Nanchangia anserum: H8R18_06750
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Entry
H8R18_06750 CDS
T06883
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
wik
Nanchangia anserum
Pathway
wik03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wik00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H8R18_06750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wik03021
]
H8R18_06750
03400 DNA repair and recombination proteins [BR:
wik03400
]
H8R18_06750
Enzymes [BR:
wik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H8R18_06750
Transcription machinery [BR:
wik03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H8R18_06750
DNA repair and recombination proteins [BR:
wik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H8R18_06750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QOX81454
LinkDB
All DBs
Position
complement(1439381..1443286)
Genome browser
AA seq
1301 aa
AA seq
DB search
MTDANAFDKLHIGLATAENIHSWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTRSNVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLNL
APKDLEKVIYFAAYMITEVDEEARHQDLPSLQNELDLEKKNIEDRTEAALMKRSEKLEKD
LATLEAEDAQAGAKDKVRKAAEKELTQIRRKGARDIEQLEQVFDRFKDLKVGDLEGNELL
YRNMVARYGIYFKGDKGAAAVKKRLEDFDLKAEAAALREVSETGTGQRKTRALKRLRVVN
AFLSTGNSPVSMVLDRIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVAGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLLLHQCGLPKQMALELFKPFVMKRLVERQEAQNVKAAKRMVERQR
DAVWDVLDEVITEHPVLLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLGAEAQAEARILMLSSNNILKPSDGRPVTMPAQDMIIGVYHLTADPDPALPVPH
DAEGNEVVPAFASLGEAIMAYDRRDLDINATARIRLDPDTVPPAGWQAPEGWTEGDPVEL
ETSIGRAFFNEALPVDFPFVNEQVGKKQLGNIVNTLAESYDKGNVAASLDALKSTGFHWA
TWSGITISVADVVEPPEKPEILADYEERAANVQDQYDTGFIDADDRYREMVDIWNECTAK
VAEAMRKNFDARNQVFRMVNSGARGNWDQVRQIAGMRGLVADPKQKLIERPIKSNYLSGL
TVLEYFIATHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREMDCGTRRGLAMPIGTL
GEDGSVTKLEWVETTAYGRTLAKDAVTEAGDVVFAKGTDLGDKEITALVDAGVSEITVRS
VLTCESETGTCAACYGRSLATGKQVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAAGSS
DITQGLPRVQELFEARTPKGEAIMTEAAGRVKIVDEPPAQRKVVVVRDDGQDDLEIEISR
RMKLLVSEGDHVAVGQQLTEGRLDPKKVLRIRGVNATQRQLVNEVQEVYRSQGVDIHSKH
IEVIVRQMLRRVTVLASGDTDLLPGTLVDSMRFRSENRRVVSQGGQPASGRPELMGITKA
SLATDSWLSAASFQETTKVLTDAAMNAKEDPLVGLKENVILGKLIPAGTGLSTYQSATVE
PTDEALAAMGWTEKDFRMPEFEDAADFLKDITFGDSFGIDL
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcaaacgccttcgacaagctccacattgggttggcgaccgccgagaacatt
cacagctggtctcacggcgaggtgaagaagcccgagaccatcaattaccgcacgctcaag
ccggaaaaggacggcctgttctgcgagcggatctttggcccgacgcgcgactgggagtgc
gcgtgcggcaagtacaagcgcgtgcgctacaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgctcgaacgttcgtcgtgagcgcatgggccacatcgagctggccgctccc
gtgacgcacatctggtacttcaagggcgtgccctcgcgcctggggtacctgctgaacctg
gcgccgaaggacctcgagaaggtcatctacttcgccgcctacatgattaccgaggtcgac
gaggaggcccgccaccaggacctgcccagcctgcaaaacgagctggacctcgagaagaag
aacatcgaggatcgcaccgaggcggcgctcatgaagcgctcggaaaagctcgagaaggac
ctcgcgacgctcgaggccgaggacgctcaggccggcgccaaggacaaggtccgcaaggcg
gccgagaaggagctcacccagattcgtcgcaagggcgctcgcgacatcgaacagctcgag
caggtcttcgatcgcttcaaggacctcaaggtcggcgatctcgagggcaacgagctgctc
taccgcaacatggtggcccgctacggcatctacttcaagggtgacaagggcgcggccgcg
gtgaagaagcgcctggaggacttcgacctcaaggccgaggccgcggcactgcgcgaggtc
tccgagaccgggaccggtcagcgcaagacgcgcgccctcaagcgcctgcgcgtcgtgaac
gcgttcctctccacggggaactcacccgtgtcgatggtgctcgaccgcatccccgtcatc
ccgccggacctgcgtccgatggtgcagctggatggtggccgcttcgcgacgtcggatctc
aacgatctctaccgccgcgtcatcaaccgcaacaaccgtctcaagcgtctgctcgacctg
ggcgcgcccgagatcatcgtcaacaacgagaagcgcatgcttcaggaatcggttgacgcc
ctgttcgacaacggccgccgcggccgtcccgtcgcgggtccgggcaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcaggggcgcttccgccagaacctgctgggcaag
cgcgtcgactactcgggtcgttccgtcatcgtcgtcggcccgcagctgctgctgcaccag
tgcggcctgcccaagcagatggcgctggagctgtttaagcccttcgtcatgaagcgcctg
gtcgagcgccaggaggcccagaacgtcaaggcggccaagcgcatggtcgagcgccagcgc
gacgccgtgtgggatgttctcgacgaggtcatcaccgagcacccggtgttgctcaaccgc
gcccccacgctgcaccgcctgggcattcaggccttcgagccggtcctcgtcgagggcaag
gcgatccagctgcacccgctcgtgtgtggcgccttcaacgccgacttcgacggtgaccag
atggccgttcacctgccgctgggtgccgaggcgcaggctgaggcccgcattctcatgctg
tcgagcaacaacatcttgaagccgtctgacggccgcccggtgacgatgcccgcgcaggac
atgatcatcggcgtctaccacctcacggctgaccccgacccggccctgccggtgccgcac
gatgccgagggcaacgaggtcgtgccggcgttcgcctcgctgggcgaagccatcatggcc
tacgaccgccgcgacctcgacatcaacgcgaccgcgcgcattcgcctcgatcccgacacc
gtgcctccggccggctggcaggcccccgagggctggaccgagggcgaccccgtcgagctg
gagacctcgatcgggcgcgcgttcttcaacgaggcgctccccgtcgatttcccgttcgtc
aacgagcaggtcggcaagaagcagctgggcaacatcgtcaacacgctggccgagtcctac
gacaagggcaacgtcgcggcgtcgctggacgcgttgaagtcgaccggcttccactgggcg
acgtggtcgggcatcaccatttcggtggccgacgtcgtcgagccgcccgagaagcccgag
atcctcgccgactacgaggagcgtgcggctaacgttcaggaccagtacgacaccggtttc
atcgatgccgacgaccgctaccgcgagatggtcgacatctggaacgagtgcacggccaag
gtcgccgaggcgatgcgcaagaacttcgacgcgcgcaaccaggtgttccgcatggtcaac
tccggtgcccgtggtaactgggaccaggttcgccagatcgccggcatgcgtggcctcgtg
gccgacccgaagcagaagctcatcgagcgcccgatcaagtcgaactacctgtcgggcctg
acggttctcgagtacttcatcgccacccacggtgcccgtaagggtctggccgacacggct
ctgcgtaccgccgactcgggttacctgacgcgtcgtctcgttgacgtgtctcaggacgtc
atcgtccgcgagatggactgcgggacccgccgcggcctggcgatgccgattggcacactc
ggcgaggatggctcggtcacgaagctcgagtgggtcgagacgaccgcctacgggcgcacc
ctggcgaaggacgcggtcaccgaggccggagacgtcgtcttcgccaagggcaccgacctg
ggcgacaaggagatcaccgcgctcgtcgacgccggcgtatccgagatcaccgtgcgctcc
gtgctcacgtgtgagtccgagacgggcacgtgcgccgcgtgctacgggcgttcgctggcc
acgggtaagcaggttgacatcggcgaggccgtcggcatcatcgccgcccagtcgatcggt
gagcccggcacgcagctgacgatgcggacattccacaccggtggtgccgcgggttcctcg
gacatcacgcagggtctgccgcgcgttcaggagctcttcgaggcccgcaccccgaagggc
gaggcgatcatgaccgaggccgccggccgggtgaagatcgtcgacgagccgccggctcag
cgcaaggttgtcgtcgtgcgcgacgacggccaggacgacctcgaaatcgagatctcgcgc
cgcatgaagctgctcgtctccgagggcgatcacgtcgcggtcggccagcagctcaccgag
ggccgcctcgacccgaagaaggtcctgcgcatccgtggcgtcaacgccacccagcgccag
cttgtcaacgaggtgcaggaggtctaccgctcccagggcgtcgacatccactccaagcac
atcgaggtcatcgtccgccagatgctgcgtcgcgtgaccgtcctcgcctcgggcgacacc
gacctgctgccgggcaccctcgtcgattcgatgcggttccgctccgagaaccgccgcgtc
gtgtcgcagggcgggcagccggcgtcgggccgtcccgagctcatgggcatcaccaaggcc
tcgttggcgacggattcgtggctgtcggccgcgtcgttccaggagacgacgaaggtgctg
acggatgccgcgatgaacgccaaggaggacccgctggtcggcctcaaggagaacgtcatc
ctcggtaagctcatcccggcgggtacgggcctgagcacgtaccagtcggccaccgtcgag
ccgaccgacgaggcgctggcggcgatgggatggaccgagaaggacttccgcatgcccgag
ttcgaggatgcggcggacttcctgaaggacatcaccttcggcgattccttcggaatcgat
ctctaa
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