Nanchangia anserum: H8R18_03105
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Entry
H8R18_03105 CDS
T06883
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
wik
Nanchangia anserum
Pathway
wik03030
DNA replication
wik03430
Mismatch repair
wik03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H8R18_03105 (dnaE)
03430 Mismatch repair
H8R18_03105 (dnaE)
03440 Homologous recombination
H8R18_03105 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wik03032
]
H8R18_03105 (dnaE)
03400 DNA repair and recombination proteins [BR:
wik03400
]
H8R18_03105 (dnaE)
Enzymes [BR:
wik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H8R18_03105 (dnaE)
DNA replication proteins [BR:
wik03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H8R18_03105 (dnaE)
DNA repair and recombination proteins [BR:
wik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H8R18_03105 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QOX82326
LinkDB
All DBs
Position
673055..676606
Genome browser
AA seq
1183 aa
AA seq
DB search
MSASSDFVHLHVHTDYSMLDGAAQIGKLVAEAKRLGQRALAITDHGYLFGAYEFYAAAKA
AEIKPIIGLEAYVTPGTSRFDKETRVRWGDESQASDDVSARGAYTHMTLLARTTQGMHNL
FRLGSQASLDGQMNKWPRADRDLLERYGNGLIGTTGCPSGEVQTRMRLGQFDEARRCAEE
LQDIFGKDYFYVELMDHGLDIERRVRTELLDLAKHLGAPLLATNDSHYVTEADQPTQDAL
LCINSGSRLSDPDRFTFDGTGYYLRPGDEMHRLFADLPEACMNTLRVAEQCEVEFHTVAD
GASYMPQFPVPEGEDETSWFIKEVERGLNKRFPDGVPEAERRQAEYECDVIERMQFPGYF
LVVADYINWAKDQGIRVGPGRGSGAGSMVAYAMGITELNPLKYGLMFERFLNPERVSMPD
FDVDFDERRRDEVIDYVTERYGADKVSQVVTYGKIKAKQALKDSARILSKPYSVGEQLTK
KMPKAIMGKDMSVSGMFTPSDPRYSEAEEFRRYYAENEAELGPVVNLARELEGLTRQWGV
HACAVIMSSHTLTDIIPMMRRVKDGAVITQFDYPTCETLGLLKMDFLGLRNLTVLSDAQD
NIVANNKPAVDLESVPLDDQATFDLLSSGETLGVFHLDSSGMRSLLRLMKPTHFNDISAV
GALYRPGPMGAQSHTNYALRKNGRQQITPIHPTLEEPLNEILSETYGLIVYQEQVMAIAQ
KLAGYSLGEADLLRRAMGKKKKAEMDKQFATFKAGMLERNYPEEAITTLWEILVPFSSYA
FNKSHSAAYGLVSYWTAYLKANYPAEYMAALLTSTGNNRDKLAMYLRECRRMDIDVLVPD
INLSQANFSPVGHSIRFGFSAIRNVGANVVDAIIATRQEKGDFTSFTDFLQKVPQAVCNR
RTVESLIKAGVFDSLGMTRRALHARHEEAVSSMVGLKRNEEIGQFDLFGALDEGPADVFT
LEIPEMPEWDKKDKLDFERQMLGLYVSDHPLNGLQYVLNRNSDHEVADIITDGGAVPEGA
RVRLCGLIAGIERKVTKKSGSPMAIITLEDLSGSIEATFFPTQYETFATYLTDDAIVSVV
GRVKYTDEGSASLVAQELTVPNVAMGSDGPLVVTMRAERCTRQVAEDLGEILRNHPGGSV
VRMRLVSSSSVTTVQLDDALRVNSEASLYSELKALLGRNCLEA
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctcgtccgacttcgtccacctccacgttcacaccgactattcgatgctggat
ggggcggctcagatcggcaagctcgtcgccgaggccaagcgcctcgggcagcgggcgctc
gcgattaccgatcacggctacctgtttggtgcctatgagttttacgcggctgccaaggcc
gccgagatcaagccgatcatcggcctcgaggcctacgtcacgcccggtacctcccgtttc
gacaaggagacgcgcgtgaggtggggtgatgagtctcaggcctccgacgatgtgtcggct
cgcggtgcgtacacccacatgacgctgttggcacgcacgacccaggggatgcataacctc
tttcggttggggtcgcaggccagtctcgacgggcagatgaacaagtggccgcgcgctgac
cgcgacctgctcgaacgctacggcaacggcctcatcggcacgacggggtgcccgtctggc
gaagtgcaaacgcgcatgcggctcggccagttcgacgaggcacgtcggtgtgccgaggag
ctgcaagacatctttggcaaggactatttttacgtcgagctcatggaccacggactcgac
atcgaacggcgcgtgcgcaccgagctgttggacctggccaagcacctgggcgccccgctg
ctggcaacaaacgattcgcactacgtcaccgaggcggaccagccgacccaggacgccttg
ctgtgcatcaactcggggtcgcgtctgtccgatcccgatcgctttacgttcgacggcacc
ggctactacctgcgtcccggcgacgagatgcatcggctgtttgccgacctgcccgaagcg
tgcatgaatacgctgcgcgtggccgagcagtgcgaggtcgagttccacaccgtcgccgac
ggtgcatcctacatgcctcaattccccgtgcccgagggcgaggacgagacatcgtggttc
atcaaggaagtcgaacgcggcctcaacaaacgtttccccgatggcgtccccgaagccgag
cgacgccaggccgaatacgagtgcgacgtcatcgagcgcatgcagttcccgggctacttc
ctcgtcgtcgccgactacatcaactgggcgaaggatcagggcattcgcgtgggaccgggg
cgtggctcgggtgcgggatcgatggttgcctacgcgatgggaatcaccgaactcaacccg
ctcaaatacggtctcatgttcgagcggttcctcaaccccgagcgcgtctcaatgcccgac
ttcgacgtcgacttcgacgaacgccgccgcgacgaggtcatcgactatgtgaccgaacgc
tacggcgcggataaggtttcccaggtcgtcacctacggcaagatcaaggcgaagcaggcg
ctcaaggactctgcgcgtatcttgtcgaagccctattcggtgggcgagcagctgacgaag
aagatgcccaaggcgatcatgggcaaggacatgagcgtgtcggggatgttcaccccgtcg
gatccgcgctattccgaggccgaggaattccgccgctactacgccgagaacgaggccgag
ctggggcccgtggttaatctcgcgcgcgagcttgagggtctgactcgccagtggggcgtc
cacgcgtgcgccgtcatcatgtcctcgcacacgctcaccgacatcatccccatgatgagg
cgcgtcaaagacggtgccgtcatcacccagttcgattaccccacgtgtgagacgctcggc
ctgctgaagatggacttcctggggttgcgtaacctcacggttctctcggatgctcaggac
aacatcgtcgccaacaataagccggccgtcgacctggaatcggtgccgctggatgaccag
gcgaccttcgatctcctctccagcggtgaaacgctgggggtgttccacctcgatagctcg
ggcatgcgctccttgctgcggttgatgaagccgacgcactttaacgacatttcggccgtg
ggcgcgctgtatcgacccggaccgatgggggcccagtcccacacgaattacgcgctgcgc
aagaacggtcgccagcagatcacgccgattcacccgacgctggaagaacccctcaacgag
atcctgtcggaaacgtatggcctcatcgtctaccaagagcaggtcatggcgattgcccag
aaactcgccgggtattccctcggcgaagccgacctgttgcgtcgcgcgatgggcaagaag
aaaaaggccgagatggacaagcagttcgccacgttcaaggcgggcatgctcgagcgcaac
tatcccgaagaggcgatcacgactctgtgggaaatcctcgtcccgttctcgtcctacgcc
ttcaacaagtcgcactcggcggcttacggcctcgtgtcctattggacggcctacctcaaa
gcgaactacccggccgaatacatggccgccctgctcacctcgacgggaaataaccgcgac
aagctggcgatgtacctgcgcgagtgccggcgcatggacatcgatgtcctcgttcccgac
atcaatttgtcgcaggccaacttctcgccggtcggtcattcgatccgattcgggttctcg
gctatccgcaacgtcggggcaaatgtcgtcgacgccatcatcgcgacccgccaggaaaag
ggcgacttcacgtcgtttaccgacttcctgcaaaaggtgccgcaggcggtctgcaaccgc
cgcaccgtcgagtccctcatcaaggccggagtctttgactctctgggaatgacgcgtcga
gcccttcatgcccgtcacgaggaagcggtgtcgtcgatggtcggtctcaagcgcaacgag
gagatcggtcagtttgatctgtttggcgccctcgatgagggaccggcggatgtgttcacc
ctcgagattcccgagatgcccgagtgggacaaaaaggacaagctcgattttgagcgccag
atgctcggcctgtacgtgtcggaccacccgctcaacggcctgcaatacgtcctcaatcgc
aacagcgaccacgaggttgccgacatcatcaccgatgggggagcggttcccgagggtgcg
cgcgtgcgcctgtgcgggctcatcgcaggtattgagcgcaaggtgacgaagaaatcggga
tctccgatggcgatcatcacgctcgaggacctgtcggggtcgatcgaggcgacgttcttc
cccacccagtacgagacctttgccacctacctaaccgacgacgccatcgtctcggtcgtc
gggcgagtgaagtacaccgacgagggatcggcctcgctcgtcgcccaggagctcacggtg
ccgaacgtcgcgatgggctcggatgggccgctggtcgtcacgatgcgcgcggagcgatgc
acccgacaggtggccgaagacctcggcgagatcctgcgcaaccaccccgggggatcggtc
gtgcgcatgcgtctcgtttcgtcgtcgagcgtgacgacggtgcaactcgatgatgcgctg
cgggtgaacagcgaggcgagcctgtattccgagctcaaggccctgctcggacgaaactgc
ctagaggcgtga
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