Winogradskyella sp. J14-2: BWZ20_14875
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Entry
BWZ20_14875 CDS
T04714
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wij
Winogradskyella sp. J14-2
Pathway
wij03420
Nucleotide excision repair
wij03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BWZ20_14875
03430 Mismatch repair
BWZ20_14875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wij03400
]
BWZ20_14875
Enzymes [BR:
wij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BWZ20_14875
DNA repair and recombination proteins [BR:
wij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BWZ20_14875
MMR (mismatch excision repair)
Other MMR factors
BWZ20_14875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
APY09507
UniProt:
A0A1P8S0Z2
LinkDB
All DBs
Position
3312855..3315182
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AA seq
775 aa
AA seq
DB search
MEKYLSQLNDAQLAPTLQKDGPMIVIAGAGSGKTRVLTYRIAYLMSQGVDAFNILALTFT
NKAAREMKGRIADIVGDSEAKNLWMGTFHSVFAKILRFEGHHLGFPSNFTIYDTQDAQKL
IGSIIKEMGLDKDIYKTKQVYGRISSYKNSLITVKAYFRNPELMEADAMSRRPKMGEIYA
AYVDRCFKAGAMDFDDLLLRTNELLTRFPAVLAQYQDRFRYILVDEYQDTNHSQYLIVRA
LSDRFQNICVVGDDAQSIYAFRGANINNILNFQKDYDDVKVYRLEQNYRSTKMIVGAANS
VIEHNKTKLDKIVWTANDIGEQVIVHRTMTDADEGRYVASTIWETKMNKQLQNSDFAVLY
RTNAQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDVTAYLRLILNTSDEEALKRVINYP
ARGIGQTTVDRLVVAANATGKTIYEIMKDIDSVSININNGTKNKLKDFVTLIESYKVMNQ
NANAFELAEHVAKTSGLIRELGKDGTPEGVTKLDNVQELLNGVRDFVEGQVEVADSTGSL
AEFLEDIALATDLDGDKGDPNHVALMTIHLAKGLEFPHVFIVGMEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEEQAYLTYTVSRYRWGKLIDAEPSRFIEEIDDEFINITTPLKEQR
FNPMLDASIFGDIEPNNVRFAKPKSPKFKKKETKKPEKFQISTPKKLKPVSETNTGSNLF
DTKLTVGNIVNHQRFGRGEVLKIEGAGGDLKAEIKFEGGTTKKLLLRFAKLEVIS
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaagtatctcagtcaacttaacgacgcacaattagcaccaacattacagaaagac
ggaccaatgattgttatcgctggtgcaggttctggtaaaacacgcgtactcacatatcgt
atcgcttatttaatgagtcaaggagtagatgcctttaatattttggcgctaacctttaca
aataaggcagctcgcgagatgaaaggtagaattgcagatattgttggtgatagcgaagct
aaaaatctttggatgggtacgtttcactctgtgtttgctaaaattcttaggtttgaaggt
catcatttaggttttccaagtaactttaccatttacgatactcaagatgcacaaaagctt
attggttccattataaaagaaatgggactcgataaggatatctacaaaaccaaacaggtt
tatggtcgtatatcttcctataaaaatagcctcattacagttaaggcttattttaggaat
ccagagctcatggaagcagatgccatgtcacgcaggccaaaaatgggagaaatatacgca
gcatatgtagaccgttgttttaaagctggtgctatggattttgatgatttgttattaaga
actaacgagttattgacgcgttttcctgcggtactggcgcagtatcaagatcgttttaga
tacattttggtagatgagtatcaggatacaaaccattcgcagtatcttatcgtaagagct
ttgtccgaccggtttcagaatatctgtgtggtaggtgacgatgcacaaagtatctatgcc
tttcgtggcgcaaatattaataacatcctcaatttccagaaggattatgacgatgtaaaa
gtctatagattagagcaaaactaccgttctacaaagatgattgttggagctgccaattct
gttatagaacacaataaaaccaagctcgataaaattgtctggacagctaatgatattgga
gaacaagtcattgtgcataggactatgacagatgcagacgaaggccgctatgtggctagt
actatttgggaaaccaaaatgaacaagcaattacaaaatagcgattttgcagtgctttac
cgaacaaatgcgcagtctcgtgctatagaagatgctttaagaaagcgtgatattccctat
agaatttatggtggattatctttttatcaacgtaaagagattaaagatgtaacagcttat
ttgcgtttaattctaaacacttcagatgaagaagctttaaagcgcgttattaattatcct
gcgcgaggcattggtcagactacggtagatcgtttggttgtggcagccaatgcaacagga
aagaccatttatgagattatgaaagatattgatagtgtatctatcaatattaataatggg
acgaagaataagttaaaggattttgtaacgttgatagaaagttacaaggttatgaaccaa
aatgctaatgcatttgaattagcagagcatgttgctaaaaccagtggccttatccgagag
ttaggcaaagatggcacacctgaaggtgttacaaaactcgataacgtacaggaattattg
aatggtgttagggattttgtcgaaggtcaggtagaagttgcagacagcacaggatctctg
gccgagtttttagaagatatcgccttggcaacagatttagacggtgataaaggcgatcca
aaccatgtggctttgatgactattcacttagcaaaaggtttagagtttcctcatgtgttt
attgttggtatggaagaagatttatttccaagtgccatgagtatgaacaccagaagtgag
cttgaagaagaacgtcgtttgttctatgtggcattaacaagagcagaagagcaagcgtat
cttacttatacagtttcgcgctacagatggggaaaactaattgatgcagaaccaagtaga
tttattgaagaaatagatgacgaatttataaacattacaactccgttaaaagaacagcgt
ttcaacccaatgctagatgcttcaatctttggtgatattgagcctaataatgtacgtttt
gcaaaaccaaaatctccaaagtttaaaaagaaagagaccaagaaacctgagaagtttcaa
attagtacgccaaagaagttaaagcctgtaagtgagaccaatactggatctaatttattt
gataccaagttgacggttgggaacatcgttaaccaccaacgttttggcagaggcgaggta
cttaaaattgaaggtgcaggtggtgatcttaaagctgaaattaagtttgaaggaggaact
accaaaaagctgcttttgcgttttgccaaattagaggttatttcttaa
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