Nanchangia anserum: H8R18_02065
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Entry
H8R18_02065 CDS
T06883
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
wik
Nanchangia anserum
Pathway
wik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H8R18_02065 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wik03021
]
H8R18_02065 (rho)
03019 Messenger RNA biogenesis [BR:
wik03019
]
H8R18_02065 (rho)
Transcription machinery [BR:
wik03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
H8R18_02065 (rho)
Messenger RNA biogenesis [BR:
wik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H8R18_02065 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
NACHT
AAA_25
ResIII
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QOX82167
LinkDB
All DBs
Position
452962..454701
Genome browser
AA seq
579 aa
AA seq
DB search
MTAHHQSELATMRVGELKALAASLGIRGTSRMRKGELAAVIAAAEATGAKPRPARAAATA
SPEETPSPAAERAAAHDQSENRDQAEESADAQSGQRRRRSPRQGEGERESGAVLDVKAAL
AEEHTDAPAASSGAQSLDEIELPDGDERAGRRERRRGRDDAGSRRGRRGRGRRDRNERTD
RGERTGEGRDRGEQRSAREDDEVLVPIGGVLDVESNHAFVRTSGFNPGQNDVYVTLGQVR
RWGMRAGDAVVGYVRPQGDQPNNRRQKYNALVRVESISGMSVEEARERPHFKDLVPLYPN
EQLRLETAPRPLAPRVIDMLAPIGKGQRGLIVSPPKAGKTIILQQIARAIHQNNPECKIL
VVLVDERPEEVTDMTRTVEGEIIASTFDRPASDHTRVAELAIERAKRLVELGHDVVVLLD
SITRLGRAYNLAAPASGRILSGGVDASALYPPKRFFGAARNVENGGSLTILATALVETGS
KMDEVIFEEFKGTGNMELRLSRQLADKRLFPAVDMDASSTRREELLLTKEELAIVWKLRR
MLSALDTQQAAEFVLSKLKETQSNAEFLMMLSKMGSMRD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacatcaccagtccgagctcgccacgatgcgcgtgggggagctcaaggccctc
gccgcgtcgttgggaatccgcggaacatcgcggatgcgcaagggcgagctggctgccgtc
atcgccgccgccgaggccaccggtgcaaagccgcgccccgcccgtgcagccgccaccgcg
tcgcccgaggaaacccccagccccgctgccgaacgcgcggccgcccatgatcagtctgag
aatcgcgaccaagcggaggaatcggccgatgcccagagcgggcagcgccgtcgccgcagc
ccgcgtcagggcgagggtgagcgcgagagcggtgccgttctcgacgtcaaggccgctttg
gccgaagagcacactgatgcgccggccgcctcgtccggtgcccagtccctcgacgagatc
gagcttcccgacggcgacgagcgcgcgggacggcgtgaacgtcgtcgcggccgcgacgac
gcgggctcgcgccgaggccggcgcggacgtgggcgccgcgaccgcaatgagcgcaccgat
cgtggtgagcgcaccggcgagggccgcgaccgcggcgagcagcggtctgcgcgcgaggac
gacgaggtactcgtgccgatcggcggcgtcttggacgtcgaatcgaatcacgcgttcgtg
cgcacctccggcttcaacccgggccaaaacgacgtctacgtgacgctgggccaggttcgc
cggtggggaatgcgcgccggggatgccgttgtcggctatgtgcgcccgcagggcgatcag
ccgaataaccggcgccaaaaatacaacgcgctcgtgcgcgtggagtcgatttcgggcatg
agtgtcgaggaggcacgcgaacgtccccacttcaaggacctcgttcccctctacccgaac
gaacagctgcgcctggagacggctccgcgtccgctcgccccgcgtgtcatcgacatgctc
gccccgattggcaagggccagcgcggcctcatcgtgtcgccgccgaaggccggcaagacc
atcatcctccagcagatcgcccgcgcgatccaccagaacaaccccgagtgcaagatcctc
gttgttctcgtcgacgagcgtcccgaggaagtcaccgacatgacgcgcacggtcgagggc
gagatcattgcctccacctttgaccgtcccgcttctgaccacacccgcgtcgccgaactc
gccatcgagcgggccaagcgcctggtcgagctcgggcacgacgtcgtcgttctgctggac
tcgatcacccgactcggtcgggcctacaaccttgcggctccggcgtcgggccggatcctc
tcgggtggtgtcgatgcctccgcgctctatccgcccaagcggttcttcggcgccgcccgc
aacgtcgagaacggcggctcgctgacgatcctcgcgaccgcgctcgtcgagacggggtcg
aagatggacgaggtcatcttcgaggagttcaagggcaccggcaacatggaactgcgcctg
tcgcgccagcttgccgacaagcgcctgttcccggccgtcgacatggatgcgtcctcgacg
cgacgcgaggaactcctcttgacgaaggaggagctggcgatcgtgtggaagctgcggcgg
atgctcagcgccctcgacacccagcaggccgccgagtttgtcctctccaagctcaaggag
acgcagtcgaatgcggagttcctcatgatgctgtcgaagatggggtcaatgcgcgactag
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