Winogradskyella sp. J14-2: BWZ20_07440
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Entry
BWZ20_07440 CDS
T04714
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
wij
Winogradskyella sp. J14-2
Brite
KEGG Orthology (KO) [BR:
wij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
wij03016
]
BWZ20_07440
Enzymes [BR:
wij01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BWZ20_07440
Transfer RNA biogenesis [BR:
wij03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BWZ20_07440
Prokaryotic type
BWZ20_07440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
APY08143
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All DBs
Position
1609392..1610102
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AA seq
236 aa
AA seq
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MKTVEDYKEGQVLLIDKPLTWTSFQAVNKLRWAIRKAYAIKKIKVGHAGTLDPLATGLLV
ICTGKMTKQINTFQGQEKEYTGTFVVGSTTPSYDLETEIDATFPIDHISEELIHETTKQF
IGKIEQFPPVFSAIKKDGKRLYEFARAGEAVEIKSREIEISEFEITDINALDNTLELNFR
VVCSKGTYIRSLAHDFGKALNSGAHLSVLRRTRIGDFKVENALSPEDYIATLPLDQ
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgtggaagattacaaagaaggtcaggttttattgattgataaacctcttacc
tggacttcatttcaggcggtcaacaagctacgttgggccattagaaaagcctatgccatt
aagaaaataaaggttggacatgctggtactttagacccgctagccacaggtttattagtg
atttgcactggtaaaatgaccaaacaaattaacacctttcaaggtcaggaaaaagaatac
acaggtacttttgttgtgggtagtaccactccatcttacgatttggaaaccgaaattgat
gctacctttccgatagaccatatttccgaagaactaattcacgaaacaaccaaacaattt
attggtaaaatagagcaatttcctccagtattttcagctataaagaaagatggcaaacgc
ttgtacgaatttgcaagagcaggtgaagctgtagaaattaagtcgagagaaattgaaatc
tctgagttcgaaatcacagatataaatgcactcgacaataccttagagctgaattttaga
gtggtttgtagcaaaggtacttacattcgatcgcttgcgcacgactttggaaaagcctta
aactctggcgcacatctatcggttttaagacgaacccgaattggtgattttaaggttgaa
aacgcactaagtcctgaagattatatagctacgcttccactagatcaatga
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