Winogradskyella sp. J14-2: BWZ20_14275
Help
Entry
BWZ20_14275 CDS
T04714
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
wij
Winogradskyella sp. J14-2
Pathway
wij03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BWZ20_14275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wij03400
]
BWZ20_14275
Enzymes [BR:
wij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BWZ20_14275
DNA repair and recombination proteins [BR:
wij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BWZ20_14275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA_C
Cas3-like_C_2
WHD_UBR1
TrmB
AAA_19
Zn_ribbon_6
nSTAND3
ATPase_2
Nrap_D6
AAA_30
Motif
Other DBs
NCBI-ProteinID:
APY09400
LinkDB
All DBs
Position
3165688..3168141
Genome browser
AA seq
817 aa
AA seq
DB search
MYFLDVILPIPLQKAFTYHITEAEAQFIKQGMRVAVPFGKSKIYTALAYKVHNNAPAAYE
AKTIHQILDEAPVVTELQLKHWEWIAKYYMCSLGEVMRAAMPNAFIIESETILVKNESAE
ISEADLKDDEFLIYEALQYQSSLKIEDVVSILDKKRILPVVNRLVEKGVLQLQEELYEKY
NPKLVRYVKLHKAYKSEEKLKELLDTLNKNATKQREVILTLFTLEASEQKPIKVSELSER
SGASLAIIRALIDKSILEEYYIQTDRVQFEGEGDEQTKQLSDAQTEALESIKVAFETKPV
TLLHGVTSSGKTEIYVKLIEEQLNLGNQVLYLLPEIALTTQLVQRLQDYFGEKVAVFHSR
YSGNERVEVWHNLKNNLEKAQLVIGARSALLLPFSNLGLIIVDEEHEQSYKQFDPAPRYH
ARDAAIVLANLHKAKTLLGSATPSLESYFNATQNKYGFVELKTRFNNVLMPDIELVDLAD
KYKRKRMKGHFSDRLIEEMAETLDEGFQIILFQNRRGFSPIVECTTCGNSPQCPNCDVSL
TYHQYRDQLRCHYCGYHTVMPKTCQACGNATLDTKGFGTEQIEEEVKVLFPDKKVARMDL
DTTRGKHGFEKIISKFEQREIDILVGTQMLTKGLDFRHVKLVGIMNADNLLNFPDFRAHE
RSYQLMTQVAGRAGRTDIRGKVLIQTYNPHHNILQQVSTNAYKDMFAEQMNDRYNFKYPP
IYRLIKITLRHKDYNRVNLAADWYAKSLRQVFKANVLGPEFPPISRIRNLFNKNILIKIP
QNQSLSKTKDAIMKIDNSFNAVKDFRSVRVVINVDNY
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atttacttcctcgacgtcatattgccaattccgcttcaaaaagcgtttacctatcatatt
accgaggctgaagctcaatttataaagcaaggtatgcgagtcgctgtaccctttggtaaa
agcaaaatttacacagctttagcttataaagttcataataatgcacctgcggcatatgag
gcaaaaaccattcatcaaattttagatgaagcacctgttgtaactgaattacaattaaaa
cattgggagtggattgctaaatattatatgtgcagtcttggtgaggtaatgcgagctgca
atgccaaatgcttttattatagaaagcgaaactattcttgttaaaaatgaaagcgctgaa
atctcagaagctgatcttaaagatgatgagtttttaatctatgaagctttgcaatatcaa
tcttctttaaagattgaagatgtggtttctattttagataaaaaacgaattcttccagta
gtaaatcgtttagtagaaaaaggcgtattgcaattgcaagaagaactttatgaaaaatac
aacccaaagttggtgcgttatgtaaagcttcataaagcgtataaatctgaagaaaaactt
aaagaattattagatacacttaataaaaatgcaacaaagcaacgtgaggttattttaacc
ttgtttacactcgaagcttcagaacaaaaaccaataaaagtttcagaattaagcgagcga
agtggagcatcattagctattattagagcactgattgataagtctattttagaagaatac
tacattcaaaccgatagagtgcagtttgagggtgaaggtgatgagcaaaccaagcaattg
agtgatgctcaaaccgaagcacttgagagcattaaagttgcttttgagaccaaaccagta
acacttttacatggtgtaacatcatctggaaaaactgaaatctatgtaaagcttatagaa
gagcagctaaatttgggtaatcaagtattatacttattgcctgaaatagctttaacaacg
caattggtgcaacgtcttcaggattattttggtgaaaaagttgcagtttttcatagtaga
tattcaggtaatgaacgtgttgaagtgtggcataatcttaaaaacaatttagaaaaagca
cagttggttattggagcacgttctgctttgttattaccgttttctaatttaggattgatt
attgtagatgaagaacacgagcaatcgtacaaacaatttgacccagcaccacgatatcat
gccagagatgctgctatagtcttagctaacctacataaggccaaaacacttttaggctca
gcaacaccaagtttagaaagttatttcaatgctacacaaaataaatatggattcgtagaa
ttaaaaacgcgttttaacaatgtgcttatgccagatatagagttggtagatttagcagat
aagtacaaacgcaaacgtatgaaaggtcatttttctgatcgtttaattgaagaaatggcc
gagacattagatgaaggttttcaaataatattatttcagaatagaagaggattttcgcca
atagtagaatgtaccacttgtggtaattcaccacaatgtcccaattgcgatgtaagtttg
acataccatcaatacagagatcagttgcgttgccattattgcggttaccatacggttatg
ccaaaaacctgtcaagcttgtggtaatgctacgttagatactaaaggttttggtactgag
cagattgaagaagaagtaaaagtactttttccagacaagaaagtggcgcgaatggactta
gataccacacgaggaaagcatggttttgaaaaaatcatttctaagtttgaacagcgtgaa
attgatattttagtgggtactcaaatgctaaccaaaggcttagattttagacatgtaaaa
ttggttggcatcatgaatgctgataatttgctgaacttcccagattttagagcacacgaa
cgtagctatcaattgatgacacaggtagcaggtagagcaggccggaccgatataagagga
aaggtgttgattcagacttataatccgcatcataatattttacagcaagtgtctacaaac
gcttataaagatatgtttgcagaacagatgaatgatcgttacaattttaaatatccacca
atctatcgtttaattaaaattacgttaagacataaggattacaacagagttaatctagca
gcagattggtatgctaagtcattaaggcaggtgtttaaagcaaatgttttaggaccagaa
tttccaccaatttccagaatacggaatttatttaataaaaacatcttaattaaaattccg
caaaatcaatcgctttctaaaaccaaagatgctattatgaaaatagataacagttttaat
gctgttaaggattttaggtctgtgagagtagttattaacgtagataattattaa
DBGET
integrated database retrieval system
