Nanchangia anserum: H8R18_04420
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Entry
H8R18_04420 CDS
T06883
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
wik
Nanchangia anserum
Brite
KEGG Orthology (KO) [BR:
wik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wik03019
]
H8R18_04420
Enzymes [BR:
wik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
H8R18_04420
Messenger RNA biogenesis [BR:
wik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
H8R18_04420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
SH3_HelY
DEXQc_Suv3
AAA_22
nSTAND3
MTR4-like_stalk
MnmE_helical
DUF7432
Motif
Other DBs
NCBI-ProteinID:
QOX81081
LinkDB
All DBs
Position
956248..958965
Genome browser
AA seq
905 aa
AA seq
DB search
MSPARRPRRRSTGTEGADEDLSPAQRYAAFTRRQAETSPRLRFFLDGLDFFPDDYQLDAM
RALDRGHGVLVAAPTGAGKTLIAEYALTCAVDAGERAFYTTPIKALSNQKYRDLCARFSE
DTVGLATGDVTINAHAPIVVMTTEVARNMLYRGDSRVSDLGIVVMDEVHYLADHFRGPVW
EEVILHLPDYVRIVSLSATVSNAEEFGEWLREVRGDTDVIVSERRPVPLLQHMCVGGQIY
PLFADGGSSKLNRALTSTISGSRPRPGHRRHRERRPIRRSSIVEIVGDLAEKQMLPAICF
IFSRLGCDQTVSALLTSGLLLTTPAEAAQIGAHITHACADLDHATRKALRLAEFQAAAEA
GIAAHHAGMIPLLKDLVEELFTAGLLKVVCATETLALGINMPAKTVVIPSLEKWNGRERV
RLTPGQYTQLTGRAGRRSLDTVGHAVVCYQRDQPPEVVASLASKRSYALVSAFHPTYNMS
VNLLMRMSVSEARSLMERSFAQFQADRAVVGKAAYAARLDRKIARAAESLTCSRGDFLAY
VRLTQRLRDAEHARPNAAQRDEARDLITAARVGDVLAYRDDDGAQRTGLVVAQSEDDGLF
RLDVLTRKAGVLTLSARNAPMSVLGHLDLAGLRATRPRDRQRLASQLRRAEREWGWSPSP
FAPTVEQLREDVRTHPCHRCPDRKAHQAKARTYIRRMRKREGVDRDIARQTSSIGTTFER
VREVLTVLGYLTEDGTLTDAGRLLALIHTEYDLLLSEVIRAGALTKLGAADLAGALSACI
YVPRSETTGESIQATRHRSALHRALGAIEDAKARIGAVESEAQAPRTGQPDPAMARAVTR
WASGAGLEDILDQVEGLTPGDFVRHIKQVIDLLRQLRLAAPDMATSATAAISALRRGVVA
WGDPR
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
gtgagtccggcgcgacgcccccggcggcgctcaacggggaccgagggagcagacgaagac
ctctcgccagcccagcgctacgcggccttcacccgtcgccaggctgagacttcgcctcgt
ctgcgcttctttctcgacggcctcgacttctttcccgatgactaccagctcgacgcgatg
cgtgctctcgatcgcggccacggcgtcctcgtggcggcaccgacgggagccggcaaaacc
ctcatcgccgaatacgcgctgacgtgtgcggtggacgcgggggagcgggcgttctacacg
acgccgatcaaggcgctatcgaaccagaaatatcgcgatttatgcgcgcgttttagtgaa
gacaccgtcgggttggccacgggtgacgtgacgatcaatgcccacgccccgatcgtcgtc
atgacgaccgaggtggcacgcaacatgctctatcgcggcgattcgcgcgtgagcgatctc
ggcatcgtcgtcatggacgaggtccactacctggccgatcacttccgcgggccggtgtgg
gaggaagtcatcttgcacctcccggactacgtgcgcatcgtctcgctgtcagcaacggta
tccaatgccgaagaattcggcgaatggctgcgcgaagtccgcggcgacaccgacgtcatc
gtgtcggagcgccgcccggtcccgctgctgcaacacatgtgcgtgggcgggcagatctac
ccgctttttgccgacggcggttcctcgaagctcaaccgggcactgacatcgacaatttcc
ggttcgcgcccgcgtccagggcaccggcgccaccgcgagcggcggcctatcaggcgctcg
tcgatcgtcgagatcgtcggcgatttggccgagaaacagatgcttcccgccatctgcttc
attttttcgcgtctcgggtgtgaccagacggtctcggcgctgctgacgtcggggctcctg
ctcacgactcccgccgaagccgcgcagatcggtgcccacatcactcacgcatgcgccgat
ctcgaccacgccacgcgcaaggcgctgcgcctggccgagtttcaagccgcggccgaggcc
gggatcgccgcccaccacgccgggatgattcccctgttgaaagatctcgttgaggagctc
tttaccgccggcctcctcaaggtcgtctgcgcgaccgagacgctcgccctcggcatcaac
atgccggcgaagaccgtcgttatcccctcactagaaaagtggaacggccgcgagcgcgtg
cgcctgaccccggggcagtacacccagctgacggggcgggcggggcggcgctcgctcgac
acggtgggccacgccgtcgtgtgttatcagcgcgaccagccgcccgaggtggtcgcgtcg
ctggcgtcgaagcgctcctacgcgctggtgtcggcctttcatccgacctacaacatgagt
gtcaacctcctcatgcggatgtcggtgagcgaggcgcgctcgctcatggagcgttcgttt
gctcagtttcaggccgatcgcgcggttgtcgggaaggcggcctatgcggcccgcctcgat
cgcaagatagcgcgggcggctgagtcgctgacgtgctcgcgcggtgatttcctcgcctac
gtccgcctcactcagcggctgcgcgatgcggagcatgcccgccccaacgcggcgcaacgc
gacgaggcacgtgatctcatcacggcagcacgcgtcggcgacgtccttgcctatcgcgat
gacgacggcgctcagcgcacgggtctcgtcgtcgcgcagagtgaggacgatggcctgttt
cgcctcgacgtcctcacccgcaaggccggcgtgctcaccctgtcggctcgcaacgccccg
atgtccgtcctcgggcacctggatctggcaggcctgcgggcgacgcggccgcgagatcgc
cagcgcctggcctcgcagctgcgccgggccgaacgtgagtgggggtggagcccatcgcct
ttcgcgcccacggttgagcagttgcgcgaggacgttcgcactcacccgtgtcatcgctgc
cccgatcgcaaggctcatcaggcgaaagcacgcacctacatcaggcggatgcgcaagcgc
gagggagttgatcgcgatatcgctcgacagacatcgtcgatcgggacgacgtttgagcgc
gtgcgggaggtcttgacggtgctcggctacctcaccgaggacgggacgctcaccgacgcc
ggtcgtctgctcgccctcattcacaccgaatacgacctgctgttgagcgaggtcatccgt
gcgggtgcactgaccaagctcggagccgccgacctcgccggggcgctttcggcgtgcatc
tacgtgccgcggtccgagacgacgggggagagcattcaggcgacgcgccaccgctcggcg
cttcatcgcgcgctgggcgccatcgaggacgcgaaggcccgcatcggagccgtcgaatcc
gaggcccaggctccgcgcacgggccaacccgatccggcgatggcgcgcgccgtcacccgg
tgggcgagcggcgccggtctcgaggacatcctcgaccaggtcgaggggctgacgccgggc
gacttcgtgcgccacatcaaacaggtcatcgacttgctgcgtcagctccgcctcgccgcc
ccagatatggcgacgagcgcgacggccgcgatttccgcgctgcgtcgcggcgtcgtcgcg
tggggggatccccggtga
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