTMEKLSREKEVVGIYIS
GHPLDDFKIEMKNFCNGTISVFNDLEAIVNREITFGGVVTDVQHRVSKQGKGWALFTIED
YTDSYEFRIFGEDYLKFRHFFVVNSFVYVRAFVREGWTNRETGQKGDPRIQFNNFQLLHD
VMETYAKKLSIQLNIHDLEEDTITRLQDLMRMHEGNKSLNFLVYDNSEKLKLTMPSRKQK
VKISQELLNELKGLDVKYKLN
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatcttcgatactgaaaccacaggtttaccaaagcgttgggatgcaccaata
acagatacagataactggccaaggtgtattcagatagcatggcagttgcatgatgctatg
ggtaattgtatagatcatcaagattatttggttaagccagatggctttaatattccatat
gatgctgagaaaatccatggtatttctacagaattggcagaagagcaaggtatttctctt
gccgaagttttagaaaaatttaatgctgttttagagaaaactaaatttgtggttggtcag
aatgttgggttcgatctcaatattatgggagccgaatttgttagagaggatgtagcaaac
caattacaagaattaccagtattagatacctgtacagagcatacggccgaattgtgtaaa
attcctggcggtagaggaggaaagtttaaactgccaaccttaacagagttacacgagttt
ttattcaaccagccatttgccgaagcccataacgcaactgccgatgttgaagccacgaca
cgttgttttttagaattagttaggcgaaaagaatatactaaagaacagttagatgttcaa
ccagattattttgtaaaattttcagaagccaatccgcaaccaattcagctaattggacta
aaacatcttaatcttaaacgcgaaagtgccaagataaatgcaaggcttcaaaaggagcag
tctcaagaaataccaacacaaacaaacaaagaagctattgcaaaattggctgatgcagcg
tttgtgcatttgcataaccattctcagttttcaattttacaatctaccatcagtattggt
gatttagtagcggcagcggcaaaagaaaatatgcctgccgttgcgctaacagatcacgga
aatatgatgggcgcctttcactttgttcaagcagtttctaaccataacaagtctgtaaaa
gcaaagcataaagaggctgaagaaaatggtgaagaaaagaaagggaaactaataaaacct
attatcggttgtgagttttttgtttgcgaagatcataccgataaaacccgaaaagataac
ggttaccaaattgttcttttagcaaagaataaaaaaggctatcacaatttggcaaagctg
tcttctgcagcttttactgatgggttttattatgtaccaagaattgataaaaaactcata
gagcagtacaaagaagacctcatttgtctcacaggaaacctctatggtgaagtgccgagt
aaagtcctaaatattggtgaaaaccaagccgaagaagccttaatctggtggaaggacacc
tttgcagatgatttgtatatcgagttgatgcgtcataatcaggaagatgaaaatcgtgtt
aatcaagtacttattcaatttgctcataagcacgatgtgaagctaattgctacaaataat
acttactacgtagaacaagaaaacgccaatgcacacgatattttattgtgtgtaaaagat
ggtgaaaaacaagccacaccaataggtcgtggtcgtggttatcgttacggattgccaaat
caagaatattactttaagtcaactgaagagatgaaagcgctctttagagacattcctgag
gctattgtgaacattcaagaagtggttgataaaattgaaccgtttgaattggctcgtgat
gtattacttcctgcttttgatataccagatgaattcaaacatcaagaggatgaagtagat
aatggtaagcgcggagaaaatgcctatttaagacacttaacatacgaaggtgctaaaaag
cgctatggagagattacaccagaaatagcagaacgtctcgattttgagttgagcgttatt
gaaaatacaggatatcctggttacttccttattgtagaggatttcattcgcgaagcccga
aaaatggatgtgtccgttggtcctggtcgtggttcggcagcaggttcggtagtagcatac
tgtttgtggattaccaacatagatccaataaagtacgatttactttttgagcgtttctta
aatccagatcgtgtgagtatgccagatatcgatatcgattttgatgatgaaggtcgtggt
cgcgttatgcaatacgttatcgataaatatggagctaatcaggtggcgcagatcattact
tatggtacaatggctgctaaatcttcaattagagatacggcacgtgtgttggatttgcca
ttaaatgaagcggatcatattgctaaactcattccgaatatgtccaaactcggaaagata
tttggtaagagcgaaaaagaattagcaagcaagtttagagctgaagaattagaaaaagtc
aatcaactattaaatatctcagacggttcagatttacaggcagaaacggtaaaccaagca
agagttttagaaggttctgtaagaaatactggcattcatgcttgtggtgttatcattaca
ccaggtgacattaccaattatgtacctgtttcggtagctaaagattcagatttatacgtt
acgcagtttgataactctgttgtagaaagtgctggattactgaagatggatttcttggga
ttaaagaccttaactttaattaaagatacggttaagattgtaaaggcacgacacggtatt
gaactcgatcctgaaaactttccgttagatgacgaagaaacgtatgcgttgttccaaaga
ggtgaaacggttgggatttttcagtatgaatcgccaggaatgcaaaagcatatgaagcat
cttaagccaacagtttttgatgacctcattgcaatgaacgccttgtatcgtcctggacct
atggaatatattccaagttttattaatagaaaacatggtaaagaagagattatctacgat
ttacctgaaatggaagaatacctcaaggaaacttatggtattacggtttatcaagagcaa
gtaatgctattgtcccagaaactggctgattttaccaagggtgaagccgatgtgttgcgt
aaggccatgggtaaaaagcaaaaagcagtactagataaaatgaaacctaaattcattgaa
caggcagctgctaaaggtatggataaaacgaagcttgaaaaaatctggaaagattgggag
gcctttgcgagttacgctttcaataaatctcattctacgtgctatgcttggattgcatac
caaacggcatatttaaaggcgcattatccagcagaatatatggctgcggtattgtctaat
aatatgaacgatattaagtccgtaaccttctttatggaagagtgtaaacgtatgcgttta
ccagtgcttggaccaagtgttaacgagagttattataaattctcggtaaatcaagataat
gcagttcgttttggtatgggagctataaaaggtgttggtcatggagctgtaaaaaccatt
gtagaaaatagaaagaaagacggcaactataagtctatttttgatttagccaaacgtgta
gatctaagagcagccaataaaaaatcattcgaaggtttagcttatgctggtggttttgat
tgttttgaagatacacaccgtgctcaatattttgctcacgatggtgatggtattaccttt
ttagaaaaggccatgaagtatggtgctaaacaccaagaaaatgaaaattctgcacaagtg
agtttatttggtgaggccagtggagtagaaattgcagaaccacaagtaccaccttgtgaa
gattggggaacgatggaaaaactttcaagagaaaaggaagtggttggtatttatatttct
ggtcatccgctagatgatttcaaaattgaaatgaagaatttctgtaatggtaccatctct
gtttttaatgatttagaagcaatcgttaatagagaaattacttttggtggtgttgttaca
gacgtgcaacatcgtgtaagtaagcaaggcaaaggctgggcattatttaccatcgaagat
tatacagatagttatgagtttagaatttttggggaggattatctaaagtttagacatttc
tttgtggtaaattcatttgtttatgtgcgcgcgtttgtgcgtgaaggttggactaataga
gaaacaggccagaaaggagatcctagaattcagtttaataattttcaattattgcatgat
gtaatggagacctatgctaagaagttatctattcagctaaatattcacgatttagaagaa
gacacaataactcgattgcaagatctgatgcgaatgcatgaaggcaataaaagcttaaat
tttttagtctacgacaattcagaaaaactaaaactaaccatgccaagtagaaagcaaaaa
gttaagatttctcaggaattattaaatgagttaaaaggtctagacgtaaagtataagctg
aattag
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