Nanchangia anserum: H8R18_02855
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Entry
H8R18_02855 CDS
T06883
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
wik
Nanchangia anserum
Pathway
wik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H8R18_02855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wik03019
]
H8R18_02855
Messenger RNA biogenesis [BR:
wik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H8R18_02855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
QOX82289
LinkDB
All DBs
Position
621140..622831
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AA seq
563 aa
AA seq
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MKPLYPDLTPPPPADPDSLRVVPLGGLGEVGRNMTVMEHRGKILLLDCGVLFPEEIQPGV
DLILPDFSYIAQRMDDVTALLLTHGHEDHIGAVPYLLRLREDIPIYGSKLTIAFLEAKLR
EHRLPTTHLHVVAEGDAIELDGYGCEFLAVNHSIPDALAIMIRTAAGNALLTGDFKMDQL
PLDGRITDLRGFARMGDEGVDLFMVDSTNAEVPGFVTSECEIGPVLKQVFRDAQRQIVVA
SFASHVHRVQQVLGAAAATGRKVCLIGRSMERNMRIAAEGGYLNIPEGILVDQREARDLP
PECRVYMATGSQGEPMAALSRMAQQNHRTVELAETDTVVLASSLIPGNENSVYRVINALM
RLGVHVVHRDNAKVHVSGHAAAGELLYAYNIIQPRNVMPMHGEIRHLIANGSLAVRTGVD
PDRVALAEDGVVVDLIDRRAHIVGQVPCEYVYVDGRSIGEIGEGQLKDRLTLGEEGFVSI
FAAVDAESGHLIAGPHITARGMAEDDAVFREVLGDVTTALANAAEPGNVDTYKMQQAARR
ALGRWIARRLRRRPMIVPVVVEV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcctttgtatccagacctgacgcccccgcccccggcggatcccgattcgctgcgc
gtggttcccctcgggggactgggcgaagtggggcgcaatatgacggtcatggagcatcgc
gggaagatcctgctgctcgactgcggtgtgctcttccccgaggagatccaacccggtgtg
gacctcatcctgcccgacttcagctacatcgctcagcgcatggatgatgtgacggctctg
ctgctcacgcacggtcacgaagaccatatcggcgcggtgccctatctgctgcggttgcgc
gaggacattcccatctacggttcgaagctgacgatcgccttcctcgaggcaaaactgcgc
gagcaccggctgccgaccacgcaccttcacgtcgtcgccgagggcgacgccatcgaacta
gacggctatgggtgtgaattcctcgccgtcaaccactccattcccgacgccctcgccatc
atgattcgcacggcagctggcaacgccttgctgactggcgatttcaagatggatcagctc
ccccttgacggtcgcattacggatcttcgcggatttgcccgcatgggtgacgagggcgtg
gacctgttcatggtcgattcgacgaacgctgaggtccccggtttcgtcacctcagaatgc
gaaatcggtcccgtcctcaaacaggtgttccgcgacgcgcagcgccagatcgtcgtggcc
tcctttgcctcgcacgtccaccgcgtccagcaggtgctcggcgcagccgcggcgacgggg
cgcaaggtctgtctcatcgggcggtcgatggaacgtaacatgcgcatcgccgcggagggg
ggatacctcaacattcccgaggggatcctcgtcgaccagcgtgaagctcgagatctgccg
cccgagtgccgcgtatatatggcgacggggtcccagggcgagccgatggcggcgctctcg
cgcatggcccagcaaaatcatcggaccgtcgaattggcagaaaccgacaccgtcgtgttg
gcttcttcgctcattcccggcaacgagaattccgtataccgcgtcatcaacgccctcatg
cgattgggagtccacgtcgtgcaccgcgataacgcgaaggtgcacgtgtcggggcacgcg
gcggcgggtgagctgctgtatgcctacaacatcatccagccgcgcaacgtcatgcccatg
cacggcgagatccgccacctcattgccaatggttctctggcggttcgcacgggggtcgat
cccgatcgggtggctctggcagaagacggcgtcgtcgtcgacctcatcgacaggcgcgcc
cacatcgtcggccaggttccgtgcgagtacgtctacgttgatggtcgctcgatcggtgaa
attggcgaggggcagctgaaagaccggctgaccctgggcgaagagggattcgtgtcgatt
tttgccgctgtggacgccgagtccgggcacctcatcgccggcccacacattaccgctcga
ggaatggccgaagacgacgccgtgttccgcgaggtcctcggcgacgtgacgactgcgctt
gccaacgccgccgaacccggcaatgtcgacacctacaagatgcagcaggcggccaggcgc
gcgctcggacgttggatcgctcgccggctgcgtcgccgtcccatgatcgttcccgttgtt
gtcgaggtatag
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